Gene detail

Detailed information of XP_001633360.2 in Nematostella vectensis

Genomic Location: NC_064037.1:4519675...4548939
NR annotation: XP_001633360.2, exportin-2 isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5513067

ATGCGGCTTGGGGTAGAAATGGACGCCGAATCTCAAGCGCTGGCAACTTGTTTGCAGCAAACTTTATCTCCTGACGCGGCCACTCGCAAGCAAGCCGAGAGGTCTTTGGAGTCAGTGGAGGGGACTCCTAGTTATGCGATGATGCTGTTGCGACTGGTTGACTCAAACGCCGGTGATATGGTCATCAGGATCTCTGCTGCTGTTGCTTTTAAAAACTTGGTCAAGAAACACTGGAGAATTGTTGAGGGGGAGCCAAGCAAAATAAACCCTGCTGACAGACAAGCCGTAAAAACTGAAATAGTGGATCTGATGTTGAGAAGTCCAGAACAACTGCAGAAACAGCTCAGTGATGCAATCAGTGTCATTGGGATGGAGGATTTTCCAGACAAATGGGAAGACTTGTTACCAGGAATGGTAAAGAGGTTTGAAAGTGGCGATTTCCATTTGATAAATGGTGTCCTGCAGACGGCTCACTCCCTTTTCAAAAGATATAGACATGAGTTCAAATCACAGGAGTTATGGACTGAGATCAAGTTTGTGCTAGAGAAATTTGCCCAACCTTTGACCACTTTATTTAAGGCTATAATGGAAGAGGCAAACAAGTGTGGTGGGGATCTCAAGAAGCTTAAAGTGATTTTCAACTCGATCTTATTCATTTGCAAAATCTTCTACAGTCTAAATTTCCAGGATTTGCCTGAACACTTTGAGGATAACATGGAGCTGTGGATGAAGAATTTCCTGATTCTCTTAACAATTGACAACAAGACACTGGAATCTGAGGAAAGCGAAGAAGCTGGATCCCTGGAGCTTGTCAAGTCCCAGATCTGTGACAATGTTGGCCTTTATGCTCAGAAATATGATGAGGAATTTGAGACCTACCTCCCAAAGTTTGTGGATGCCATTTGGCATTTGCTGCTTTCCACAAGTAACAACATCAAGCATGACCTGCTGGTCAGTAATGCCATCCAATTCCTGGCTTCTGTATCAGAAAGACCAAACTACAAGCAACTGTTTGAAGATCAGGCAACACTGCAGAGCATTTGTGAGAAAGTCATTGTTCCTAACATGGAGTTCAGAGATGAGGATGAAGAAGTTTTTGAAGACAACCCTGAAGAATACATCAGACGAGATATTGAAGGCTCAGATGTTGACACAAGGCGTCGTGCGGCATGTGACCTTGTCAGAGGTCTGTCCAAGTTCCATGAGCAACCTGTTATTGCGATTTTTCATCATTACGTCATGGCATTGCTGGAGCAATATCAGACAACAAAGGAACAAAACTGGAGAGCCAAAGATGCTGCCATATTCCTTGTTACATCTCTTGCTTCTAAAAAGCAAACTGCAAAGCATGGGACAACAAAAGCAAGTGAGCACTTTGACCTCCATGACTTCTACACAAAGTACATTCTTCCTGAGCTGCAAGTCAAGAACTTGGATGAACATCCTGTTTTGAAGGCTGATGCTATCAAATATGTCATAACCTTTAGAAGCATGCTGACACGCGAGATGATTGTTGGTGTAGTCCCTATCTTGGTAGACCACTTAGCTGCCAAGAGTATAGTAGTACATAGTTATGCTGCATATTGCCTGGATAGACTGTTCACACTGAAGAACCCTGCTGGAGGGCCACTGATTACCAAGGAAGAGGTAAAACCATGCATGGAGAAACTCCTGACTAATCTATTCAACGCTCTTACCGTCCAAGGCTCTGAGGAGAATGAATACATAATGAAAGCAATCATGCGCTCTCTGTCCTTGCTCCAAGACACTGTGGTTCCTTATATTGGTGTTGTGGTTGCCAAGCTCAGTGAAAAGCTCACACTTGTTGCTAAGAACCCCAGCAAGCCGCAGTTTAACCATTACCTGTTTGAGGCTATTTCCTGCGCAATCAAAGCGACCTGCAAGTCCAATGTGGCTGCCGTTTCTGGCTTTGAGCAGACACTCTTCCCCATCTTCAGCGAGATGTTAACTCAAGATGTTACTGAATTTTTACCGTATGTCTTCCAAGTTCTTTCCTTACTGTTGGAAACCAGGCAGGAGGATATCCCTGAGGCATACATGCAACTCTTCCCACTCCTGCTAACTCCTCTTTTGTGGGAGAGAACAGGTAATATCCCTCCCCTGACTAGACTTCTGCAGGCGTACATCCAGAAGGGCAGCAAGCACATCGTGGCTGGAAACATGCAGGATGCCATCTTGGGCGTCTTCCAGAAGTTAATCGCCTCACGGGCTAACGATCATGAAGGATTCTATCTTCTTGGGTCTATGGTGGAGCATATTGAGCCGGCCGGCCTTGAGAAGCAAATCAAACAAGTCTTTCTTTTGTTGCTCCAGCGTCTCCAGAGCTCAAAGACAACCAAATATATAAAAGGATTGTTGGTGTTTCTGTGTCTGTACGTGGTCAAGTATAGCGGGACGATTCTCATAGAGTTGATAGACTCTATACAGGCCAAGTTATTTGGGATGATCGTCGAGAAATGCTTTGTTCCTGATCTGCAAAAGGTTTCCGGTACTATGGAAAGGAAGATCTGCGCTGTAGGCGTCACCAAGCTGTTGTGTGAACCCACGGCCATGTGGAACACATATCCAGAACTATGGGTATCCATGCTGCAGCTGTTGATCCAAGTGTTTGAGCTCCCTGAAGATGACTCTACCCCGGATGACGAGCACTTTATCGATATTGAGGATACACCGGGGTACCAAACGGCCTACTCACAGCTGGTATTTGCCGGTAAGAAGGAGTCCGATCCTTTCGGCGGGACGGTCCCGAATGCTAAGCTGTACCTTGTGCAGTCCCTAGTTACGCTCTCCCAAGCCTTCCCAGGAAAGATACTACCAAAAATAACTGCTGAGCTCCATGCAGATGCAGTAAAATTCTTGGAAAAGTACCTCCAAGAGACTGGTGCCGCGCTCAGCTGA

Transcript

rna-XM_001633310.3

TAGACATGCGTTTGGCGCTCAATGCCCTGTATTCAAAAGTACAAATTGCAGTCACGTAATATTCGCTGTCAATTCAGTGTAATTAAGGCATAACTTGCCTCTGCAAACCTCTGTTGCTAAAACACAAGAAATTGTTAGTGTTCGGATGCGGCTTGGGGTAGAAATGGACGCCGAATCTCAAGCGCTGGCAACTTGTTTGCAGCAAACTTTATCTCCTGACGCGGCCACTCGCAAGCAAGCCGAGAGGTCTTTGGAGTCAGTGGAGGGGACTCCTAGTTATGCGATGATGCTGTTGCGACTGGTTGACTCAAACGCCGGTGATATGGTCATCAGGATCTCTGCTGCTGTTGCTTTTAAAAACTTGGTCAAGAAACACTGGAGAATTGTTGAGGGGGAGCCAAGCAAAATAAACCCTGCTGACAGACAAGCCGTAAAAACTGAAATAGTGGATCTGATGTTGAGAAGTCCAGAACAACTGCAGAAACAGCTCAGTGATGCAATCAGTGTCATTGGGATGGAGGATTTTCCAGACAAATGGGAAGACTTGTTACCAGGAATGGTAAAGAGGTTTGAAAGTGGCGATTTCCATTTGATAAATGGTGTCCTGCAGACGGCTCACTCCCTTTTCAAAAGATATAGACATGAGTTCAAATCACAGGAGTTATGGACTGAGATCAAGTTTGTGCTAGAGAAATTTGCCCAACCTTTGACCACTTTATTTAAGGCTATAATGGAAGAGGCAAACAAGTGTGGTGGGGATCTCAAGAAGCTTAAAGTGATTTTCAACTCGATCTTATTCATTTGCAAAATCTTCTACAGTCTAAATTTCCAGGATTTGCCTGAACACTTTGAGGATAACATGGAGCTGTGGATGAAGAATTTCCTGATTCTCTTAACAATTGACAACAAGACACTGGAATCTGAGGAAAGCGAAGAAGCTGGATCCCTGGAGCTTGTCAAGTCCCAGATCTGTGACAATGTTGGCCTTTATGCTCAGAAATATGATGAGGAATTTGAGACCTACCTCCCAAAGTTTGTGGATGCCATTTGGCATTTGCTGCTTTCCACAAGTAACAACATCAAGCATGACCTGCTGGTCAGTAATGCCATCCAATTCCTGGCTTCTGTATCAGAAAGACCAAACTACAAGCAACTGTTTGAAGATCAGGCAACACTGCAGAGCATTTGTGAGAAAGTCATTGTTCCTAACATGGAGTTCAGAGATGAGGATGAAGAAGTTTTTGAAGACAACCCTGAAGAATACATCAGACGAGATATTGAAGGCTCAGATGTTGACACAAGGCGTCGTGCGGCATGTGACCTTGTCAGAGGTCTGTCCAAGTTCCATGAGCAACCTGTTATTGCGATTTTTCATCATTACGTCATGGCATTGCTGGAGCAATATCAGACAACAAAGGAACAAAACTGGAGAGCCAAAGATGCTGCCATATTCCTTGTTACATCTCTTGCTTCTAAAAAGCAAACTGCAAAGCATGGGACAACAAAAGCAAGTGAGCACTTTGACCTCCATGACTTCTACACAAAGTACATTCTTCCTGAGCTGCAAGTCAAGAACTTGGATGAACATCCTGTTTTGAAGGCTGATGCTATCAAATATGTCATAACCTTTAGAAGCATGCTGACACGCGAGATGATTGTTGGTGTAGTCCCTATCTTGGTAGACCACTTAGCTGCCAAGAGTATAGTAGTACATAGTTATGCTGCATATTGCCTGGATAGACTGTTCACACTGAAGAACCCTGCTGGAGGGCCACTGATTACCAAGGAAGAGGTAAAACCATGCATGGAGAAACTCCTGACTAATCTATTCAACGCTCTTACCGTCCAAGGCTCTGAGGAGAATGAATACATAATGAAAGCAATCATGCGCTCTCTGTCCTTGCTCCAAGACACTGTGGTTCCTTATATTGGTGTTGTGGTTGCCAAGCTCAGTGAAAAGCTCACACTTGTTGCTAAGAACCCCAGCAAGCCGCAGTTTAACCATTACCTGTTTGAGGCTATTTCCTGCGCAATCAAAGCGACCTGCAAGTCCAATGTGGCTGCCGTTTCTGGCTTTGAGCAGACACTCTTCCCCATCTTCAGCGAGATGTTAACTCAAGATGTTACTGaATTTTTACCGTATGTCTTCCAAGTTCTTTCCTTACTGTTGGAAACCAGGCAGGAGGATATCCCTGAGGCATACATGCAACTCTTCCCACTCCTGCTAACTCCTCTTTTGTGGGAGAGAACAGGTAATATCCCTCCCCTGACTAGACTTCTGCAGGCGTACATCCAGAAGGGCAGCAAGCACATCGTGGCTGGAAACATGCAGGATGCCATCTTGGGCGTCTTCCAGAAGTTAATCGCCTCACGGGCTAACGATCATGAAGGATTCTATCTTCTTGGGTCTATGGTGGAGCATATTGAGCCGGCCGGCCTTGAGAAGCAAATCAAACAAGTCTTTCTTTTGTTGCTCCAGCGTCTCCAGAGCTCAAAGACAACCAAATATATAAAAGGATTGTTGGTGTTTCTGTGTCTGTACGTGGTCAAGTATAGCGGGACGATTCTCATAGAGTTGATAGACTCTATACAGGCCAAGTTATTTGGGATGATCGTCGAGAAATGCTTTGTTCCTGATCTGCAAAAGGTTTCCGGTACTATGGAAAGGAAGATCTGCGCTGTAGGCGTCACCAAGCTGTTGTGTGAACCCACGGCCATGTGGAACACATATCCAGAACTATGGGTATCCATGCTGCAGCTGTTGATCCAAGTGTTTGAGCTCCCTGAAGATGACTCTACCCCGGATGACGAGCACTTTATCGATATTGAGGATACACCGGGGTACCAAACGGCCTACTCACAGCTGGTATTTGCCGGTAAGAAGGAGTCCGATCCTTTCGGCGGGACGGTCCCGAATGCTAAGCTGTACCTTGTGCAGTCCCTAGTTACGCTCTCCCAAGCCTTCCCAGGAAAGATACTACCAAAAATAACTGCTGAGCTCCATGCAGATGCAGTAAAATTCTTGGAAAAGTACCTCCAAGAGACTGGTGCCGCGCTCAGCTGAACAAAGGAAAGGGTGTATCGTGATTGGAGGAAAGAGGTAGAGAGATTTTTTCCTGAAGGAAAATCTGTTTCAACTGATGAATTCTTAGAACGACTTTAAGCAGACTGCGTTAATTGATTATCAAGAGCTGTCGGTGTTTTGGGTCTTGAAGAGTTGTCGCAAAGTTTGCTGGTGAAACCTGTTACTGTCATAGGAAATCAACTCTTCTACCAAAACTACGCTAGGGGGACAAGGCGTCCACACACAGTGCCATGGGGCCAAAGTGTTGCAAAGTGTTGTAGTGGCTACCGCCAGTTAATGTAATCTCGCTGTCAAGTGTGCGCTTTCTTGTAGTTGTTATAAAATGACACAGGAGGACGTGATTAGCAATCGTCAGAGAATAAATTTATTTCATAGAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8AY73	Exportin-2 OS=Oreochromis niloticus OX=8128 GN=cse1l PE=2 SV=1
A5D785	Exportin-2 OS=Bos taurus OX=9913 GN=CSE1L PE=2 SV=1
P55060	Exportin-2 OS=Homo sapiens OX=9606 GN=CSE1L PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004691 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03810 all species →	IBN_N	Importin-beta N-terminal domain	Repeat	Interproscan
PF03378 all species →	CAS_CSE1	CAS/CSE protein, C-terminus	Repeat	Interproscan
PF08506 all species →	Cse1	Cse1	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR001494 all species →	Domain	Importin-beta, N-terminal domain	Interproscan
IPR005043 all species →	Domain	Exportin-2, C-terminal	Interproscan
IPR013713 all species →	Domain	Exportin-2, central domain	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10997 all species →	IMPORTIN-7, 8, 11	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0005049 all species →	Molecular Function	nuclear export signal receptor activity	Interproscan
GO:0005635 all species →	Cellular Component	nuclear envelope	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006606 all species →	Biological Process	protein import into nucleus	Interproscan
GO:0006611 all species →	Biological Process	protein export from nucleus	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18423	CSE1, CAS, XPO2; exportin-2 (importin alpha re-exporter)	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_001633360.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

41TPM > 0

16Conditions

23.0Max TPM

10.5Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	16.24	20.45
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	10.87	13.64
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	8.82	9.15
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	8.44	8.56
whole 6 week old aboral regenerate · regenerate uncut	3	3	7.37	8.04
whole 6 week old aboral regenerate · regenerate 4hpa	3	1	2.67	8.01
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	13.68	15.69
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	18.01	22.99
whole 6 week old aboral regenerate · regenerate 24hpa	3	3	10.33	12.51
whole 6 week old aboral regenerate · regenerate 20hpa	3	2	7.26	11.02
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	8.13	9.34
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	16.18	16.97
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	17.65	19.06
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	12.94	20.51
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	5.86	9.09
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	2.88	8.63

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	20.45
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	16.62
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	11.64
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	13.64
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	9.75
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	9.23
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	9.15
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	9.14
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	8.17
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	8.56
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	8.38
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	8.37
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	8.04
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	7.21
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	6.87
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	8.01
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	15.69
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	14.05
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	11.31
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	22.99
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	16.86
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	14.17
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	12.51
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	9.77
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	8.71
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	11.02
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	10.77
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.00
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	9.34
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	7.63
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	7.41
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	16.97
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	16.01
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	15.57
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	19.06
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	18.60
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	15.28
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	20.51
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	18.31
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	9.09
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	8.50
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	8.63
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.