Gene detail

Detailed information of XP_001629113.3 in Nematostella vectensis

Genomic Location: NC_064046.1:75830...81218
NR annotation: XP_001629113.3, uncharacterized protein LOC5508565 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_001629063.3

TACTTGTTGGCGACACGGGAGTCGGGAAGACTTCTATTTTCTTGAGATATGAAAGAAACTACTTCTCCAGGCACAGGACGTCTTCATTTGGTGTTGATAAATGCACCAAAGAAATTTCTGTAGACGACCAACTTTGCAAGTTAAACATCTGGGATACAGCTGGGCTTGAGTGCACAGGCTCATTAACTTCTCATTACTACCACTTGGCTCAGagcattatttttgtctatTCCGTGGAAAGTCTAGCTTCATTAACTGCACTCCATCACTGGATACAAGATGCAGAACAATACGCACCAAACGCGAAAAAATTTCTTGCAGGAAATAAGAACGATTTGGATAAAGATGACTGGGAAGTGGACGAAGGCATACTACAGAGATTTATGGACAATAAAGAGTttgcattgaaatttgatATTTCTGCACTGTCTGGTGATGGTGTATGTGAGATGTTTAAAAGTATATCAAGACACTTACTACAGAGGAATGTAAAACCAAGTTTGCCAGCAACTGATGGGTTCTCTGTACCTGATTTATCCCAAGAAGATTCTCTGGACCTTAGGAAAAGCATGACTAGCGAGTCAGGCTCTGGTTGTTCATGCTAATTAATGTTACTAATTTTACTTTTAGAAATAATACTGATAGAATcgacttttttatttctgtttaCCAAATGTTATTATGAATAAAAGTTACAATTATCTCCAAtttagaatttttattttattcataaaAATACATAGTATCTAAGGATCCATAAAGAGGCAACGCACTCCTCCCCCTTTCTCTGTGAAACAAGGACTCGGATGTGCCTGAAATTAGgagaagaaaaacaacagGATTTTGGGATTTGGGTTACTGGGGACAGAATTTTAGGCATCTAGGAAAATGGTACCTGCAGCTTGGTAAACAGGATTTACACGAGTTAGTTTGCTATAAGAAGGGCGTAAAAAAGCGGAAGAAGAAATCGTAGAAActagttgtttttgtttattgttattttctaGGCATTCTATGCTTTGTTTCGAAACTGAGACATTAACCGGAAATAATTTTCACTTCCGTTCACAACAAAAGTGTCACGTGACAGGACACACCAGTTTGAGAAGTTGTGTGAGTTATTAAAACGTTGGCTGTTCGTTCTCTGAACTGAAAGTTATTTTCACCCTTTTTACCAAACTTTCAATGGCAGAGAAAGCACCCTCGACTGGGGGAGCCACAGACTCTGATTTCGAGCAGTTGCAAGGCGCTGTCACTGTGATTTCGTGCGCAGAGGAACCACCGAGCCATGTGGAAAACTCTCAGACAAGCAGAAGAGCACGTTCTTTGTGGGAAAAGgtgaaaaggaaatttacTTCAAGACGCACTGATTCAAATGAGAATGAACACAGAGAGTTTGAAGGCGTCGATAGAACACAATACGTGTACGAAGACGACAAAGATTATCATCATTACGAAACAGACTCGGAAAGCGAAGAGATTGACGAGCCAGTGTTTGTCAGTAATGCAGAACTGTTTTCTCAAAACGGGAGAGATCATGTACCTCGGAGAAAATATCGCGATCGACTCTACATGAAGCCTGATATTATGCAACTACATCGGTCTAGGCGAGCCCAAACGTTTAGCTTTTTCACAAGGGAAGAGCGATCAGATAATCacgctaaacacagaaatgccAGTAATTGCAAAGATAACTCATGTTTACAATGCGAAGAAAGTAGATCTCGAATTACTCAGAGAAATCGATTTTGGATTTTCAAGAGGTCTGCAGTCAAATCGAAAAAGAACGATACAAATAAAATTGGAGCAATTGGGAATAATATGTGTGATGTGCTGAATGGAAATATAAGGGCGAATCATGGTAGTGAATTGGTGGCAGGTAATGTACTTCCTGGTTTGAGGGACCCCCCTCCACTCCCCTTGCGGCCATTAGTGCAGAGGAGGCATATGAGGCGATGCTACTCTGATAGTCAACCTGATTTATCTGCCGTCAGTCAGGGGTACAGAGATGGTGTTGCAAAAAGGTATGGCAATACACATTCGATAGCATGCAGTGAACATCGGTTGTTGAGAGCCAACAGTGCCAACAATTTAGATGTAACTAACACGTTTCCAAGTCCAGTATCCTCATCCGAGCCAGGCTTTCCAACTGCAGCCACAAATATCATTAGTGATCAATTCGATAGTCAGTCAGTGAACACTAATGCAGACAACAACACTGTGCGTCGATTGTCGTCAAGTCTAAAAACCTTGTCTAACTGTGGCTGGTACTGGGGTCCCATGTCAAGTAAAGAAGCAGAAAAGGAACTTTACAATCAGCCAGATGGCTGCTTCCTGGTACGAGATAGTGAAAATGACTATCACCTCTTAAGTGTTAGCTTCCGATCAAAGGGTGCAACATGCCATACAAGACTAATTTACAACAAAGGGAAGTTTAGTTTTTTTCAAGACGAGATGGGAAAGGACTCTGCATATGAGCTTATCATGCATGCCATGGAAGCGTCCCAGGACGGCATCCTCTGTAATTCCAGGGGCCATAATAGGAACACTATCTGCTATCCTGTTCGCCTACAGGTTCCTATTTCAAGGTTTAACACAGTTCCACCACTTCAGTTTCTCTGTCGATTTGTGATCAGACAGAATATCAGATGTGACCAACTAGATCAACTGCCCCTACCAAAACAAATTATAAGAAATCTAAGTGGAAATCATTTTCGCTTAGACAGTGAACAGTGCATTACAGATAGGAGACATTGATTGATGAATAATCACAAAAATGgagatttttttcaaatcttaTGCTCTAAGTCAATCTTTATTTGGTTTGTTACATTTGAATGTAAGTATGACTCCCCCTCTGGGTTTAactctccctctctctctgGTTATGactctccctccccctccctctctagGTTTAACTCTTCCTCCCTCTCTGGGTATGACTatctctccccctccctctctggGTTtaactcccctccccctctgggTATGACTATCCCTCCCCCTCTGGGTTTATCCCTCCCTCTCTGGGTATGACTATCTCTCCCCCTCTGGGTATGACTatctctccccctccctctctggGTTTAACTTCCCTCCCTCTCTGGGTATGACTATCCCTCCCCCTCTGGGTTtaactcccctccccctctgggTATGACTATCCCTCCCCCTCTGGGTTTAACTCTCCCTCCCTCTCTGGGTATGACTATCTCTCCCCCTGCCTCTCTGGGTTtaactcccctccccctctgggTATGACTATCCCTCCCCCTCTGGGTTTATCCCTCCCTCTCTGGGTATGACTatctctccccctccctctctggGTTtaactcccctccccctctgggTATGACTatctctccccctccctctctggGTTTAACTTCCCTCCCTCTCTGGGTATGActatccctccccctccctctctggGTTtaactcccctccccctctgggTATGACTatctctccccctccctctctggGTTTAACTTCCCTCCCTCTCTGGGTATGACTATCCCTCCCCCGCTGGGTTTAACTCCCCTCGCCCTCTGGGTATGACTatctctcccccctccctctctgggtttaactccccccccccctctgggTATGACTATCCCTCCCCCTCTGAGTTAACTCTCCCTCCCTCTCTGGGTATGACTatctctccccctccctctctgggtttaactccccccccccctctgggTATGACTATCCCTCCCCCTCTGAGTTAACTCTCCCTCCCTCTCTGGGTATGACTatctctccccctccctctctgggtttaacccccctccccctctgggTATGACTATCCCTCCCCCTCTGGGTTTAACTCTCCCTCCCTCTCTGGGTATGACTatctctccccctccctctctggGTTtaactcccctccccctctgggTATGACTATCTCTCCCCCTCTGTGGGTTTaactccccctccctctctggGTATGACTATCCCTCCCTCTCTGGGTTTAactcccctccctctctggGTATGAGTATCTCTCCCTCTCTGGGTTtaactcccctccccctctgggTATGACTAtctctcccctccctctctggGTTTAactcccctccctctctggGTATGACTATCCCTCCCCCTCTGGGTTttactccccctccccctctgggTATGACTatctctccccctccctctgGGTTTaactccccctccctctctggGTATGACtatctctccccctccccctctaagtATGACTTCCCAGGGACGACTCCCCCCATCAGGGtactactccctcccccccccccccccaccccccccactGGGAACAAGTCCCTCATGACATAGATGTCGATGTTTTTTATTGGTACCATATAACTTTTGTTACATAGGTTATTTCAACCAATAAATTTCTATATTACGTA

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|SOCS

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00017	SH2	SH2 domain	Domain	Interproscan
PF07525	SOCS_box	SOCS box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036860	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR036036	Homologous_superfamily	SOCS box-like domain superfamily	Interproscan
IPR001496	Domain	SOCS box domain	Interproscan
IPR000980	Domain	SH2 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10155	PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005942	Cellular Component	phosphatidylinositol 3-kinase complex	Interproscan
GO:0046854	Biological Process	phosphatidylinositol phosphate biosynthetic process	Interproscan
GO:0046935	Molecular Function	1-phosphatidylinositol-3-kinase regulator activity	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04699	SOCS6_7; suppressor of cytokine signaling 6/7	-	Ubiquitin system	ko04121	deepkoala