Gene detail

Detailed information of XP_001631967.1 in Nematostella vectensis

Genomic Location: NC_064037.1:2916531...2922360
NR annotation: XP_001631967.1, large neutral amino acids transporter small subunit 3 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_001631917.3

ATGACCAACACAGGTAACACTCAACTTTCATCTTTCCGCCTCTGGGTGCTATTCGTGGTGTCGGTGGTGGAAATGTCCCTGTTCGCCTCGCCTCTGCTGGGATGGTCCTCCTTGGTGTTTGTTCtcaagggggagagggttttcTTCCATCTGTGTCCTGAGAATGTCACTCGATTGGTTCCCTCTGATAATGATGAGCTCCGTGGCTGCGGGGCGCAAGATGATCGCCTCAATCTCGCGCTTACCATCGCCTGCTTTGTTAACGCCATCATGATGTTCGTCATGGGctgggctatcgacagggtTGGCGCCAAAATGGTCAAGATACTTTCAAGTGTCCTGTTCGCCATGTCCGGGGGATTTCTAGCCCTCACAACACAAAGAACTCCCATGATGCTGTTCGCAACTCTTTTGGTGATGGGGGTTGCTTATGCTGGAATATACGCATCCATCACGCGAGGCGTAACCGCttttggcaaatggcagtcgGTGGTGAACAGTGCGTATAATTGCGCCATGCAGTCTTCGGCCCTTACATTCCTTCTTGTTAAGATGCTGTACGAGCATGGCGTAGCGTACCAGACACTGTGCTACGGGTTCGTAGGTGCATGCACGGCTCTTTTCCTGAGTAGCGTCGTCGTATTTCCCAACATTCAAAACAACACTTCCAACTCCACCACCAAACCTGACAAAATGAGCGAAGCAGCCAGCGGTGATCTCCTAGGGCACATGCGTCGTTGCGTGAAGGAGCtgtatggtcacgtgactggTGGTGTGTTTGTGTGGACTTGTTTATTTCTCGGGCTGTGTCGATGGAGGCTATGGTTCTTTCTGGCGTCTTTCCAAAAGTTTATGGAAGCACAGCCAGGCACCACTACCGAAACAGTGCGGTCCTACGCCAACTATTACGGAATCATTCAGATGTGTAGTTTAGCTATGTGCCCGATGCTTGGCGCACTGATAGCCGCTGGACGAGGAACGCTTTCCTTCAAGTCCCTCGCCAACGCGTGCAAACGCCAGGGCGACAAAGTAACCACCAAGATTGCCGAGGAGGGCTTACTTGAGACCGAGGCAGGCGTGATGAAGATCCACAGTCACGTGACTAGTACCCAAACCGTGTGTTGCGCCCGTGAGGTCCGTGGCTGCATGGCCGCGTTTGGTGGGAGTGGTGTTGTGTTGGTCGCCATCAACGTACTAGCCCTAATCCCAAGCGTGAACCTGCAGCTTCTCACGTTCACCCTAATCTCCGCCCTGAGATGTTTTTACAATGGTGGAGTGTCTAATCTATTTCTTGTCGCGTTTCCACTGGAAGATTATGGAAAGCTGATGGGAATAAGTGCCATTATTACCGCTGCCATACAAGCTCTACAGTACCCGACATTTGTTAGCTTGGAAACGGTCTTTGATGGCGACATCATCTGGTTGAACACCATGTTTCTCGTCCTCTCCTTACCACTCAGcgttgggctacctgtgttctTGTGGCGCTACTCGAGGAAACTGGACCGGCAAGCTGTGACGTCACCGCATGACATGTGTCAGACCACCATCGTTGTGGAGAGCATTGTTTATGAAAGATTGACAGTTGTGTAGTGCAAGCTTAGCAAAGATTCTCTAGCCACCGTGCGGCCTGATGAACAGTGCACAGCGAAGTGCAAGAAAAAGGGTTAAGGGCGCTCGTCTACACGAgcaaatttcattttgcaaATGTGCATATGGCACATTGTATGTAAGGGGTTGCGTATCCCAGTCCCAAAAAGTGTTCTACAGTGTAAGTAGAGCAAAATATACGAATAGTTGGATGAGATTAAACGCTACTAGACATACAGCAGACCAGCGGCAAGTCGGCACGTGGACGCGAGCTCGTACTTGGCTTGAGCATGCAGATAATTCCGATAAATTAATACTTCTCTAGCAAAcagctaaaaaataaattaaagcgACTACTGTTGGaataattatttgaaaatGAAACATTGTTCTCTTTAA

Protein

Uniprot

Uniprot term	Description
Q8BSM7	Large neutral amino acids transporter small subunit 3 OS=Mus musculus OX=10090 GN=Slc43a1 PE=1 SV=1
O75387	Large neutral amino acids transporter small subunit 3 OS=Homo sapiens OX=9606 GN=SLC43A1 PE=1 SV=1
Q5RF58	Large neutral amino acids transporter small subunit 4 OS=Pongo abelii OX=9601 GN=SLC43A2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20766	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015175	Molecular Function	neutral L-amino acid transmembrane transporter activity	Interproscan
GO:0015179	Molecular Function	L-amino acid transmembrane transporter activity	Interproscan
GO:0015804	Biological Process	neutral amino acid transport	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08230	SLC43A3; MFS transporter, LAT3 family, solute carrier family 43, member 3	-	Transporters	ko02000	deepkoala