Gene detail

Detailed information of XP_001629141.3 in Nematostella vectensis

Genomic Location: NC_064046.1:73015...75665
NR annotation: XP_001629141.3, ras-related protein Rab-30 isoform X1 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_001629091.3

TTCTCAACAGTAAGGAAAATTTTTACATAATTAAGGTTGTAATACACAGGCAACCACTaaaaatcatatttttatgttttatcgGTTATTTTGGTCTGTAAATTTTTGCATTGCTCAAGGTAGTTGTGGGATCCCTGTTTTGTCTGCTGAGCCAGGAGCTAAGATGGCGGACTTGTATGCCGAAAGAGGTCCTTTGTTCAAGGTTGTGTTGCTTGGAGAAGCAGGGGTCGGAAAAACGTCACTTTTCTACAGATTAAAGGAAAATCACTTTACTCCTGGCAGAAGAAACACGATCGGAATTGATAGCTGCTCGAAATTCGTAAAAATCGGAGAGAAGCAAGTGACGcTGAGTGTGTGGGATACAGCTGGCGTTGAACGATTCCGCACTGTCACAAAGAACTATTACCGTGGAGCACATGCATGTATTCTCATGTTCAATGTTGATGATCCTGGCTCCTTACAGTATCTCCTTCACTGGATACATGACACGGATGAATTCTGTCCGGATGCATTGAAAGTTCTAGTGGCCAACAAAATAGACTTGGATGAGCAGGTTACAACAGAAAGTGTTGAACTGTTTGCTAGCTCTCATGAGTGCCATCTAACCTTCAGGATATCAGCAAAGACAGGAGAAGGGATTGGCAAAGCTTGTACTGAAATTGCTAAAGCATTATtgagagaaaacaaggaattAGAGGATGATTCTCACAATGAGTCATCTAAAAGTGATACAATTGGACTTGGAACAACACCCGACCCTGCCATCCGGCAATGGAGGAGTGGCTGTTGTGCATCACGTTAGGAACCATATTGTCAAATCTCTAAACTATTATCAAATATGGATTATAAGCACAAACAAGAGGCAGTTTTCCATACGGTTTGAGTGAGAAAGCAAGGCCTTTCCAGTTCAGAGTTTGTTAACAGCCTTGCAAATATTTGCAGGTTTTAGTTCTTACTAAGCTACAGCATTTGAAGCCCTTCAATCAGGTGCTCAGCTTCCATCCTCAAAAACCCAAGGTGAGATCACAGGCACGAGAAAGAGGTGGAACAAGGCCAGCCTAGGGATAGGGGTTAGGGGGCGagagagaagagaaagaaGCAAGAAGACAAAGCCTGTGCCGCTTGTCAAATTCACTAATTGGATTTAACACCCTTAAAACTGGCTTTTATAGAACAGGCTCCCAGGGCATTTTCTCCCTCCTTTCTTTTCTCTCctgcccccttccccctctgcCGCTCGTGCACCTTGTTATGCTGACCACTGGGTAGCTGAGGATGCTAAGCTTCAGGCTTTATTgttaaatgaataaaatgtTTACTTAATTCGCTGCAAGAAAAAATCTGACCTCCCAAAACCTTGCTTTTTCACTTGAATTACATTATCTTGAAAATATCTAGATgatggataaatcattttaaaattattataaaatatgGAATATAGATACATTTTGAATTTGtgtgaataagaaaaaaaggtgATTTGATCTAATCTAAtctgatagaaaaaaaatagcttgattagagtggttttcgtAGACCTGTGGAAAGCAATTTAGCTTATCTTGGTTAATGCACTCTGATTTTCTGTTCCCTTTTGTGTTAGCTTTTTTGGTTTGAGAAAATCACTCAATATGTGGGagatataatataatatatataatataatagcGTTTTTGGTTTGAGAAAATCACTCAATATGTAGGAGATATAATTTCGATATCTGgtgcaaataaaaattgtccaAATGGGAGCATCTGATTACTATaggcaaaaaaagaaatgtattAAAATGTCTCTGATTCTAAATGTACTGTAAGTTGCTGCTTCTCTTCCCtaaagttttgaatattcagTGAACTATAGCTTACAATTCCCAATAGATAAATTGCCTTCAGTCATTTTAAATCCTATAAGTTTTCCGTGGACAGTACTAGTTTGGGTATAAATGATGAAAACCAggtatgcctagtgcacactagtgacataacgacataaaaaCATTCTTTTAAACCCAA

Protein

Uniprot

Uniprot term	Description
Q9TVU5	Ras-related protein Rab-1 OS=Theileria parva OX=5875 GN=rab1 PE=1 SV=1
Q8MXS1	Ras-related protein Rab-18 OS=Caenorhabditis elegans OX=6239 GN=rab-18 PE=3 SV=1
P24408	Ras-related protein Rab-9A OS=Canis lupus familiaris OX=9615 GN=RAB9A PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005225	Domain	Small GTP-binding protein domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001806	Family	Small GTPase	Interproscan
IPR050227	Family	Ras-related protein Rab	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47977	RAS-RELATED PROTEIN RAB	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005802	Cellular Component	trans-Golgi network	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan
GO:0031985	Cellular Component	Golgi cisterna	Interproscan