Gene detail

Detailed information of XP_001628493.2 in Nematostella vectensis

Genomic Location: NC_064040.1:13959289...13961271
NR annotation: XP_001628493.2, heparan-sulfate 6-O-sulfotransferase 1-B [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_001628443.3

CAACATAAGATCCTCGTCCTAGTCTCCCGCATCGACAAGAGACTTCTAAATCAATGCAACAAGGCATTAGTCGTGTGTTAACAATGATTTATTAGCAAAATACCGCACTTATCTGGCCTTCACACTTACGATGCTCGCTGCAGCATGACTCTTCAAGGCAACTGGAAGaagttttgtttattgttgaCGTTCTGTGCGTTGACATTCTTGATATCTGTGTTGTATTTATGCAGCAACTCATCATGCGACATCGCAACGCTGGCTCCAAATAAACTCAGGTATTTGAGCGAAGGGAATCCACAAAAGATGCACCGAATAAGATTTGGGTTCACTATTAAGGAATCCATCAAGAAATACCAGTTTGACTTTGCTGGAACCGATGTGATGGTTTTTCTCCATATCCAAAAGACTGGCGGAACGACGTTCGGGAAGCATTTGGTCACGAACTTGCAGATTCGAAAGCCATGTGACTGCTCgaagaaaaaagggaaaaaatttcGCTGTACTTGTAATCGTCCAAATTCCAAGAAGATTTGGTTGTTTGCTCGTTATGCTTTGGGTTGGCCGTGTGGGTTACATGCCGATTATACGGAACTTACCGAATGTGTGCCCAAATTTATGAACAAGCGTGATGGTCGCGAGAAACGACGCTTCCTTTACGTTACCATGCTCCGAGAGCCGATGGCTCGCGTTATAAGCGAATTTCTGTGCTATACTAGAGGAACTACTTGGGCAGAATCCAAGCACAAATGCAAGGGCAAAGTCCCTACAAAGGAAGAACTGCCACCATGCTATACTGGGGATAACTGGATGGATGTTACACTAGAGGGATTTAATAAATGCTCTAGTAATCTTGCATTCAATAGACAGGCAAGAATGCTTGCTGATTTGAAACTTGTCAATTGTTATAATAGAACAAACGGCCCCTCGCCTAGAAAGCGAGggaaaataatattaaaaagtgCTATGAAGAATCTAAGGAATATGGCATATTTCGGTCTTGCAGAATACCAGAAAGAAAGCCAGTACTTATTTGAGAAGACATTTGGGATTAAATTCATGAAACCTTTTCAACAAAAGGCTGAGGAGGAAACCCGATCTGCTGATGCTATGAAAAGTATGACTCAGATTGAAAAACGCCGCACTAAATCACTGAATAGCCTAGATATAAGACTTTATGACTATGCAAAAGCGCTATTTTTCTACCGTGTTAGGTATTTCCAAAAGGAGGAAAAAAGGGGTGAGAAACAAATTTTCAATTCATCGTAATTTATTCTCCCTTGTTATGTTTCTTAGTGTGAACTGGGGGTATAAGTTTCAATTTCCAATGTACTTATGAATGGCTACGAGATAGCAAATTCATTCTACAAAACCCACAGCATGAAATGTATGGCTCCCTTTAGCCCCGTGTGGTTAAATTGAAGTTGTAGTGGTTTTTATTGTCGAAAAAACAATTTAATGATTACCATCATATTATTACTGGgtaatttgatatttttcgATATAACcccaaaatacaaaatacaccCCAAAAATAAGCACAAGTTTCTGTGGGAAAATACTTAGTCTGCTATAGCATTCTATATTTTTCCTCAAAGTGTGTATGTGTAATGTTATGGTTTAATCTATAAATCTCGAAACATACAAAATGCATTAAACATTTATCTGTTGTTATGGGCATAGACCAGAAAGTAATATAAACATGATTGTAGCAGCTGTTAGAAATAAGAAAATTGACAAATCGTATCATCTTATGCATACTATCTAACGTatgaaataatttttatatgcaaccatttaaataaaataaaaaaagtaatgTAATTaagattttctttatttataaatGCATTTGACCATTTAAGTTTGACAGTTAAATAAAGGCATACCTATGCATGACTTTGAGAGATGCTTCTCACTGAGTGTAAAGAAAATTGGAAACTTGGCTTGAATGAATctataattatattttatttgcatAAA

Protein

Uniprot

Uniprot term	Description
A0MGZ5	Heparan-sulfate 6-O-sulfotransferase 1-B OS=Danio rerio OX=7955 GN=hs6st1b PE=2 SV=3
O60243	Heparan-sulfate 6-O-sulfotransferase 1 OS=Homo sapiens OX=9606 GN=HS6ST1 PE=1 SV=5
Q91ZB4	Heparan-sulfate 6-O-sulfotransferase 1 OS=Cricetulus griseus OX=10029 GN=HS6ST1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03567	Sulfotransfer_2	Sulfotransferase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010635	Family	Heparan sulphate 6-sulfotransferase/Protein-tyrosine sulfotransferase	Interproscan
IPR005331	Family	Sulfotransferase	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12812	HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008146	Molecular Function	sulfotransferase activity	Interproscan
GO:0015015	Biological Process	heparan sulfate proteoglycan biosynthetic process, enzymatic modification	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0017095	Molecular Function	heparan sulfate 6-O-sulfotransferase activity	Interproscan