Gene detail

Detailed information of TcoG035165.mRNA1 in Tubastraea coccinea

Genomic Location: ptg003298l:219417...228544
NR annotation: no NCBI-NR hit recorded
Species Tubastraea coccinea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

TcoG035165.mRNA1

aagacatttaatcatgttttacgcgacgaaatacgccaagatttttgtttttggcccgccattttgaatttgaacaaaacagagaaggccctggggacgaggttgGAGACGGATTTCAACATGGCGGACGATCCGGAACTTACATTGAACCTCACTTATAAAGAGCTTCAAGAGCGATTTGTGAGTGATTTAAACGGAACATCTCTTGTTGAAATCAGTAAAGTTGTTAGTACTGCGCCAGTAGCCGTTCTCTTAAGGACATTTATATTCAGTGTGCTGTTTTCGAACATAGAAACTAAGCTCTCAAAATGGCTGTTTTGTTGCATGGTTTTTCTGATGGATTACATCACCTTAACAATTCCAGTCCTTCTGGGATTTACTGTGCTTGCCGATCACATCAACGCATTAATTATGACTTGTTTAGCTCTATCATTGGGACTCTTATTTTTGTGCTCTGTAAAAAGAAACAGAGCGCAGACATCTCAGCATTCCCAAACTATCTTGTCTTCTGACATGTCCAGAAAAAGACCCTTCATTGGCATCTTCAGAGCATATGTATTGATTGCCACAGCTGTTGCTATACTTGCTGTGGATTTTGCCATCTTCCCCCGACGTTTTGCAAAAGCTGAAACCTTTGGAAGTGGAATCATGGATATTGGAGTTGGATCATTTGTAATTTCAAACGCCATTGTGTCGCCGGAGGCAAGGGGTGTTTTACTAGGTGATACTGGTTTTATTTCACCAGTGTTCAGGTCTTTAAAGTCTTCATTACCGCTCCTAGTGCTTGGAGTAATGAGGTTTATTTCTGTGAAAGGTACAGATTATCAAGAACATGTGAGCGAGTATGGTGTTCATTGGAACTTTTTCTTTACCTTGTTCTTTGTAAGGGTTTTGTCAACAGTGCTTATTAGACTTATACCAGGTCGACGCTGGTATGGAATATCAGGACTTGCACTTGCTTCACTTTATCAACACCTGCTGAGCTGCGCTGGTTTGAGGTCTTTTGTGTTGCATGGTAGACATGAAAGTAATTCACGCCAAGGTCTTGTGGATGCTAACCGTGAAGGACTTTGTTCCTGTACTGGGTATTTAGCTCTGTACCTTCTTGGCGTTCAGTTAGGAAGATTCATCTTTCAAAAAAGGAGCACTGTTGGGCAGTGGATAAAAGCTTTGTTTGTCCTTATCACAGCAGATGTTGTGTTCTATCTTTTGGTTGAAGCATCTCAGCAGTTCATCAGTCCCATTTCCAGAAGAATGGCGAATTTATCCTTTGTATTGTGGCAGGTAGCATACAACATTCAGCTTCTCTCAAGTTTCTTGTTTTGCGACATTCTAATAACCGCTGCGAACAACACAGGCCTGCTTGAAGGCGCAGTTACTGGAGGATGCCAAGTTTGCTATCCAAACAGGATCCCGGATGCAGATCCAACCAAGTTATCACAGACGGAGAAGACGCGACTTTGCACATGCCTTTTAGCAGCTATAAATCGAAACCAACTGTTGTACTTTTTGCTCTCTAATTTGTTAACGGGAGCCGTTAACTTTTCCGTACAAACTATATTTTGTTCTTCCGTGAAAGGATTTTTGGTAGTTTGTTCTTACTTATTCGTGTTAAATTTCTTAATTTCGTTCTTACACTTACGCGGAAGAACCTTCAAATTTTAGTGAAAGTAATAAAGATAGGTGCTTCCCAGACAGGACTTCTAGGTAGCCATTTCCAGGCGTTTAGATATGGTGGGGAGCGGCGTGAAAGAACAATTTCGAGTGAAAAAAAGGCGCCCATTTCCCGCCGTTAGCACTCACAATATCTCAGTGTAGTTTTCCTGTTTTAGTGTGTTGTTTTGTGGACAAAGACATGTACTTTTTCTTGTGGGAATCTGCAAGCAAGCTACAGAACGTTGAACTAATGTGTCTAAGCCTGTGAATTCTGAGATATGCTATTTAAATGCTCTTCAaacactcattaataattcataagcatattagcctatcacacgacgtaaatccatcacgtgcatggacctttatacctgg

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06423 all species →	GWT1	GWT1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009447 all species →	Family	Phosphatidylinositol anchor biosynthesis protein PIGW/GWT1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20661 all species →	PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS W PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0006506 all species →	Biological Process	GPI anchor biosynthetic process	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016746 all species →	Molecular Function	acyltransferase activity	Interproscan
GO:0032216 all species →	Molecular Function	glucosaminyl-phosphatidylinositol O-acyltransferase activity	Interproscan
GO:0072659 all species →	Biological Process	protein localization to plasma membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05283	PIGW; glucosaminylphosphatidylinositol acyltransferase	EC:2.3.-.-	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	ko00563	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.