Gene detail

Detailed information of XP_001629822.2 in Nematostella vectensis

Genomic Location: NC_064037.1:6109606...6112753
NR annotation: XP_001629822.2, uncharacterized protein LOC5509304 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_001629772.3

ATGAGCCGAAGCGTAAGAGATCTACGCGAGCTTATTTGTATATCAAGGTTGTCATATCATGGAGAGGAAGAACAAGATCCTGAGCCGGAAAATTTGAACGCTGCGAGTGAAGACTTTAACGGCAACCGGGTTCCCAAGGATACCAAAACCAAACGAAAATCACCCAAGAAAAAGGTCAAAGATAAAGCTATATCTGGGTTAGAAAGTCATAAAAGCCCACCTCTGAGTCCTGGGGGCTCAAGCAAGGCGGTACTATTACCCCCTATTCGCAATTCTTCAGCTGGAAGCAGTGGTTCGAGCTCGGGACGGAACTCTCCCGCAAGTTCTCTGACAAACGAAGAGCTGCAGCCATGTCGACCTTTCTCAAGTATTGCGAAGAAGTACCAGCCAAGAAAGACGAACTTTGATGATGTTCTTGTTTACATGGACGCGACGGTGATCACAGAATGGCTATCGCGGGCGAATAAATCCGTTCAAAGTCTGACGTCCTGGCTACATTCCGGTTGTAATTTTGTACACTTTGCTCATTTTTGGTTGTCTGATTTAGTCGATAGCAAACGACGGGATGCCATAGATATGGAGTTCAGTATTGTTATGGACGAAGTGCAATTTGCATTTGGAGTTGGACTACAAGGAAAGGAGATCTCGATGGAAGACATTAGATCTTTAACTACAGCCATATTTTGGGAGTATCCAGGGAAATTATCAGACACAGAGAATCAGCATTACTTCTTAACCATGCTTATATGTCTGTGTTCTGGGAGACAAGATAATTATAAATCACTCCTTTCAAATGTGCGGTGCTCaacaaacaataagcaatttgCTCAGCTTGTCCTAGCTACAAGGTCGTTTACTATCGTTAGTATATGTTCAGGGGTGATAGAATTCTTCAAGCAAGTTTCCCCTGTGAACCTTACACATTGTGATATTACCTCTGCCCCGCATGCTCAAGATCTTATCAGTGTTGCAAAACTCTTTGCTTTCCAAGCAGTAGAAAAAGGATTTCTGGATGTCTTTAAGTTTTTAGTGGAAGAATATCAGTTGGACCCAGTGTTGACTACTGACTCATCTGACAAGACATTTCTATTCACTTCTGTCATTAGTGGTCAAGAACAAGTATTGAATTACCTTCTCTCGCTTGAGCCAAGACCCAATGTGAATAAGGTGGTATCAGCGTCAGGAAACACGCCTCTCCATGCTGCAGTGAACTGTGGTAACCAGAGTATGGTAAAGCTCCTGGCAAATGCTGGTGCTGACTTGAATGCTGCTAATGAGGACTGTGACGGGGCCACTCCTCTCTTCTTAGCAATTATGAGTGGTAACTTGGCCATGGTCTCTTTGTTGTTATCTCTGGGCTGTAGGACCAATGTGTACATGGGAGCTTTAGCTGTCAGCCCACTAGACTTAGCCAAGGAATTAGAGCTTCATGACATTGCTGAAATGTTGGACAGTTCTCACATTACAGAGTAAACTTAGCGGAGGAATTAGAGCTTGAAAATATAGCTGAAATGCTGGACAACCCTCACTTTACAAACCAGTtttgctgaggtttgtctttTGAGGATAGAAAAACAGCTTAGAAATACTCCTTTTTTGGTGCTCTGGTGGGACTTCAATTTTTTGTTACCATTGTTTTACCAGGTGTAATGCTTGTTGAACAGCCTACTCCCTGAAGAGTGGTCGAGAAAATAGGAGAGAATCTTGGGACCAAATTAGAATGTGCAGAGTTTGGTTCAAGATGTAAAGATATTTGTAGGGGAACAATTCACCAATGATTTTAGCAgtgtttttgaaaatttgagagtttgcaaaataacaaaatccAAAGTATTAAAAGACCTCTGTTTTGCCAAAAAATACAGCATTGTGGTTTGCATTTATATCAGGTAAATGGTCATACATGGAGAATAGTATTCTTATATATCAATACAGGCACTATACCTACTGAAAACATAAAGATTATCGTACAGGGTAAGCCAGTTAGATCCTTTCTATAAAACTTTAATACCACAGGAAATCAATTCACCTTTCTGTTTATTAGACTTGGTTGAAAAAATCTTAGGGGTTTTGTTACAATATGTGCCATTTTCCCACCTACTCTTTTTATAAGCATGCTGGTTTACCCAATGGCATTGAACATGCTGGTTTTAACCAATGGGATGAAAGGGGTATCCACCTTGGGCCTGGTTTCCTTTTGTGCTATATGTCGCATCTAGAGTAGTTTTCAAAAACacatgaaatactatttagtttatttagtactaatacactgtaatgtctttgttctcttttcttcTGGCTTGGCTATTACActtttgttgcacgggattttgaaaaccactcgaTCAGCAGTAGTTTTTCCCTATAGAGGGGCCAATTTAACCCAACGATATCCCGTTGCTATGGCTACCATTTTCAATCACAAGAAATTTAAAGCATCCATTACCATTTATACACTGTTCCTGTATTTATTGTTCTTTATTTACAGTCTAATAGTAAATAGTCTTGGAAGATATATAGTCTCTAAATATGGATTATTAGATAGTTTTACTGATGAAAGCAAAGTGTTTTGGGAGAGGTCTGTTGGCCTCTTGGGTGCTGTTATCAAATAAAACGTTTTAGAGTGTTCTTATCTATATTCATTAAAAACACATTCGTACTCTG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF15487	FAM220	FAM220 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR029155	Domain	SIPAR domain	Interproscan
IPR028320	Family	RelA-associated inhibitor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24164	RELA-ASSOCIATED INHIBITOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan