Gene detail

Detailed information of XP_001632077.2 in Nematostella vectensis

Genomic Location: NC_064034.1:20811350...20823735
NR annotation: XP_001632077.2, glutamine--tRNA ligase [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5511659

ATGTTGGTTACGTTTCGTAGAACTTTACAATTATCTGCCAAAACTCCCTATATTTTAGGAATTCGAACAATTTGCACCTCCACCACCATGGCAGATAGGCTATCGCTGTTCCAGAGCATTGGTCTGAGTCAACAAAAAGCCAAGGAGACCATGAAAAACGAAGCCCTTTCTCAGAAACTTGAGAAAATTGTTACACAGGCTCACAGTAAAGGTGAAAGCGACAAACAGAGTGGGACTCTACTGTACGTTCTAGCAAGCAGTAGCTTGAAGGAGGAGTCTCGGGTGTCGTTACTGGTGGATTACATCTGCAGCAAGAAGGTCTCCTCGAGTGCACAACTGACAGCTGCGTTCGAATATCTCACCAAGACCAGTCCTGTGGGACCCATCGATGCATGCAAGTTTGAGCAGCATTGCGGAATTGGTGTTGAAATCACCCCAGAACAGATAGAGGAGTGTATTGAACAAATTATTAATGAACATAAAGACGAGCTGCTCGAAAAGCGTTACAACTTCAACACAGGGCTGATAATCGGGAAAGCTAGAGACAGACTTAAGTGGGCTGATGGGAAAGCAATGAAAGCTGAAATGGACATGCAGATTCTTGACTTGCTTGGTCCCAAAACCGAGGCAGACATGCAGAAGCCAAAAGACAAGGATGCTAAGCAGTCTAAGGGGCAGAAGAAAAAGGGTGGGGTCGCCAACAACAAACCTGCAGTTGTGAATGGAGATGCATCCAATGGTGATGACAGCAGTGCTCTGACAGGAGAAATTGCAAGGTTTCACAAACCTGGAGATAACTATCACACACCGGGATATGTGGTGACGCCAAAAACAATGCAGCTGCTAAAAGAACATCTTGAGAGAACAAAAGGAAGGGTGCAGACTAGGTTCCCACCAGAGCCAAATGGTATTCTACACATCGGCCATGCTAAAGCTATCAATATCAACTTTGGTTATGCAAAGGCGCACAATGGGGTGTGTTACCTACGGTATGATGACACTAACCCTGAGAAAGAAGAAGAGAAGTTTTTCACTGGAATACTGGACATGGTGAAATGGCTAGGTTTTGAGCCATGGAAGATCACCCATGCCTCTGACAACTTTGACAAGCTGTATGAGTATGCTGTTGAGCTGATCAAGCGGGGGGATGCATATGTGTGTCATCAGCAATACGAGGAGATCAAGGGGTACAACCCCCCGCCCAGCCCCTGGAGGGAGCGCCCCATTGAGGAATCCCTCAGACTCTTTGAGGATATGAAGAAAGGAAAACTTGATGAGGGACAGGCAACACTCAGGATGAAGACTACCCTAGAAGATGGAAAGGCAGACCCTGTCGCGTACAGGATCAAGTTCACCCCTCACCACCGGTCAGGGGACAAATGGTGCATTTATCCAACTTATGACTTCACCCACTGTCTGTGTGACTCCATTGAGGACATCACACATTCTCTTTGCACAAAGGAATTCCAGTCAAGGCGGTCCTCTTATTACTGGCTTTGTAATGCTCTGGATATTTACTGCCCTGTGCAGTGGGAATATGGCAGGCTGAATCTCAGCTACACTGTTGTATCCAAGAGAAAGATTGGCAAACTAATTAATGAAGGCATTGTCAGGAATTGGGATGACCCCAGACTGTTCACTCTGACAGCCCTTCGAAGACGAGGCTTCCCAGCGGAGGCAATCAATAAGTTCTGCAGCAAGGTTGGCGTTACCATGGCTCAGACAGTAATAGACCCTCTGATGCTGGAAGCATGCGTCAGAGATGAGCTCAATTTGACTGCCACGAGGGTCATGGCTGTTTTAGAGCCTCTAAAAGTGACTATAACAAACTTCCCATCAGATAAGGCCATGATGATAGAAGTGCCCAACTTGCCAATGGATGCCAGCAAGGGCAACCACAAGGTCCCATTTGACAGAGTTCTCTACATTGAGAGTTCAGACTTCAGAGAGACTATGGAGAAGGGTTACAGAAGACTCACACCAGAACAGTCTGTTGGTCTTAGACATGCTGGATATGTCATCAAGGTTAAGAAAGTTATCAAGAATGCAAGTGGAGAGGTGTCTGAACTAGAGGTTACTTGTGAACTGACCTCCTCCACCGACAAGCCCAAGGCATTCATCCACTGGGTGGCATCAACCGCAGTACCATGTGAGATCAGACTTTATGACAGACTATTCAAGCATAAAAACCCTGAGGATCCAGAGGAGGTGCCTGGTGGCTTTGTCAGCGACTGCAACAAGGACTCATTGACAGTGATACCTAATGCCTTGGTTGACATCACTGCAAAGGGTGCTGCTCCGTTCACCAAGTTTCAGTTTGAGCGACAGGGCTACTTCTGTGTGGATCCCGATTCTAGCAAGAACAAGCTTGTTTTTAACCGAACTGTAGCTTTGAAGGAAGATGCTGGCAAAATTTAA

Transcript

rna-XM_001632027.3

CGGTTGACTTTTGAAGGCCTTTTCTCTCCATGTTGGTTACGTTTCGTAGAACTTTACAATTATCTGCCAAAACTCCCTATATTTTAGGAATTCGAACAATTTGCACCTCCACCACCATGGCAGATAGGCTATCGCTGTTCCAGAGCATTGGTCTGAGTCAACAAAAAGCCAAGGAGACCATGAAAAACGAAGCCCTTTCTCAGAAACTTGAGAAAATTGTTACACAGGCTCACAGTAAAGGTGAAAGCGACAAACAGAGTGGGACTCTACTGTACGTTCTAGCAAGCAGTAGCTTGAAGGAGGAGTCTCGGGTGTCGTTACTGGTGGATTACATCTGCAGCAAGAAGGTCTCCTCGAGTGCACAACTGACAGCTGCGTTCGAATATCTCACCAAGACCAGTCCTGTGGGACCCATCGATGCATGCAAGTTTGAGCAGCATTGCGGAATTGGTGTTGAAATCACCCCAGAACAGATAGAGGAGTGTATTGAACAAATTATTAATGAACATAAAGACGAGCTGCTCGAAAAGCGTTACAACTTCAACACAGGGCTGATAATCGGGAAAGCTAGAGACAGACTTAAGTGGGCTGATGGGAAAGCAATGAAAGCTGAAATGGACATGCAGATTCTTGACTTGCTTGGTCCCAAAACCGAGGCAGACATGCAGAAGCCAAAAGACAAGGATGCTAAGCAGTCTAAGGGGCAGAAGAAAAAGGGTGGGGTCGCCAACAACAAACCTGCAGTTGTGAATGGAGATGCATCCAATGGTGATGACAGCAGTGCTCTGACAGGAGAAATTGCAAGGTTTCACAAACCTGGAGATAACTATCACACACCGGGATATGTGGTGACGCCAAAAACAATGCAGCTGCTAAAAGAACATCTTGAGAGAACAAAAGGAAGGGTGCAGACTAGGTTCCCACCAGAGCCAAATGGTATTCTACACATCGGCCATGCTAAAGCTATCAATATCAACTTTGGTTATGCAAAGgcgCACAATGGGGTGTGTTACCTACGGTATGATGACACTAACCCTGAGAAAGAAGAAGAGAAGTTTTTCACTGGAATACTGGACATGGTGAAATGGCTAGGTTTTGAGCCATGGAAGATCACCCATGCCTCTGACAACTTTGACAAGCTGTATGAGTATGCTGTTGAGCTGATCAAGCGGGGGGATGCATATGTGTGTCATCAGCAATACGAGGAGATCAAGGGGTACAACCCCCCGCCCAGCCCCTGGAGGGAGCGCCCCATTGAGGAATCCCTCAGACTCTTTGAGGATATGAAGAAAGGAAAACTTGATGAGGGACAGGCAACACTCAGGATGAAGACTACCCTAGAAGATGGAAAGGCAGACCCTGTCGCGTACAGGATCAAGTTCACCCCTCACCACCGGTCAGGGGACAAATGGTGCATTTATCCAACTTATGACTTCACCCACTGTCTGTGTGACTCCATTGAGGACATCACACATTCTCTTTGCACAAAGGAATTCCAGTCAAGgcggtcctcttaTTACTGGCTTTGTAATGCTCTGGATATTTACTGCCCTGTGCAGTGGGAATATGGCAGGCTGAATCTCAGCTACACTGTTGTATCCAAGAGAAAGATTGGCAAACTAATTAATGAAGGCATTGTCAGGAATTGGGATGACCCCAGACTGTTCACTCTGACAGCCCTTCGAAGACGAGGCTTCCCAGCGGAGGCAATCAATAAGTTCTGCAGCAAGGTTGGCGTTACCATGGCTCAGACAGTAATAGACCCTCTGATGCTGGAAGCATGCGTCAGAGATGAGCTCAATTTGACTGCCACGAGggtCATGGCTGTTTTAGAGCCTCTAAAAGTGACTATAACAAACTTCCCATCAGATAAGgcCATGATGATAGAAGTGCCCAACTTGCCAATGGATGCCAGCAAGGGCAACCACAAGGTCCCATTTGACAGAGTTCTCTACATTGAGAGTTCAGACTTCAGAGAGACTATGGAGAAGGGTTACAGAAGACTCACACCAGAACAGTCTGTTGGTCTTAGACATGCTGGATATGTCATCAAGGTTAAGAAAGTTATCAAGAATGCAAGTGGAGAGGTGTCTGAACTAGAGGTTACTTGTGAACTGACCTCCTCCACCGACAAGCCCAAGGCATTCATCCACTGGGTGGCATCAACCGCAGTACCATGTGAGATCAGACTTTATGACAGACTATTCAAGCATAAAAACCCTGAGGATCCAGAGGAGGTGCCTGGTGGCTTTGTCAGCGACTGCAACAAGgaCTCATTGACAGTGATACCTAATGCCTTGGTTGACATCACTGCAAAGGGTGCTGCTCCGTTCACCAAGTTTCAGTTTGAGCGACAGGGCTACTTCTGTGTGGATCCCGATTCTAGCAAGAACAAGCTTGTTTTTAACCGAACTGTAGCTTTGAAGGAAGATGCTGGCAAAATTTAACCAAGGATCACACATAATCTtttgaaatagaaataatgaaaaacacctgtattattttattatctgATTTGTGACCTGATAGTAGGGCACAGTCCATAAGGCAAtgtaaagtaaaataaaagtcTGTGTCAATATTTAAAGATTGATATTACTGTC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P47897	Glutamine--tRNA ligase OS=Homo sapiens OX=9606 GN=QARS1 PE=1 SV=1
Q3MHH4	Glutamine--tRNA ligase OS=Bos taurus OX=9913 GN=QARS1 PE=2 SV=1
Q66H61	Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002736 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00749 all species →	tRNA-synt_1c	tRNA synthetases class I (E and Q), catalytic domain	Domain	Interproscan
PF03950 all species →	tRNA-synt_1c_C	tRNA synthetases class I (E and Q), anti-codon binding domain	Domain	Interproscan
PF04557 all species →	tRNA_synt_1c_R2	Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2	Family	Interproscan
PF04558 all species →	tRNA_synt_1c_R1	Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1	Family	Interproscan
PF20974 all species →	tRNA-synt_1c_C2	tRNA synthetases class I (E and Q), anti-codon binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000924 all species →	Family	Glutamyl/glutaminyl-tRNA synthetase	Interproscan
IPR050132 all species →	Family	Glutamine/Glutamate--tRNA Ligase	Interproscan
IPR011035 all species →	Homologous_superfamily	Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily	Interproscan
IPR042558 all species →	Homologous_superfamily	Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminal, subdomain 1	Interproscan
IPR020058 all species →	Domain	Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain	Interproscan
IPR042559 all species →	Homologous_superfamily	Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminal, subdomain 2	Interproscan
IPR014729 all species →	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR020059 all species →	Domain	Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain	Interproscan
IPR004514 all species →	Family	Glutamine-tRNA synthetase	Interproscan
IPR001412 all species →	Conserved_site	Aminoacyl-tRNA synthetase, class I, conserved site	Interproscan
IPR020056 all species →	Homologous_superfamily	Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal	Interproscan
IPR007638 all species →	Domain	Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain 2	Interproscan
IPR007639 all species →	Domain	Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminal	Interproscan
IPR049437 all species →	Domain	tRNA synthetases class I (E and Q), anti-codon binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43097 all species →	GLUTAMINE-TRNA LIGASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0004812 all species →	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0043039 all species →	Biological Process	tRNA aminoacylation	Interproscan
GO:0004819 all species →	Molecular Function	glutamine-tRNA ligase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006425 all species →	Biological Process	glutaminyl-tRNA aminoacylation	Interproscan
GO:0017101 all species →	Cellular Component	aminoacyl-tRNA synthetase multienzyme complex	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006418 all species →	Biological Process	tRNA aminoacylation for protein translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01886	QARS, glnS; glutaminyl-tRNA synthetase	EC:6.1.1.18	Transfer RNA biogenesis	ko03016	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_001632077.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

46TPM > 0

16Conditions

52.2Max TPM

35.6Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	35.80	37.96
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	31.75	42.30
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	34.07	35.28
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	35.58	36.56
whole 6 week old aboral regenerate · regenerate uncut	3	3	32.55	34.37
whole 6 week old aboral regenerate · regenerate 4hpa	3	3	42.50	48.94
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	37.72	41.45
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	37.46	42.27
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	26.51	43.11
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	39.22	41.71
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	37.44	40.59
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	39.32	47.15
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	38.33	44.03
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	24.63	41.51
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	37.50	39.15
whole 6 week old aboral regenerate · regenerate 12hpa	3	3	39.66	52.22

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	37.96
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	35.48
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	33.97
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	42.30
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	27.30
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	25.65
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	35.28
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	34.93
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	31.99
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	36.56
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	36.41
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	33.76
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	34.37
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	32.78
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	30.51
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	48.94
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	44.58
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	33.98
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	41.45
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	36.56
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	35.16
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	42.27
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	35.47
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	34.64
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	43.11
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	36.43
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	41.71
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	39.37
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	36.57
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	40.59
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	38.35
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	33.37
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	47.15
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	35.53
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	35.28
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	44.03
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	38.66
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	32.28
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	41.51
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	32.39
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	39.15
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	38.76
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	34.59
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	52.22
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	38.76
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	28.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.