Gene detail

Detailed information of XP_001627918.3 in Nematostella vectensis

Genomic Location: NC_064037.1:15160918...15165237
NR annotation: XP_001627918.3, RNA N6-adenosine-methyltransferase mettl16 isoform X1 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_001627868.3

TACCAGACCCCTATCCACTCAGACGAAATGGCGGCTATTTGAACGTGATTTTGCCACATCAACGTAGTGCATGCGTTTGTGAGACCATTGAGAGTCTATTCAACATTTAAAATGGGCCTGAACGACTTAATGCACCCAAGAAACAGATACAAGGACAGTCCACCAAATTTTAGCGAGCTAGGGGCAATATACCCAGAGTTTAAAAAGTTTACACGCGAGAATTCTAGCGGAACTGTGAGCATAAATTTTAAGGATCCCGAGGCGCTGAGAGCCGTGACATGCTGTACGCTGGATCATGACTTTGGGTTGAAGCTTGATCTACCGTTAGACCGGCTTATACCTACCGTCCCACTCAGGCTTAACTACATACTATGGCTAGAGGATTTGATGAAGAGTTTGGGGGAAGTGGCGGAAGCTGTTTGGGGCTTGGATATAGGCACTGGTGCTTCTTGCATCTACCCTCTTCTTGGTGCTGCCATTGACAACTGGAATTTTATCGCAACTGAAATTGATGAGTTTGCTTTGGGTTATGCCCAAAGGAATGTTGCCCAGAATGGAATGGATGGCAAAATTAAACTCAAACTGGTTAGTCCTGATTCATACCTCAGGAAGCCACTGAAAGACGTCACTCAAAAAATTACCTTCTGCATGTGTAACCCTCCATTCTTTTCCTGTGAGGAGGAGGCCATGTTTGGTGCTTCCAGAACAGACAAGCGCCCTCTACCCACATCTGTTTGCACAGGGTCAGCAAATGAGACTGTTACCAGAGGCGGTGAGGTGGAGTTTGTCAAAGGCATCATTCGGGACAGCATGGAAATGAAAGATATGATCAGCTGGTATACAACAATGTTGGGCAAGAAATCCAGCCTAACGGAAGTCATGGCTTTTCTGAAGAAAAATAAGATTTATGCTGTTACAACAACTGAGTTTTGTCAGGGGAAAACAAGACGTTGGGGAGTTGCATGGACTTTTATTAAAGGCATTTTATCAATAGAGTCTCCACCAGCAAAAAGACATAAGAAGCACCACAAGGCTAAACCTTTGACCTTCACGATCAACTCTTCTTCTTGCCATGTTCAGTCACATGTTAAAGACACAGCAGACAAAATCAAACAATTGTTTTTGCAACTGAAGATTGACATAAAAGAAACGTCCCATAAAACTACAGACTCTATTTCCTTCACATGTACTGCGGTAGAAAACACATGGAGTAACCAACGCAGGAAGCGGAGGGAACAACAGCGCCAGAAGCCACTCATCTCTGATGATGTACCTCCAGCTGCCATAGAAGATGCTGATCAAAGAAGTACCTCAGCCGCTGGCAGTACTCCAACTGCTATAGATTTGTCTCAGACTGGTAAAAAATCAATCACTGACACTTGCGCTTtaacaaaaagagaaaacagTACAGATAAAACTGCAGAGGGACCAATGAATGGCAGTCAAGTATCTGGGAGTACTACAAACTCTGATGGCAAACCAGAAAGTGATATGGCATTGAAGGACAGAGGGGTAAACCAAAATTGCTCGTCACCTCTGTGTGTGTTTTCTGTTAATGTGGGAGAAAAGATAGGAGAAGGACAAGAGATAGTCTGTATTTCTGTTGAGTTTGTAGATGGGAAAGATAAAAATCAGCTTTATCAGATTTATCAGTATTTGCAAAACAAGTTATTGAAGGGATTATGATAAGAATTTACACTTGTGCGAAAACAtcatttttttacagaaaGCTTGCTCTCATTTTGTAATTTAACAGAAAGAGTTGTCACTTTGCTTATCCTAGATACAATGAATGCACAAATATATTACATTTAAAAACAATTACATATCAAgcaagatatatatatataacagtTCAATATGTGTAAGAAAgagtatacacctatttcaaataatgttGCACTCTGAAGTCAATGTATCCTAACTTGCAGTGCTTTATGGGATtcgtataaatggctgaacCATGATATCTGAAAGCCATGGGAATGTTCAGAGGAACATGAACaattattctacagcttttaaAGCcgaaatttgtttttatttaagctttgcttatttttttgatacccatgaaccactgcagTTTACAATACATTAGTTTATGGGTGCAACCTTTATTAAAATACCGTTAGGTGTATATGAGTATATGAGATTTGTTTTCTGTTCTTGTAGACTGAAAATCGCTATCAATTAAACTCATTCTTCATTCA

Protein

Uniprot

Uniprot term	Description
Q6DC64	RNA N(6)-adenosine-methyltransferase mettl16 OS=Danio rerio OX=7955 GN=mettl16 PE=2 SV=1
Q5ZIA0	RNA N(6)-adenosine-methyltransferase METTL16 OS=Gallus gallus OX=9031 GN=METTL16 PE=2 SV=1
Q9CQG2	RNA N(6)-adenosine-methyltransferase METTL16 OS=Mus musculus OX=10090 GN=Mettl16 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05971	Methyltransf_10	RNA methyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR010286	Family	METTL16/RlmF family	Interproscan
IPR017182	Family	Methyltransferase METTL16/PsiM	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13393	SAM-DEPENDENT METHYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0052907	Molecular Function	23S rRNA (adenine(1618)-N(6))-methyltransferase activity	Interproscan
GO:0070475	Biological Process	rRNA base methylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11393	METTL16, METT10D; U6 snRNA m6A methyltransferase	EC:2.1.1.346	Messenger RNA biogenesis	ko03019	deepkoala