Gene detail

Detailed information of XP_001627844.1 in Nematostella vectensis

Genomic Location: NC_064036.1:16314579...16317127
NR annotation: XP_001627844.1, D-arabinitol dehydrogenase 1 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_001627794.3

TCGCGGGCTCATGAGCCTAAACCACACTCAGTTTATTCATATTTCTTAGGTCGTGATTTTCTATTGCCAAATGCATCCTACCGGTATACTATGAACAACGCTGTTCAGCTTTGGGACAATCACCTCTCGGTGATCACACGACCCACTCCCCATGTTCAGTCGCCTAGGGATGTCGTGGTGAAAATAGCATATTCCGCAGTCAGTGGGACAGACTTGCATGTTCTCGAGGGGAGAATTGATTGCGCGAAATCTATCATTTTAGGTCACCAATTCGTGGGGATAGTCAAGGAAATAGGCGCTGATGTACAACACGTATCTGTAGGCGACCGTGTTGTCATCAACCCGCTCACAAGTTGTGGCATCTGTGATTTTTGTCTCAAAGGACAACCACATCTTTGTAAAGTTGAAGGCAAAAACACAGCAATTGGGATCAAGCGTAACGGTGGATGGGCCCAGTTCTGTCGCCTCTCTGCAAAAAATGTTATTCCCTTACCTCACCAAGTAACTTTTGAGCAAGCATTATTTTCAGAGCCTATGTCCTGTATCCTGCGTGGTTGGGACTTGCTAGTACCCCTCCAGACAGATGCAGAAGTTCTGATTTGTGGTGCTGGGAACTCGGGGTTGCTTTGGGCATCCTTTCTTCATTTTCGCGGCTACAGAGAAGTTGTCATATCGGAAGTACTTAAAGGGAGACAAAAAATAGCTCATGGTTTAAATTTTGGGTTCCAGCTGGTTACTCCGGATGTTCTTGTCTCAGAGGCCCGTAATGCAAAACAAAACGATGATCAAGAGTGGGGATTTGATGTAGTGGTTGACTGCACTGGAGACCCAAAATGCTTTGAGCAGAGTCTACAGTGGCTTCGACAGGGTGGGCGGTTACTGCTGTTTGGAACATGCCCTCGCAATGCTAATGCTAGCATAAACCCCAACCAGTTATTACAAAAAGAACTAAAAATCATATCCTATCAAGGGAATTCCTTCACCTTCACTTCGGGAATACAAGTATTACAAGATATGGGGAACCATTATCTAGCATTCGAGAGGCTAGGTGTGCGTACTTTTCAGCTGCAGGAGTATATGGCTGCCATAGAAACGATGCGAAGTGGTGAAATCTCCAAGGCAGTCTTTGAATACTAGTAGACAAGCCAATGTTTCTCACTTTTTACATcacaaaattgaaaaaaaaaaacacgttttAAATCATACAGGGTAGTGTAATTATGTCACCTGTTAATTTTTGCTCAATTTTTTGCTCTCATAAACTTGCATTAGCACaaataaacattattttttactATGCCAGAAAATAAACAGCCATTTAGAAAACAGGAAGTGCATATTATGTATttggttttctttttgctGCTTGAGAACAAGTAGTTATATACACTATATTTTTGGCGTACATGCTAGTGTGTATACAGAGAATTTCATGCATTTGTATGCATTTTTGGGGGTGTGCGACATCTATGTAATGTGGAAGAAATGGAGAATCATCACATGTACTGTATGCATATATGTTTTTGACACAAGAATGTTTTTGGACAATAACAGAGACCAGTGTTTGGCCTAATTCTCTCAAAGATTGATCCCTGTTAAGATACATTTTGTATAACAACCACAAAAATAGTTTATTTGTACTAAAATGGTAATTTATGATATTCTGTACAAAATTATATACACAAAGTGCAATTGAAATAACTATTTTGAATCATCCATACTGCCAGCTTGGATCTAAAATATTTTAGAAtttttcaaacgaaaaaatCACCAGCTTCTAAATATAAACTTGAAGAAGCAAATGTTATTGGGAACTTAGGGTTGGTGATGTATTACACACTAATACAATACTATTTTGCTTtaaatttttgtattttctattaaatcttttaaaaaaacatggttATAAAAAGGATGAAATTTAATGTGCAAGCAATAAAACTTTTAGCATGATTTAAACAATgttatgttaaaaaaattgtatgcCACAATAAATATCAGTCTTAGTTGTTCCAAA

Protein

Uniprot

Uniprot term	Description
Q4R0J7	D-arabinitol dehydrogenase 1 OS=Uromyces fabae OX=55588 GN=ARD1 PE=1 SV=1
A6W1W3	L-threonine 3-dehydrogenase OS=Marinomonas sp. (strain MWYL1) OX=400668 GN=tdh PE=3 SV=1
Q2IJN4	L-threonine 3-dehydrogenase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) OX=290397 GN=tdh PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00107	ADH_zinc_N	Zinc-binding dehydrogenase	Domain	Interproscan
PF08240	ADH_N	Alcohol dehydrogenase GroES-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013149	Domain	Alcohol dehydrogenase-like, C-terminal	Interproscan
IPR013154	Domain	Alcohol dehydrogenase-like, N-terminal	Interproscan
IPR011032	Homologous_superfamily	GroES-like superfamily	Interproscan
IPR050129	Family	Zinc-containing alcohol dehydrogenase	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43401	L-THREONINE 3-DEHYDROGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17818	ARD1; D-arabinitol dehydrogenase (NADP+)	EC:1.1.1.287	Pentose and glucuronate interconversions	ko00040	deepkoala