Gene detail

Detailed information of XP_001630968.2 in Nematostella vectensis

Genomic Location: NC_064041.1:14650224...14658827
NR annotation: XP_001630968.2, DNA polymerase iota [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5510511

ATGTATGGATACCAAGAAAACCATCTTCCCCCAAACAGTGATGGCGAGTGCGAAGTTGATGATTCCGAAGAGGAATGGCAAAAATGGCGAGTAAGACCCGTGTCTTTGACAGGCGCGCAATTACCGCCGCTCAAGAGACAAAAACTAGACTCCTTCCTTTCAACTTCGCTCAACGAAACTTCAAACGACCCTAGCACTGACAAACTCGGCACGAGCAAGCATAACAGAGTGATTGTGCACATAGACATTGACTGCTTCTATGCACAGGTTGAAATGATAAGAAACCCGTGTCTCAGAGATCGGCCTGTGGGTGTCTCGCAAAAACACATTCTCGTTACTTGTAATTACGTGGCACGGGCCATGGGACTTAAAAAGCTTATATCCTTAGCAGAAGCTAAAAAGAAATGCCCCGATCTAGTCATTATAAACGGAGAGGACTTGACGAAGTATAGAGAATTCTCAAGTAGGGTGACAAAGTTGTTGAGACGGTTTGCACTGCGGGTGGAAAGACTTGGTCTAGACGAGAATTATGTTGATGTCAGTGAATTGGTGCAAGAGAGAATGAAGCATGCGCCCCGTGGATCTTATATAGCTGTTGGTTGTATCTATGGTGACAACATTTTGAAAGGAAGCTCTAATGAGGTTTGTCCCTGTGGGTGCCATGAGAGACTGACTGTTGGATCAGTGATTGCTTCTGAGCTGCGGAAAGCAATTTTCGATGAGATAGGTTTGACTACCTGCGCAGGCATTGCTCACAACAAATTGCTGGCAAAGATAGCGGGGGAGCAGAACAAGCCAAATAAACAGACCCTACTGTACACAGAGAGAGTGGAAGGACTGATGGGACTCCTGCCAGTCAGGAAAGTACCAGGTATTGGACGCAGTACGTGTGCCCGGCTAGGCAGCCTTGGGATCACAACTATTGCAGAGCTTCAAGAATGCTCCAAGAAGGCCCTCCTGAATGAATTTAACTCCCAGGAAGTTAGAATCCTACATGCACTAAGCCACGGGGCGGATGACTCCCAGGTCAGCACAGATTCCATGCCGAAATCTATCAGCGAGGAAGACTCCTACAGCAACTTGTGCTCACTAGAGTCTGTGAAAACAAACCTAAGGGTTCTTATTGGTAATCTTATCCCAAGAATTACGGAAGATACAGGACATCCTCAGACGGTGCGACTGGCAATAAGGCGAGGTGGGCAAGCGCCCGGAGTCTACAAGAAGGAAAGCAGACAGTGTCCTGTCCCGGATAGGTTTGCAATGAATACGCCGAACTCTTCTGAAAAGATAAATGTGCTCTTTGGAACTGTATTTGGATTGTTTCATAAGCTGGTTGATGTCAGTAAATCCTTCCAAGTAAGAGTTCTTAATGTGTGTTTGTCAAATTTTCAAAGACGTCCTGAGCGAAAGACGATTACAAATTTTTTCCAGGGAGAGAAGGGAAATGCTCTTGGCCAGAATTATTTCACTAGCTTAGAAGATGCTTCTAAACCCGACAGTGACAATAAGCCCAAGTCTTGTGACATTCATCTTACATCTGAAACGAACCATAGCGAATCATCATCCGGCCTCCACTTGCTGCCACCAACAGCGACAAACTCAAACATTTCACACAATTCCAAGAAACCCGAATTTTCTAACAAATCATCAGTAGATGTATTCAGATCCTCTGAATTGTCAGGCAAAACAACAAAGTCCATTGGAACGACTGACATTATCTCACACTCAAAGTTTGTCAACAATTCCAAGAAAAGTTCAGTTTTCGAAGACTCCGCATCATCGTCTATTGTGTCGAAGAGATCAAGTAGAACAGGTCAGGCTGGGTCGGCATCTTTTTGTGATTCTCAATACTTATCAAGGAGTAATGTTAAATCTGATGCGAGCGACCGACACTCAGTTTTGTCTAAGACAACGACACTTCTAGCAAGTGACTTTGTGAGCCATCAAAACCTTAGTTCTAGAAAACCAGTTCTAGAATGTGGCTTTGTGATTCCTAAAGGAGTGAAAGATCATAATTTAAGTTATACTAAGAAAAATTCCGTTCTAGAAATTAACGCATTGATCCATCAAGGTACGAGAGACGAGAATTCAAGTTCTAAGAAAACTTCGGCCTTTGGGAAAGACTCAATGATCCCTGAAGGTGCGAGAAACCAGGATTCAAGTAGTTCTAATCAGTCTTCTGTTCTAAGATGTGACCTAGTGATTCCTGAAGGTGTGGACAGTAGTGTATTTGAATGTCTTCCTCATGATGTCCAAATGGAGTTTTACGAGCAATGGAAGAGGGACGCCCAATATCAGGCCAGCAGGACGGACAAGAAGCCACAGGGGCTCCGCAAGACCGATAAGAAGCCACAGGGGCTCCGCAAGACCGATAAGAAGCCAAAGGGGCTCCTCAGGTATTTCTTGAAGAGTTAA

Transcript

rna-XM_001630918.3

GGACTCGGCCTCAGTCTACGTCCGTGGGAAATTGCATCCCATATTTTGATTTGCAGTAGATTCACCTTGATAAACTCAGAATCTTTCCCTTCAAATCGGGCAGATGTATGGATACCAAGAAAACCATCTTCCCCCAAACAGTGATGGCGAGTGCGAAGTTGATGATTCCGAAGAGGAATGGCAAAAATGGCGAGTAAGACCCGTGTCTTTGACAGGCGCGCAATTACCGCCGCTCAAGAGACAAAAACTAGACTCCTTCCTTTCAACTTCGCTCAACGAAACTTCAAACGACCCTAGCACTGACAAACTCGGCACGAGCAAGCATAACAGAGTGATTGTGCACATAGACATTGACTGCTTCTATGCACAGGTTGAAATGATAAGAAACCCGTGTCTCAGAGATCGGCCTGTGGGTGTCTCGCAAAAACACATTCTCGTTACTTGTAATTACGTGGCACGGGCCATGGGACTTAAAAAGCTTATATCCTTAGCAGAAGCTAAAAAGAAATGCCCCGATCTAGTCATTATAAACGGAGAGGACTTGACGAAGTATAGAGAATTCTCAAGTAGGGTGACAAAGTTGTTGAGACGGTTTGCACTGCGGGTGGAAAGACTTGGTCTAGACGAGAATTATGTTGATGTCAGTGAATTGGTGCAAGAGAGAATGAAGCATGCGCCCCGTGGATCTTATATAGCTGTTGGTTGTATCTATGGTGACAACATTTTGAAAGGAAGCTCTAATGAGGTTTGTCCCTGTGGGTGCCATGAGAGACTGACTGTTGGATCAGTGATTGCTTCTGAGCTGCGGAAAGCAATTTTCGATGAGATAGGTTTGACTACCTGCGCAGGCATTGCTCACAACAAATTGCTGGCAAAGATAGCGGGGGAGCAGAACAAGCCAAATAAACAGACCCTACTGTACACAGAGAGAGTGGAAGGACTGATGGGACTCCTGCCAGTCAGGAAAGTACCAGGTATTGGACGCAGTACGTGTGCCCGGCTAGGCAGCCTTGGGATCACAACTATTGCAGAGCTTCAAGAATGCTCCAAGAAGGCCCTCCTGAATGAATTTAACTCCCAGGAAGTTAGAATCCTACATGCACTAAGCCACGGGGCGGATGACTCCCAGGTCAGCACAGATTCCATGCCGAAATCTATCAGCGAGGAAGACTCCTACAGCAACTTGTGCTCACTAGAGTCTGTGAAAACAAACCTAAGGGTTCTTATTGGTAATCTTATCCCAAGAATTACGGAAGATACAGGACATCCTCAGACGGTGCGACTGGCAATAAGGCGAGGTGGGCAAGCGCCCGGAGTCTACAAGAAGGAAAGCAGACAGTGTCCTGTCCCGGATAGGTTTGCAATGAATACGCCGAACTCTTCTGAAAAGATAAATGTGCTCTTTGGAACTGTATTTGGATTGTTTCATAAGCTGGTTGATGTCAGTAAATCCTTCCAAGTAAGAGTTCTTAATGTGTGTTTGTCAAATTTTCAAAGACGTCCTGAGCGAAAGACGATTACAAATTTTTTCCAGGGAGAGAAGGGAAATGCTCTTGGCCAGAATTATTTCACTAGCTTAGAAGATGCTTCTAAACCCGACAGTGACAATAAGCCCAAGTCTTGTGACATTCATCTTACATCTGAAACGAACCATAGCGAATCATCATCCGGCCTCCACTTGCTGCCACCAACAGCGACAAACTCAAACATTTCACACAATTCCAAGAAACCCGAATTTTCTAACAAATCATCAGTAGATGTATTCAGATCCTCTGAATTGTCAGGCAAAACAACAAAGTCCATTGGAACGACTGACATTATCTCACACTCAAAGTTTGTCAACAATTCCAAGAAAAGTTCAGTTTTCGAAGACTCCGCATCATCGTCTATTGTGTCGAAGAGATCAAGTAGAACAGGTCAGGCTGGGTCGGCATCTTTTTGTGATTCTCAATACTTATCAAGGAGTAATGTTAAATCTGATGCGAGCGACCGACACTCAGTTTTGTCTAAGACAACGACACTTCTAGCAAGTGACTTTGTGAGCCATCAAAACCTTAGTTCTAGAAAACCAGTTCTAGAATGTGGCTTTGTGATTCCTAAAGGAGTGAAAGATCATAATTTAAGTTATACTAAGAAAAATTCCGTTCTAGAAATTAACGCATTGATCCATCAAGGTACGAGAGACGAGAATTCAAGTTCTAAGAAAACTTCGGCCTTTGGGAAAGACTCAATGATCCCTGAAGGTGCGAGAAACCAGGATTCAAGTAGTTCTAATCAGTCTTCTGTTCTAAGATGTGACCTAGTGATTCCTGAAGGTGTGGACAGTAGTGTATTTGAATGTCTTCCTCATGATGTCCAAATGGAGTTTTACGAGCAATGGAAGAGGGACGCCCAATATCAGGCCAGCAGGACGGACAAGAAGCCACAGGGGCTCCGCAAGACCGATAAGAAGCCACAGGGGCTCCGCAAGACCGATAAGAAGCCAAAGGGGCTCCTCAGGTATTTCTTGAAGAGTTAACAATCCTAGGATGTATGGAAGTGAGTAGAGTAGAGAGAATAGTTTAGTTCATGTTAAATGGATAGACTTTGGGGGGTGGGCAGGGGCATCCCTTCGCCGTTTTCAACTTGAAGCCCAATTCCCGAATTATGATACGTGGGCGGTACGTAAACTTATGGACCCGAATATTTTTCTATCCATTTTCGTATATTGCCTGAGAGCGAGAAAAATCTaatcttacaatgttgctttGTTTCTGAGGGACCGTACAGGATGTGTTTCCCACTGATCAACCAATGTAGCACCGTGGCTGTGATTTCAGACTATAAAATTGTAATTGTATAATTCAAGTATActataaagaacaaaaataaaaaggcgtgttaatttttataattcatTCATGAGTTTTAAACATTTCAAAAGAgatcacaacaacacaagctTCTGATAACTGTTTTTGGGGTTCttagaagttttttttcctttttgatgACCGAGCATGTTTGCTGAATGATGTTTTGCTTTCATAAAAAGTAAggtatacatatatatattttctgtaagctgcttttaattatttttcatgGGAATGAATGCATCAAGATTAGACTAAAGGTTATGGGGTCGAAATAATTTTTCTCAACTgggaaaaaattataatgGATTGGGGAGGGCaatgttttgttaaaaaaaaacccttcgtTATAAGATATGGCTGTCGAACACTACTATGTAAGCCTTGAACCCGAAAAATCTTATTGGGATGTGAAAGAAGATACTAAAAGCTTTAAATTTAGGTGCCTGAGTCTTTGTTTAAAGTAAAAGGAAAAGATTTCAACCGTGAAAAGTCTGTTATAAAACACTAGCAACCGGGCGCGTTGGTTAAATGGACGTTTGCCgtaaaataaatttcaaataatttaatgtgtcattaattttttaatattcacaTTTACAGAATTGGTCTCTGTTAAATTTAGTGTGCCAAGTTTAAATCTGATTTGATCTAACAGAGGAAATACAGGAAACAGGCAAATTTTTGTTGTACGAATAGTTTTGACAATCTCTGCGGCAAACAGAACGAACGAAAGCTTTCTGACGACAATCACACTTCTCCATGCCAGATTCAAGAGAGTCGATATTTATTAACCGATACTTCATCGAAAGTCATCGTCTTTCAGTTTCCCATTCAGAGTTGAAAACAACACTCCGAATGCTTTCGCCTTTTACAAGTTCACCTTCCTTAAGGGCAATGAGTTCACCTTAGAAGACTAAATTAATATTCGTCTATTTTCACAGTGTTTTATAGTACTATAACTGGTACAAGCTTTGGCTTTGTTGTAGCATGTTCGACGAATGAAGGAAattggaaaattatttttctgtACGCGCGCGTTCCCGCTTTGGTGCTATTCAATTTTCGGCCAATCAGAGAGCGAGGCACCGACATTCGAaaatccacaggaatcccatcgTGACCACAGGAACTTTATCGTATAGCTATACCACTTTTCTTTGGCTATGGTGCTCCGCTAAAAGATACAATCGAAATAATGGAACTGGATGAACGGAGGAAAGCAAATAGTAAGAAAAGTAGATAACCAAATTAAACCCTTTCCCAAGAACATAACTCCCTTAAATGAtacaaaaaattcaaaaatgaTCGATTTTTTATAATATTCTTTGACCAAGGAGTAGGGCTACTAAATTCCAGTAACCTGAACCCTTGACAAAAATGTTGTCACCAATGTCGGTTTTTCAACATGAACCCCATACTAGCAATGCTGTCAACGTTTCGCGCAGCTAACTGCAGACAGACAATGCAACAAACGACTTCGCAGCACAACAGCGATTTTTACTGCTTTTGAAACAATACCAGCGCTGTTTGTACAGGGCTTCGTGGTTGTGTCATGGAAAAGCAGGGACTGGGCTCTAGACATAGTAGCACGTGCTTGATTACGTCCTTTCCCCTCTTGGGCACAAAATGAGGACTTGAAGTGTTTTCTTCGTCGTTTTCGCCTTTTAATGACCTCGTACGTCACGTAAAGTGCCGTGAATCTTATCTAAGATATCCCGAGTATTAGCGGCATCTTCTCTCAAGAACTCATTAATGCTGCTTTCAAGAAGCTATACATATAAGCCTTGTTTTGAATGCACAGTCATGAGAAAATTGGCCCCACGCCGTCTGTTATTGTTGGTGTAAAAGCCCATTTGATCTAAAGGGACTCGCTTCTGAAGTGTATGCTGCTTAAATGTATCGTTAAATGTCTTTGCATTTTTCCGCGATCGATACAAGTCACTTAGAAACACAAAACCAGCCAAGTCTCTCTTAATACTACTTTTCTTGATGAAGTAGAAAATGGTTATCGTCTTCTAAATAACAAATTAGAAATGTTTTAGGGATATTACGAGATTTGGATCATTCTTAGACCTAAAACTAgttaaaatgataataaaaatttaataaaacgTTGCAGGCTATCTCTTATTACGATAGTGATAAAGATATGTTGTTTCTAGGTGAAGATCATAAAATTTGCGAATTGAAGTCTTATCTTTTCGGTAGCCTAAGGCGAAAATGACCACTTCTATGATACTGAgctcgg

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9UNA4	DNA polymerase iota OS=Homo sapiens OX=9606 GN=POLI PE=1 SV=3
Q6R3M4	DNA polymerase iota OS=Mus musculus OX=10090 GN=Poli PE=1 SV=1
Q9VHV1	DNA polymerase iota OS=Drosophila melanogaster OX=7227 GN=PolI PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010062 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00817 all species →	IMS	impB/mucB/samB family	Family	Interproscan
PF11799 all species →	IMS_C	impB/mucB/samB family C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036775 all species →	Homologous_superfamily	DNA polymerase, Y-family, little finger domain superfamily	Interproscan
IPR001126 all species →	Domain	UmuC domain	Interproscan
IPR043128 all species →	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR017961 all species →	Domain	DNA polymerase, Y-family, little finger domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46404 all species →	DNA POLYMERASE IOTA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003684 all species →	Molecular Function	damaged DNA binding	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0003887 all species →	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0019985 all species →	Biological Process	translesion synthesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03510	POLI; DNA polymerase iota	EC:2.7.7.7	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_001630968.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

37TPM > 0

16Conditions

3.2Max TPM

1.7Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	2.14	2.47
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	2.13	2.42
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	2.59	3.08
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	1.73	1.84
whole 6 week old aboral regenerate · regenerate uncut	3	3	2.06	2.22
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	1.60	2.83
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	1.36	2.10
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	2.34	2.74
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	1.18	1.92
whole 6 week old aboral regenerate · regenerate 20hpa	3	2	1.08	1.84
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	1.74	2.03
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	1.44	2.21
whole 6 week old aboral regenerate · regenerate 60hpa	3	2	1.38	2.23
whole 6 week old aboral regenerate · regenerate 48hpa	3	1	0.86	2.58
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	2.06	3.16
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	0.71	2.14

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	2.47
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	2.38
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	1.58
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	2.42
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	2.07
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	1.90
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	3.08
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	2.38
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	2.32
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	1.84
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	1.79
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	1.56
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	2.22
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	2.04
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	1.92
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	2.83
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	1.96
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	2.10
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	1.98
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	2.74
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	2.27
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	2.00
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	1.92
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	1.62
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	1.84
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	1.40
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.00
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	2.03
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	1.69
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	1.51
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	2.21
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	2.11
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	2.23
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	1.91
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	0.00
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	2.58
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	3.16
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	3.02
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	2.14
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.