Gene detail

Detailed information of XP_001624503.2 in Nematostella vectensis

Genomic Location: NC_064038.1:7126837...7128627
NR annotation: XP_050518547.1, polyubiquitin-C isoform X2 [Diabrotica virgifera virgifera]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P0CH28	Polyubiquitin-C OS=Bos taurus OX=9913 GN=UBC PE=1 SV=1
P0CG66	Polyubiquitin-C OS=Gorilla gorilla gorilla OX=9595 GN=UBC PE=3 SV=1
P0CG48	Polyubiquitin-C OS=Homo sapiens OX=9606 GN=UBC PE=1 SV=3

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_Other
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_PIM

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00240	ubiquitin	Ubiquitin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR000626	Domain	Ubiquitin-like domain	Interproscan
IPR050158	Family	Ubiquitin and ubiquitin-like	Interproscan
IPR019954	Conserved_site	Ubiquitin conserved site	Interproscan
IPR019956	Domain	Ubiquitin domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10666	UBIQUITIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0019941	Biological Process	modification-dependent protein catabolic process	Interproscan
GO:0031386	Molecular Function	protein tag activity	Interproscan
GO:0031625	Molecular Function	ubiquitin protein ligase binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08770	UBC; ubiquitin C	-	Ubiquitin system	ko04121	deepkoala