Gene detail

Detailed information of XP_001628624.1 in Nematostella vectensis

Genomic Location: NC_064040.1:2866437...2875509
NR annotation: XP_001628624.1, protein-glucosylgalactosylhydroxylysine glucosidase [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

LOC5507997

ATGGCGTTAAGACTCGCCGGAGTTTCCTTGCGTTTGTTATGGGTACTAGTAATAGCAGTCACCGGGCTTAAGCCTAGAAAACCCTCAGATACCTGCTTCGTCACAAAAGAACTCCCTTTCCATGTAAGCACTTCGTCTATCACCGAAAGCAAAGCGGGTAACTTTATGGCCTCCATAGCGAACGGGTATGTAGGCACAGTGGTGATGAGTAACTCAGTGCATGTGTCAGGTCTGTTTAACGGCAAAGGATGGCCCAAGAGGTACCCGATCTATCCGATTTACATGTCTGAACACGCGCACCGTGCGCGCCTACCATCCACCGCCTCGATCTCTTTCAAGGTGCACGATAACGATGTCGTTTATATCAATGGGACGCGCTCGTACGCGCTGGACGTCAAAACTGGAGTGTTTTACAGCTGGTTCGAAGAGACTAATGAGAATGGGTCGCTGTTCATCGAGATGCGCTACTATGCGCACAGAGAGAGGCGGAATCTGCTGATAAACGAGATCACTATTAAGAATGACTTGAACAAGGAAATCACCCTGGACTTGAGTAACAACTATGGGAATTTCTCAAAGGACGTCAAGCTAACTCAGCACACGGTCAGCGAAAAAGAGGAGCTGGAAATTGCATTTGGAAAGGTTAACATTCCCGAGGAAAAATTCGGTCTCCAGCCGCAAGTTGCGCTTGCATTTCGCGACATCAAGGAACACATCTTTATTAACGCGTCCGAGTGGCGCACGTGGTATTACATCACAGCCATAGCAACCAGCATAGATACCAAGTTCGACCCATGGAGACAAGCCGAGGGGGCCTGGAAGGAGGCTATGAGGGATAAACGGCACTTGCTTTGGCATCACACCAAAGCCTGGGAGGAGCTGTGGGAATCCGGCAAAGTCGATGTCGTGACAAAGGACAAAAGTTCTCACCTTGGACAAGCCATCTACGGCAGCTTATACTACCTACTGTCGTCCACCCGGGCCGACTGGCCGTACGGGCTGAGTCCGGGGGGGTTACCGGGAGGAGAGGAGTACATGGGTCACACCTTTTGGGACCAGGACATCTGGATGTACCCAGTCATGGTGCTCCTGTACCCTGATCTTGCGCGCGCGTCGTTGAGGTATCGGTATGATCGCCTGCCTGCCGCGAGGAGGATCGCGAGAAAATGGGGTTACAAAGGTGCAATGTTCCCGTGGGAGAGTTCCCTCAGCGGAATCGAGACTTCACCCGGCGAAAAGTACGGCCGCTATCAAAACCATATCACAGGAGATATCGCTTACGCTGCCCAGCTATACTGGCACGCAACCAAGGACTACCAGTGGCTAAAAGAGATTGGGTACGCTTTGGCCTACCAGACCGCGGAGTACTGGGCCAGTCGCGTAAGCTTTGATAACAGGAAAGAGAAGTACGTCATCGAGTACGTCATGCCCCCTGACGAATACCAGTTTCCAGTGGACAACTCGGTTTATACCAACGTCGTGGCCAAGATTAACCTGGAGTTTGCTGTGAAGGTGTGCACATTGCTCGGGCGATACTACCCTAAGATGTGGGTGAAGATAGCGGAACAGATGTACATTCCGTTCGATAGCGATCGTAATTTTCATCCAGAGTTCGACCTCTACGACTTGGGCTATCAGGCCAAGCAGGCGGACACCATTCTTATAGGCTACCCTCTCATGTACAACATGAGCCGTCAGGTTCGGTACAATGATCTATTGACATATGAGAACCGCACCGATCCCGAGGGACCCGCCATGACCCACGCCATGTTTGCTATCGGTTGGCTGGAGGTTGGGGAGGAGGAGAGAGCAGCGAAGGCATTCCTCAAGAACTACGAACACATAGAGCAGCCGTTCCAGGTCTGGACTGAACAACGTCGCAAAAGAGGAGCCATCAACTTCATCACCGGGGCGGGAGGCTTTCTCCAAGCTGTACTCTTCGGCTATGGCGGCTTTCGTATCAGAGAAGACCAGCTGTACTTCGACCCAAAACTTCCCCCGACTTCCAATACCTTCACCATCACAGGCGTCGACTATTTGGGCAGCTCATTGAAGTTTATCATCAAGAATAAGAAGATGCGAATAACTCTGACGGAGAGAGAGCAGATTGCACCTGCGCTGGAGCTTGTCATTTACAAGAAGGTGTACCCGCTAGAGCACAAGAACACGCTTCTACTTCTCAGGGGACCCGGGTTTATACGCATGCGCAGAGATTGA

Transcript

rna-XM_001628574.3

CTCACGAAACATCACGTTATCACATGAACAATGGTACTCAATCTGACCTCGAGGATTAACAACAACTGAGCATACGCATTCCTTGAGCTAGGGCCAAGGAACAGCACCTCAAAACCATTCCCTTTAAACATATGAAAAGCCTGCTGTAGTCTTTAAGACCGCAACTGAACCGCGTCTTAACGCGACTGAACCGTGCGTGAAAGGATGGCGTTAAGACTCGCCGGAGTTTCCTTGCGTTTGTTATGGGTACTAGTAATAGCAGTCACCGGGCTTAAGCCTAGAAAACCCTCAGATACCTGCTTCGTCACAAAAGAACTCCCTTTCCATGTAAGCACTTCGTCTATCACCGAAAGCAAAGCGGGTAACTTTATGGCCTCCATAGCGAACGGGTATGTAGGCACAGTGGTGATGAGTAACTCAGTGCATGTGTCAGGTCTGTTTAACGGCAAAGGATGGCCCAAGAGGTACCCGATCTATCCGATTTACATGTCTGAACACGCGCACCGTGCGCGCCTACCATCCACCGCCTCGATCTCTTTCAAGGTGCACGATAACGATGTCGTTTATATCAATGGGACGCGCTCGTACGCGCTGGACGTCAAAACTGGAGTGTTTTACAGCTGGTTCGAAGAGACTAATGAGAATGGGTCGCTGTTCATCGAGATGCGCTACTATGCGCACAGAGAGAGGCGGAATCTGCTGATAAACGAGATCACTATTAAGAATGACTTGAACAAGGAAATCACCCTGGACTTGAGTAACAACTATGGGAATTTCTCAAAGGACGTCAAGCTAACTCAGCACACGGTCAGCGAAAAAGAGGAGCTGGAAATTGCATTTGGAAAGGTTAACATTCCCGAGGAAAAATTCGGTCTCCAGCCGCAAGTTGCGCTTGCATTTCGCGACATCAAGGAACACATCTTTATTAACGCGTCCGAGTGGCGCACGTGGTATTACATCACAGCCATAGCAACCAGCATAGATACCAAGTTCGACCCATGGAGACAAGCCGAGGGGGCCTGGAAGGAGGCTATGAGGGATAAACGGCACTTGCTTTGGCATCACACCAAAGCCTGGGAGGAGCTGTGGGAATCCGGCAAAGTCGATGTCGTGACAAAGGACAAAAGTTCTCACCTTGGACAAGCCATCTACGGCAGCTTATACTACCTACTGTCGTCCACCCGGGCCGACTGGCCGTACGGGCTGAGTCCGGGGGGGTTACCGGGAGGAGAGGAGTACATGGGTCACACCTTTTGGGACCAGGACATCTGGATGTACCCAGTCATGGTGCTCCTGTACCCTGATCTTGCGCGCGCGTCGTTGAGGTATCGGTATGATCGCCTGCCTGCCGCGAGGAGGATCGCGAGAAAATGGGGTTACAAAGGTGCAATGTTCCCGTGGGAGAGTTCCCTCAGCGGAATCGAGACTTCACCCGGCGAAAAGTACGGCCGCTATCAAAACCATATCACAGGAGATATCGCTTACGCTGCCCAGCTATACTGGCACGCAACCAAGGACTACCAGTGGCTAAAAGAGATTGGGTACGCTTTGGCCTACCAGACCGCGGAGTACTGGGCCAGTCGCGTAAGCTTTGATAACAGGAAAGAGAAGTACGTCATCGAGTACGTCATGCCCCCTGACGAATACCAGTTTCCAGTGGACAACTCGGTTTATACCAACGTCGTGGCCAAGATTAACCTGGAGTTTGCTGTGAAGGTGTGCACATTGCTCGGGCGATACTACCCTAAGATGTGGGTGAAGATAGCGGAACAGATGTACATTCCGTTCGATAGCGATCGTAATTTTCATCCAGAGTTCGACCTCTACGACTTGGGCTATCAGGCCAAGCAGGCGGACACCATTCTTATAGGCTACCCTCTCATGTACAACATGAGCCGTCAGGTTCGGTACAATGATCTATTGACATATGAGAACCGCACCGATCCCGAGGGACCCGCCATGACCCACGCCATGTTTGCTATCGGTTGGCTGGAGGTTGGGGAGGAGGAGAGAGCAGCGAAGGCATTCCTCAAGAACTACGAACACATAGAGCAGCCGTTCCAGGTCTGGACTGAACAACGTCGCAAAAGAGGAGCCATCAACTTCATCACCGGGGCGGGAGGCTTTCTCCAAGCTGTACTCTTCGGCTATGGCGGCTTTCGTATCAGAGAAGACCAGCTGTACTTCGACCCAAAACTTCCCCCGACTTCCAATACCTTCACCATCACAGGCGTCGACTATTTGGGCAGCTCATTGAAGTTTATCATCAAGAATAAGAAGATGCGAATAACTCTGACGGAGAGAGAGCAGATTGCACCTGCGCTGGAGCTTGTCATTTACAAGAAGGTGTACCCGCTAGAGCACAAGAACACGCTTCTACTTCTCAGGGGACCCGGGTTTATACGCATGCGCAGAGATTGATACAAGGAACTGAACTATCTGCCCACAATGCATTGCGTTAATATTTTAAGGGAAATTCGCGCTTTTGGGGAAGTTTATCTTAATATCTTAACTACACAGAACAGGCCATGAGCTTAACTTTAGAAAAAGTAGAGTTCGATTTAAATCCATTTAAGAAAAATTGGAAATTCTACTTTCCAAATAAATGTCAGTCGAATGAGTATAGGAATAACATATTTAacatacttgcatggattgcTTTGAAAGTTGTCCTCAATCTAATAAGTCAACGTTCCCGTCCTGGTCCTATTGcacaaaaaatacattttattatttgcgaAAGCGATATAAAAATTCGTGCACATTTTCTGGTATTTCatgacaaaataaacaaaacaatgcATTTTGGGCAGCGTAAAAATTgacatgatgataatgataaatgtTATATGTATTTAGCTTTATTTGTTATAATGTCTGATTTCAGGAAAGCTccatacccctcccctcctcctgCCCTTTGGAGTACCTTTAAATGCAGTGTTTGTGTGTAACAccttaccaccaccacctggGATCGTCACCGAAAGACGATCCTCACCCCACTCGTAAACCACGGAATTCCACCACCTTTTGGTGGATTGGAGAGGGGGGATGTGAATATTTTCTGATCATACGATAATACACGAACATTCATGCGTTTTGATGGTTTGGGGCTTCTCAGTAGATGTCACTAATAAACCATACATTTCGTA

Protein

Uniprot

Uniprot term	Description
F1NZI4	Protein-glucosylgalactosylhydroxylysine glucosidase OS=Gallus gallus OX=9031 GN=PGGHG PE=1 SV=3
A0JMP0	Protein-glucosylgalactosylhydroxylysine glucosidase OS=Danio rerio OX=7955 GN=pgghg PE=2 SV=1
Q8BP56	Protein-glucosylgalactosylhydroxylysine glucosidase OS=Mus musculus OX=10090 GN=Pgghg PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03632	Glyco_hydro_65m	Glycosyl hydrolase family 65 central catalytic domain	Repeat	Interproscan
PF03633	Glyco_hydro_65C	Glycosyl hydrolase family 65, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012341	Homologous_superfamily	Six-hairpin glycosidase-like superfamily	Interproscan
IPR005195	Domain	Glycoside hydrolase, family 65, central catalytic	Interproscan
IPR005194	Domain	Glycoside hydrolase family 65, C-terminal	Interproscan
IPR008928	Homologous_superfamily	Six-hairpin glycosidase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11051	GLYCOSYL HYDROLASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004553	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22078	PGGHG, ATHL1; protein-glucosylgalactosylhydroxylysine glucosidase	EC:3.2.1.107	Enzymes with EC numbers	-	deepkoala