Gene detail

Detailed information of XP_001633987.2 in Nematostella vectensis

Genomic Location: NC_064037.1:10058997...10081834
NR annotation: XP_001633987.2, pre-mRNA-processing-splicing factor 8 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5513721

ATGGCGGCCTACGGACACCAATCCATGTCACTCATGGAGGAAAAGTTGCAGGAAAAAGCTCGCAAATGGCAGCAACTGCAGTCCAAACGCTATAGCGAGAAGCGAAAGTTTGGGTTTGTGGAGGCACAAAAGGAAGACATGCCTCCAGAGCATGTTAGAAAGATCATCAGAGACCATGGTGACATGACTAGCCGCAAGTACCGCCACGACAAGAGGGTGTACCTGGGGGCCTTAAAGTATATGCCGCATGCTGTGCTCAAGCTACTAGAGAACATGCCAATGCCATGGGAGCAGATCCGTGATGTCAAAGTTCTCTACCATATCACTGGAGCAATCACCTTTGTCAATGAGATTCCATGGGTAGTTGAGCCAGTGTATATGGCACAATGGGGAACAATGTGGATTATGATGAGGCGCGAGAAAAGAGATCGCCGTCACTTCAAGCGCATGCGCTTCCCTCCCTTTGATGACGAGGAGCCCCCACTAGATTATGCAGATAATATTCTGGATGTAGAGCCTCTGGAGCCAATACAGATAGAGCTGGATGATGAGGAGGATGGGCCTGTGTGTGAATGGTTCTATGAGCACAAGGCGCTAACTGACACTCCGTTTGTCAATGGTACATCCTACAGACGATGGCACTTCTCTCTACCCGTCATGGCCACGCTCTATCGGCTTGGCAATCAGCTCCTGACAGACCTTGTTGATGACAACTACTTCTACCTCTTTGACCTCAAGGCCTTTTTCACAGCCAAGGCACTGAATGTCTGCATTCCTGGAGGCCCAAAGTTTGAGCCCCTGGTCCGGGACGTCAGCACTCAGGATGAAGATTGGAATGAATTCAATGACATCAACAAGATCATTATCCGCCAGCCAGTCCGGACAGAGTACAGAATTGCCTTTCCTTATCTTTACAACAGTTTGCCGTACAAAGTACACCTACCCTGGTATCATTACCCCTCTGTGGTTTACATCAAGACTGAGGACCCAGATCTCCCCGCATTCTACTTTGATCCATTGATTAACCCTATCTCCCACAGACATGCTGTCAAGTCGGCAGAGCCTCTCCCTCTCGAGGATGACGCCTTTGAGTTACCTGAGGAAATCCAACCATTCCTTCAGGATAGGCCTCTATACACCGATAACACAGCCAATGGCATCGCACTGCTCTGGGGACCACGCCCATTCAACATCAGGTCTGGGCGCACCCGGCGTGCTTTGGACATTCCACTTGTTAAATCATGGTACAGAGAACACTGCCCTTCTGGGCACCCAGTGAAGGTCCGGGTATCTTACCAGAAGCTCCTCAAGTGTTATGTCTTGAATGCTCTCAAGCACAGACCACCAAAAGCACAGAAGAAACGCTACCTCTTCAGATCCTTCAAATCAACCAAGTTCTTCCAGTCAACAACCCTAGACTGGGTAGAGGCGGGACTTCAGGTCTGCCGCCAGGGCTACAACATGCTCAATTTGTTAATCCATCGTAAAAATCTGAACTATCTTCATTTGGACTACAACTTCAATCTGAAGCCTGTCAAGACGCTGACTACTAAGGAGCGTAAGAAGTCTAGGTTCGGTAATGCCTTCCACTTGTGCCGTGAGATCCTCAGGTTGACCAAGTTGATTGTGGACTCCCATGTGCAGTACAGATTGGGAAATGTAGATGCCTTCCAGTTGGCAGATGGTTTGCAATACATTTTTGCGCATGTTGGTCAGCTGACAGGAATGTACAGATACAAGTACAAGCTGATGAGACAGATCAGGATGTGCAAGGACCTTAAGCATCTCATCTACTACAGATTCAACACTGGTGCAGTTGGGAAGGGTCCCGGGTGTGGTTTCTGGGCACCGGGCTGGAGGGTTTGGCTATTCTTCCTTCGTGGGATTGTTCCCCTGCTTGAGCGCTGGCTTGGTAACCTGCTAGCTCGTCAGTTTGAGGGCCGTCATTCCAAAGGCGTGGCTAAGACAGTCACAAAGCAGCGTGTGGAGAGTCACTATGACCTTGAGCTGCGTGCGGCTGTGATGCACGATATCTTGGACATGATGCCAGAGGGGATAAAGCAGAACAAAGCCCGAACTATTCTACAGCATCTGAGTGAGGCCTGGAGGTGCTGGAAGGCCAACATTCCCTGGAAGGTACCCGGCCTCCCGACCCCTGTCGAGAACATGATCCTGCGCTACGTGAAGGCAAAGGCCGACTGGTGGACCAACACTGCACATTACAACAGGGAGCGTATTCGTCGAGGTGCTACTGTCGACAAGACAGTGTGTAAGAAGAACCTGGGACGTCTCACACGTCTCTATCTAAAGGCAGAGCAAGAGAGGCAACACAACTATCTAAAGGATGGTCCGTATATCTCGGCAGAAGAGGCCGTAGCTATCTACACAACCACCGTCCACTGGCTTGAGAGCCGTCGCTTCTCGCCAATCCCCTTCCCCCCTCTCTCTTACAAGCATGATACCAAGCTACTGATCCTTGCCCTTGAAAGGCTAAAGGAGGCATACAGCGTCAAGAGTCGACTGAACCAGTCGCAGCGTGAGGAGCTTGGACTGATTGAACAAGCTTATGATAACCCTCATGAGGCTCTCAGTAGAATCAAGCGTCACTTGCTCACCCAGAGAGCATTTAAGGAGGTTGGTATTGAGTTCATGGACTTGTACAGCCACCTTATTCCTGTGTACGACGTGGAGCCTCTAGAGAAGATCACTGATGCCTACCTTGATCAGTACTTATGGTACGAGGCTGACAAACGGCGCCTCTTCCCACCATGGATCAAGCCTGCGGACACAGAGCCTCCGCCCCTGCTTGTATACAAGTGGTGCCAAGGCATCAACAACTTGCAGGATGTGTGGGAGACTGCAGAAGGAGAGTGTAACGTGATGATGGAGAGCAAGTTTGAGAAACTATACGAGAAGATTGACTTGACTCTACTTAACAGACTGTTGAGACTCATTGTGGATCACAACATTGCTGATTACATGACTGCCAAGAACAATGTTGTCATAAACTACAAGGATATGAACCACACAAACTCCTACGGAATCATCCGTGGCTTGCAGTTTGCTTCATTCGTTGTCCAGTACTACGGCCTGGTGCTTGACTTGCTCGTGCTTGGCCTTCAGCGTGCAAGTGAGATGGCAGGACCACCACAGGTACCCAACGACTTCTTGACCTTTCAGGATGTGGAGACAGAGGGGCGGCATCCTATCAGGCTCTACTCCAGATACATCGACAGGATCCACATCTTTTTCAGGTTCTCTGCCGAGGATGCACGAGACCTGATCCAGCGCTACCTGACAGAGCACCCTGACCCCAACAATGAAAACATCGTGGGCTACAACAACAAGAAATGCTGGCCACGTGACGCACGCATGCGGCTAATGAAGCATGACGTCAACCTGGGTCGTGCTGTATTCTGGGATATCAAGAACCGGCTGCCTCGCTCCATTAGCACATTGCAGTGGGAAAATAGTTTTGTGTCTGTGTACAGCAAGGATAACCCCAACTTGTTATTCAACATGTGTGGCTTTGAGAGCAGGATTCTGCCCAAGTGTCGGACAACCTTTGAGGAGTTCACTCACAGAGATGGTGTGTGGAACCTCCAGAATGAGGTGACGAAAGAGCGAACAGCGCAGTGCTTCCTTCGTGTAGATGACGAGTCCCAATCACGCTTCCATAACCGCGTCCGTCAGATTCTTATGGCGTCTGGCTCCACCACCTTCACCAAGATTGTGAACAAGTGGAACACGGCACTCATTGGGCTCACTACTTATTTCAGAGAAGCTGTGGTCAACACCCAGGAGTTACTGGACTTGCTGGTCAAGTGTGAGAATAAGATCCAAACTCGTATCAAGATTGGTCTTAACTCCAAGATGCCTAGCCGTTTCCCACCTGTGGTGTTCTACACGCCTAAAGAGCTTGGTGGACTTGGCATGCTCTCAATGGGCCACGTGCTCATACCACAGTCTGATCTAAGGTGGTCGCAACAGACAGATGCTGGGATTACTCACTTCCGGTCTGGAATGAGCCATGACGAGGACCAGCTTATTCCAAATTTGTACAGGTACATCCAACCATGGGAGTCAGAGTTCATTGATTCCCAGCGTGTTTGGGCTGAGTATGCTCTGAAAAGACAGGAGGCAAATGCACAGAACAGACGCTTGACGCTAGAAGACTTGGAGGACTCATGGGACCGGGGGATCCCCCGGATCAACACGCTCTTCCAGAAGGATAGACACACGCTTGCCTATGACAAAGGATGGCGTGTTAGAACTGACTTCAAACAGTATCAAGTTCTCAAGCAGAATCCGTTCTGGTGGACACACCAGCGTCATGATGGCAAGTTATGGAACCTGAACAACTACCGCACAGACATGATCCAGGCCCTAGGTGGGGTCGAAGGCATCCTGGAGCACACCCTTTTCAAGGGTACCTACTTCCCTACCTGGGAAGGTCTTTTCTGGGAGAAAGCCAGTGGTTTTGAGGAGAGCATGAAGTACAAGAAACTAACAAACGCGCAGAGGTCTGGATTGAACCAGATCCCTAACAGAAGGTTCACGTTGTGGTGGTCGCCTACCATCAACAGGGCTAATGTTTATGTGGGTTTCCAGGTGCAGCTCGACCTCACTGGTATCTTCATGCACGGCAAGATCCCCACCCTCAAGATCTCACTGATTCAGATCTTCCGAGCCCATCTGTGGCAAAAGGTGCATGAGAGCGTCGTCATGGACTTGTGTCAGGTATTTGATCAGGAGCTTGATGCCCTGGAGATTGAGACAGTGCAAAAGGAGACAATTCACCCGCGTAAATCATACAAGATGAACAGCTCCTGTGCTGATATCCTGCTCTTCGCTGCGTACAAGTGGAACATCTTCAAGCCATCGCTACTTGCCGACACAAACGACACAATGGACGGCACAGTGACGCAGAAGTACTGGGTTGATGTGCAGCTGCGATGGGGTGACTACGACTCGCACGACATCGAGAGATACGCTCGCGCCAAGTTCCTTGACTACACCACGGACAACATGAGTATCTACCCCTCCCCCACGGGGCTGCTTGTTGCCATTGACCTCGCCTACAATCTGCACAGTGCATTTGGTAACTGGTTCCCTGGCATCAAACCCCTGATCCAGCAGGCTATGGCAAAGATAATGAAGGCCAACCCTGCGCTCTATGTGCTTAGGGAGCGTATTCGTAAAGCGCTTCAGCTGTACTCCAGTGAGCCCACTGAGCCATACTTGTCCTCGCAGAACTACGGAGAGCTCTTCTCAAACCAGATCATCTGGTTTGTGGACGACACAAATGTCTACAGGGTTACAATTCACAAGACGTTCGAAGGTAACTTGACGACAAAGCCTATCAACGGCGCGATCTTCATCTTCAACCCTCGCACAGGGCAGCTCTTCCTTAAGATCATCCACACTTCCGTGTGGGCCGGACAGAAACGTCTCGGACAGTTGGCCAAGTGGAAGACTGCTGAGGAAGTGGCAGCATTGATTCGATCGCTTCCGGTGGAAGAGCAGCCCAAGCAAATCATCGTCACGCGCAAAGGCATGTTGGACCCCCTAGAGGTCCATTTGCTCGATTTCCCCAACATCGTCATCAAGGGTAGTGAGCTACAGCTACCATTCCAAGCTTGTCTCAAGGTGGAGAAGCTGGGTGACATGATCCTGAAGGCCACGGAGCCCCAAATGGTGTTGTTCAACCTCTATGATGACTGGCTGAAGACCATCTCTTCCTACACTGCCTTCTCTCGTCTCATCCTCATCCTCCGCGCCTTGCACGTCAATGCGGATAGAACCAAGGTGATCCTCAAGCCAGACAAGACGATCATCACAGAGCCGCATCACATCTGGCCTTCACTCAGTGATGAAGAGTGGGTCACAGTGGAGGTGCAGCTTAAGGATCTAATCCTCGCGGACTACGGCAAGAAGAACAACGTCAACGTGGCGTCCCTGACTCAGTCCGAGATCCGAGACATCATCCTGGGAATGGAAATTAGCGCACCCTCTCAGCAGCGTCAGCAGATTGCGGAGATCGAGAAACAGACCAAGGAACAGTCACAGCTGACGGCCACCACCACACGTACCACGAACATACACGGAGACGAGATCATCGTGTCAACTACAAGTAACTACGAGACACAGACCTTCTCGTCCAAGACGGAGTGGCGTGTACGTGCCATCTCGGCCACCAACCTCCATCTTCGCACCAATCACATCTACGTGTCTTCAGACGACATCAAGGAGACAGGCTTCACTTACATCCTGCCCAAGAACGTGCTCAAGAAGTTCATCGTCATCTCCGATCTACGCACCCAGATCTCAGGATACCTGTATGGAGTCAGCCCACCCGACAACCCTCAAGTGAAGGAGATCCGCTGCATTGTCATGGTGCCGCAATGGGGAACTCACCAGACCGTTCACCTTCCCAACATGTTACCCCAACACGACTACCTCAAGGAAATGGAGCCTTTAGGCTGGATTCACACGCAGCCCAACGAGTTGCCTCAACTGGCGCCACAAGACGTGACCACACACGCCAAGATCATGGCGGACAACCCGTCATGGGACGGCGAGAAAACTGTCATCATCACGTGCAGTTTCACACCCGGATCATGCTCGCTCACCGCCTACAAGCTCACTCCTTCTGGATACGACTGGGGGCGTAACAACAAGGACACGGGCAACAACCCTCGCGGGTACCTACCCTCGCACTACGAGCGCGTCCAGATGCTGTTATCAGATCGCTTCTTGGGATTCTTCATGGTTCCGGCACAGGGTTCTTGGAACTATAATTTCATGGGCGTGCGACACTCCGCTAACATGCGGTACGAATTGCAACTATCGAACCCAAAGGACTTCTATCACGAGGTCCATCGGCCCTCGCACTTCCTTAATTTCAGCACCATGGAGGACAGCGAGCTGATCGGCGCAGACAGAGAGGACATGTTTGGTTAA

Transcript

rna-XM_001633937.3

CCCTCGCTCTAGTTCAAAGAGAGAGACTGGGTTCTAATAGGTTTGAAGGCACGCTTTCGTCGAAGTTACGTTCTCTTTTAGAATTGTTTTGAGTTAACGGCGAAATCAAGGCTTAAATCGCCAAacATAGTTCTAAATCTTGGTTTCcgccaaaatggcggcctacGGACACCAATCCATGTCACTCATGGAGGAAAAGTTGCAGGAAAAAGcTCGCAAATGGCAGCAACTGCAGTCCAAACGCTATAGCGAGAAGCGAAAGTTTGGGTTTGTGGAGGCACAAAAGGAAGACATGCCTCCAGAGCATGTTAGAAAGATCATCAGAGACCATGGTGACATGACTAGCCGCAAGTACCGCCACGACAAGAGGGTGTACCTGGGGGCCTTAAAGTATATGCCGCATGCTGTGCTCAAGCTACTAGAGAACATGCCAATGCCATGGGAGCAGATCCGTGATGTCAAAGTTCTCTACCATATCACTGGAGCAATCACCTTTGTCAATGAGATTCCATGGGTAGTTGAGCCAGTGTATATGGCACAATGGGGAACAATGTGGATTATGATGAGGCGCGAGAAAAGAGATCGCCGTCACTTCAAGCGCATGCGCTTCCCTCCCTTTGATGACGAGGAGCCCCCACTAGATTATGCAGATAATATTCTGGATGTAGAGCCTCTGGAGCCAATACAGATAGAGCTGGATGATGAGGAGGATGGGCCTGTGTGTGAATGGTTCTATGAGCACAAGGCGCTAACTGACACTCCgTTTGTCAATGGTACATCCTACAGACGATGGCACTTCTCTCTACCCGTCATGGCCACGCTCTATCGGCTTGGCAATCAGCTCCTGACAGACCTTGTTGATGACAACTACTTCTACCTCTTTGACCTCAAGGCCTTTTTCACAGCCAAGGCACTGAATGTCTGCATTCCTGGAGGCCCAAAGTTTGAGCCCCTGGTCCGGGACGTCAGCACTCAGGATGAAGATTGGAATGAATTCAATGACATCAACAAGATCATTATCCGCCAGCCAGTCCGGACAGAGTACAGAATTGCCTTTCCTTATCTTTACAACAGTTTGCCGTACAAAGTACACCTACCCTGGTATCATTACCCCTCTGTGGTTTACATCAAGACTGAGGACCCAGATCTCCCCGCATTCTACTTTGATCCATTGATTAACCCTATCTCCCACAGACATGCTGTCAAGTCGGCAGAGCCTCTCCCTCTCGAGGATGACGCCTTTGAGTTACCTGAGGAAATCCAACCATTCCTTCAGGATAGGCCTCTATACACCGATAACACAGCCAATGGCATCGCACTGCTCTGGGGACCACGCCCATTCAACATCAGGTCTGGGCGCACCCGGCGTGCTTTGGACATTCCACTTGTTAAATCATGGTACAGAGAACACTGCCCTTCTGGGCACCCAGTGAAGGTCCGGGTATCTTACCAGAAGCTCCTCAAGTGTTATGTCTTGAATGCTCTCAAGCACAGACCACCAAAAGCACAGAAGAAACGCTACCTCTTCAGATCCTTCAAATCAACCAAGTTCTTCCAGTCAACAACCCTAGACTGGGTAGAGGCGGGACTTCAGGTCTGCCGCCAGGGCTACAACATGCTCAATTTGTTAATCCATCGTAAAAATCTGAACTATCTTCATTTGGACTACAACTTCAATCTGAAGCCTGTCAAGACGCTGACTACTAAGGAGCGTAAGAAGTCTAGGTTCGGTAATGCCTTCCACTTGTGCCGTGAGATCCTCAGGTTGACCAAGTTGATTGTGGACTCCCATGTGCAGTACAGATTGGGAAATGTAGATGCCTTCCAGttggCAGATggtttgcaatacatttttgcGCATGTTGGTCAGCTGACAGGAATGTACAGATACAAGTACAAGCTGATGAGACAGATCAGGATGTGCAAGGACCTTAAGCATCTCATCTACTACAGATTCAACACTGGTGCAGTTGGGAAGGGTCCCGGGTGTGGTTTCTGGGCACCGGGCTGGAGGGTTTGGCTATTCTTCCTTCGTGGGATTGTTCCCCTGCTTGAGCGCTGGCTTGGTAACCTGCTAGCTCGTCAGTTTGAGGGCCGTCATTCCAAAGGCGTGGCTAAGACAGTCACAAAGCAGCGTGTGGAGAGTCACTATGACCTTGAGCTGCGTGCGGCTGTGATGCACGATATCTTGGACATGATGCCAGAGGGGATAAAGCAGAACAAAGCCCGAACTATTCTACAGCATCTGAGTGAGGCCTGGAGGTGCTGGAAGGCCAACATTCCCTGGAAGGTACCCGGCCTCCCGACCCCTGTCGAGAACATGATCCTGCGCTACGTGAAGGCAAAGGCCGACTGGTGGACCAACACTGCACATTACAACAGGGAGCGTATTCGTCGAGGTGCTACTGTCGACAAGACAGTGTGTAAGAAGAACCTGGGACGTCTCACACGTCTCTATCTAAAGGCAGAGCAAGAGAGGCAACACAACTATCTAAAGGATGGTCCGTATATCTCGGCAGAAGAGGCCGTAGCTATCTACACAACCACCGTCCACTGGCTTGAGAGCCGTCGCTTCTCGCCaatccccttcccccctctcTCTTACAAGCATGATACCAAGCTACTGATCCTTGCCCTTGAAAGGCTAAAGGAGGCATACAGCGTCAAGAGTCGACTGAACCAGTCGCAGCGTGAGGAGCTTGGACTGATTGAACAAGCTTATGATAACCCTCATGAGGCTCTCAGTAGAATCAAGCGTCACTTGCTCACCCAGAGAGCATTTAAGGAGGTTGGTATTGAGTTCATGGACTTGTACAGCCACCTTATTCCTGTGTACGACGTGGAGCCTCTAGAGAAGATCACTGATGCCTACCTTGATCAGTACTTATGGTACGAGGCTGACAAACGGCGCCTCTTCCCACCATGGATCAAGCCTGCGGACACAGAGCCTCCGCCCCTGCTTGTATACAAGTGGTGCCAAGGCATCAACAACTTGCAGGATGTGTGGGAGACTGCAGAAGGAGAGTGTAACGTGATGATGGAGAGCAAGTTTGAGAAACTATACGAGAAGATTGACTTGACTCTACTTAACAGACTGTTGAGACTCATTGTGGATCACAACATTGCTGATTACATGACTGCCAAGAACAATGTTGTCATAAACTACAAGGATATGAACCACACAAACTCCTACGGAATCATCCGTGGCTTGCAGTTTGCTTCATTCGTTGTCCAGTACTACGGCCTGGTGCTTGACTTGCTCGTGCTTGGCCTTCAGCGTGCAAGTGAGATGGCAGGACCACCACAGGTACCCAACGACTTCTTGACCTTTCAGGATGTGGAGACAGAGGGGCGGCATCCTATCAGGCTCTACTCCAGATACATCGACAGGATCCACATCTTTTTCAGGTTCTCTGCCGAGGATGCACGAGACCTGATCCAGCGCTACCTGACAGAGCACCCTGACCCCAACAATGAAAAcatcgtgggctacaacaacaAGAAATGCTGGCCACGTGACGCACGCATGCGGCTAATGAAGCATGACGTCAACCTGGGTCGTGCTGTATTCTGGGATATCAAGAACCGGCTGCCTCGCTCCATTAGCACATTGCAGTGGGAAAATAGTTTTGTGTCTGTGTACAGCAAGGATAACCCCAACTTGTTATTCAACATGTGTGGCTTTGAGAGCAGGATTCTGCCCAAGTGTCGGACAACCTTTGAGGAGTTCACTCACAGAGATGGTGTGTGGAACCTCCAGAATGAGGTGACGAAAGAGCGAACAGCGCAGTGCTTCCTTCGTGTAGATGACGAGTCCCAATCACGCTTCCATAACCGCGTCCGTCAGATTCTTATGGCGTCTGGCTCCACCACCTTCACCAAGATTGTGAACAAGTGGAACACGGCACTCATTGGGCTCACTACTTATTTCAGAGAAGCTGTGGTCAACACCCAGGAGTTACTGGACTTGCTGGTCAAGTGTGAGAATAAGATCCAAACTCGTATCAAGATTGGTCTTAACTCCAAGATGCCTAGCCGTTTCCCACCTGTGGTGTTCTACACGCCTAAAGAGCTTGGTGGACTTGGCATGCTCTCAATGGGCCACGTGCTCATACCACAGTCTGATCTAAGGTGGTCGCAACAGACAGATGCTGGGATTACTCACTTCCGGTCTGGAATGAGCCATGACGAGGACCAGCTTATTCCAAATTTGTACAGGTACATCCAACCATGGGAGTCAGAGTTCATTGATTCCCAGCGTGTTTGGGCTGAGTATGCTCTGAAAAGACAGGAGGCAAATGCACAGAACAGACGCTTGACGCTAGAAGACTTGGAGGACTCATGGGACCGGGGGATCCCCCGGATCAACACGCTCTTCCAGAAGGATAGACACACGCTTGCCTATGACAAAGGATGGCGTGTTAGAACTGACTTCAAACAGTATCAAGTTCTCAAGCAGAATCCGTTCTGGTGGACACACCAGCGTCATGATGGCAAGTTATGGAACCTGAACAACTACCGCACAGACATGATCCAGGCCCTAGGTGGGGTCGAAGGCATCCTGGAGCACACCCTTTTCAAGGGTACCTACTTCCCTACCTGGGAAGGTCTTTTCTGGGAGAAAGCCAGTGGTTTTGAGGAGAGCATGAAGTACAAGAAACTAACAAACGCGCAGAGGTCTGGATTGAACCAGATCCCTAACAGAAGGTTCACGTTGTGGTGGTCGCCTACCATCAACAGGGCTAATGTTTATGTGGGTTTCCAGGTGCAGCTCGACCTCACTGGTATCTTCATGCACGGCAAGATCCCCACCCTCAAGATCTCACTGATTCAGATCTTCCGAGCCCATCTGTGGCAAAAGGTGCATGAGAGCGTCGTCATGGACTTGTGTCAGGTATTTGATCAGGAGCTTGATGCCCTGGAGATTGAGACAGTGCAAAAGGAGACAATTCACCCGCGTAAATCATACAAGATGAACAGCTCCTGTGCTGATATCCTGCTCTTCGCTGCGTACAAGTGGAACATCTTCAAGCCATCGCTACTTGCCGACACAAACGACACAATGGACGGCACAGTGACGCAGAAGTACTGGGTTGATGTGCAGCTGCGATGGGGTGACTACGACTCGCACGACATCGAGAGATACGCTCGCGCCAAGTTCCTTGACTACACCACGGACAACATGAGtatctacccctcccccacgggGCTGCTTGTTGCCATTGACCTCGCCTACAATCTGCACAGTGCATTTGGTAACTGGTTCCCTGGCATCAAACCCCTGATCCAGCAGGCTATGGCAAAGATAATGAAGGCCAACCCTGCGCTCTATGTGCTTAGGGAGCGTATTCGTAAAGCGCTTCAGCTGTACTCCAGTGAGCCCACTGAGCCATACTTGTCCTCGCAGAACTACGGAGAGCTCTTCTCAAACCAGATCATCTGGTTTGTGGACGACACAAATGTCTACAGGGTTACAATTCACAAGACGTTCGAAGGTAACTTGACGACAAAGCCTATCAACGGCGCGATCTTCATCTTCAACCCTCGCACAGGGCAGCTCTTCCTTAAGATCATCCACACTTCCGTGTGGGCCGGACAGAAACGTCTCGGACAGTTGGCCAAGTGGAAGACTGCTGAGGAAGTGGCAGCATTGATTCGATCGCTTCCGGTGGAAGAGCAGCCCAAGCAAATCATCGTCACGCGCAAAGGCATGTTGGACCCCCTAGAGGTCCATTTGCTCGATTTCCCCAACATCGTCATCAAGGGTAGTGAGCTACAGCTACCATTCCAAGCTTGTCTCAAGGTGGAGAAGCTGGGTGACATGATCCTGAAGGCCACGGAGCCCCAAATGGTGTTGTTCAACCTCTATGATGACTGGCTGAAGACCATCTCTTCCTACACTGCCTTCTCTCGTCTCATCCTCATCCTCCGCGCCTTGCACGTCAATGCGGATAGAACCAAGGTGATCCTCAAGCCAGACAAGACGATCATCACAGAGCCGCATCACATCTGGCCTTCACTCAGTGATGAAGAGTGGGTCACAGTGGAGGTGCAGCTTAAGGATCTAATCCTCGCGGACTACGGCAAGAAGAACAACGTCAACGTGGCGTCCCTGACTCAGTCCGAGATCCGAGACATCATCCTGGGAATGGAAATTAGCGCACCCTCTCAGCAGCGTCAGCAGATTGCGGAGATCGAGAAACAGACCAAGGAACAGTCACAGCTGACGGCCACCACCACACGTACCACGAACATACACGGAGACGAGATCATCGTGTCAACTACAAGTAACTACGAGACACAGACCTTCTCGTCCAAGACGGAGTGGCGTGTACGTGCCATCTCGGCCACCAACCTCCATCTTCGCACCAATCACATCTACGTGTCTTCAGACGACATCAAGGAGACAGGCTTCACTTACATCCTGCCCAAGAACGTGCTCAAGAAGTTCATCGTCATCTCCGATCTACGCACCCAGATCTCAGGATACCTGTATGGAGTCAGCCCACCCGACAACCCTCAAGTGAAGGAGATCCGCTGCATTGTCATGGTGCCGCAATGGGGAACTCACCAGACCGTTCACCTTCCCAACATGTTACCCCAACACGACTACCTCAAGGAAATGGAGCCTTTAGGCTGGATTCACACGCAGCCCAACGAGTTGCCTCAACTGGCGCCACAAGACGTGACCACACACGCCAAGATCATGGCGGACAACCCGTCATGGGACGGCGAGAAAACTGTCATCATCACGTGCAGTTTCACACCCGGATCATGCTCGCTCACCGCCTACAAGCTCACTCCTTCTGGATACGACTGGGGGCGTAACAACAAGGACACGGGCAACAACCCTCGCGGGTACCTACCCTCGCACTACGAGCGCGTCCAGATGCTGTTATCAGATCGCTTCTTGGGATTCTTCATGGTTCCGGCACAGGGTTCTTGGAACTATAATTTCATGGGCGTGCGACACTCCGCTAACATGCGGTACGAATTGCAACTATCGAACCCAAAGGACTTCTATCACGAGGTCCATCGGCCCTCGCACTTCCTTAATTTCAGCACCATGGAGGACAGCGAGCTGATCGGCGCAGACAGAGAGGACATGTTTGGTTAAGAAAGACAGAAAGGGGATGTATGGTTAGAGAGAACAGAAATGACATGTTTGGTTAAGAAGAACAGAAAGGGGATGTACGGTTAGGCAGAACAGAGAGGGCATGTTTGGTTAAGAAAGACAGAAAGGGGATGTATGGTTAGGAAGAACATAGAGGACAAAGACAGAAATACAAAGACAGAAATAAAGAAAGGGGATGTATGGTTAGACAGAACAGAGAGGACATGTTTGGTTAGGGTTTGGTTATTGGTACCCTGGCTTGCTCGTTATTAGACCCCGACTGTTGTGACTGGGTATCTCTTGTGAATATAAGTGGAATCCAGGCAACGCTTCTACACATATAAATCGCACACAGCTCAGTGTAGAGAGATTCAAgtgaaaatacgttgtttttgacttcatatttttttagggcacatttttttgcaCTAGGAAAGTTGTGATACTCACCACTCTTCAATAGTAAGCCTGAATAATAGTGTCCTAATGGAACAGCTATGTGGCTGTGTTTCTTGCTTTGTTCTAGCATGTGATCCAGTCAACATAGCTTTTTAGAATAGGCAATAGCCAACAACTGTTGGAGAGTctaagttatttttttgtacagattacgaacaatctaagcttaATGTCTGCCTAACTAAGTAATCTAAAGAAACTTTACTTGTAATATCCAGTTGTGCCGAAGTTTCTATTAAATGTTTTTCTGAACAAAA

Protein

XP_001633987.2

MAAYGHQSMSLMEEKLQEKARKWQQLQSKRYSEKRKFGFVEAQKEDMPPEHVRKIIRDHGDMTSRKYRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVVEPVYMAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEPIQIELDDEEDGPVCEWFYEHKALTDTPFVNGTSYRRWHFSLPVMATLYRLGNQLLTDLVDDNYFYLFDLKAFFTAKALNVCIPGGPKFEPLVRDVSTQDEDWNEFNDINKIIIRQPVRTEYRIAFPYLYNSLPYKVHLPWYHYPSVVYIKTEDPDLPAFYFDPLINPISHRHAVKSAEPLPLEDDAFELPEEIQPFLQDRPLYTDNTANGIALLWGPRPFNIRSGRTRRALDIPLVKSWYREHCPSGHPVKVRVSYQKLLKCYVLNALKHRPPKAQKKRYLFRSFKSTKFFQSTTLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGAVGKGPGCGFWAPGWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHYDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPVENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGINNLQDVWETAEGECNVMMESKFEKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFVVQYYGLVLDLLVLGLQRASEMAGPPQVPNDFLTFQDVETEGRHPIRLYSRYIDRIHIFFRFSAEDARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSISTLQWENSFVSVYSKDNPNLLFNMCGFESRILPKCRTTFEEFTHRDGVWNLQNEVTKERTAQCFLRVDDESQSRFHNRVRQILMASGSTTFTKIVNKWNTALIGLTTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSQQTDAGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHESVVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAYKWNIFKPSLLADTNDTMDGTVTQKYWVDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLVAIDLAYNLHSAFGNWFPGIKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKLGDMILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNADRTKVILKPDKTIITEPHHIWPSLSDEEWVTVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLTATTTRTTNIHGDEIIVSTTSNYETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGFTYILPKNVLKKFIVISDLRTQISGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPNMLPQHDYLKEMEPLGWIHTQPNELPQLAPQDVTTHAKIMADNPSWDGEKTVIITCSFTPGSCSLTAYKLTPSGYDWGRNNKDTGNNPRGYLPSHYERVQMLLSDRFLGFFMVPAQGSWNYNFMGVRHSANMRYELQLSNPKDFYHEVHRPSHFLNFSTMEDSELIGADREDMFG

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6P2Q9	Pre-mRNA-processing-splicing factor 8 OS=Homo sapiens OX=9606 GN=PRPF8 PE=1 SV=2
Q99PV0	Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2
P34369	Pre-mRNA-splicing factor 8 homolog OS=Caenorhabditis elegans OX=6239 GN=prp-8 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004368 (this species only) · gene tree & orthology
Ubiquitin family	UBD\|Other\|Jab_MPN · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08083 all species →	PROCN	PROCN (NUC071) domain	Domain	Interproscan
PF08082 all species →	PRO8NT	PRO8NT (NUC069), PrP8 N-terminal domain	Domain	Interproscan
PF10596 all species →	U6-snRNA_bdg	U6-snRNA interacting domain of PrP8	Domain	Interproscan
PF08084 all species →	PROCT	PROCT (NUC072) domain	Domain	Interproscan
PF12134 all species →	PRP8_domainIV	PRP8 domain IV core	Domain	Interproscan
PF01398 all species →	JAB	JAB1/Mov34/MPN/PAD-1 ubiquitin protease	Family	Interproscan
PF10597 all species →	U5_2-snRNA_bdg	U5-snRNA binding site 2 of PrP8	Domain	Interproscan
PF10598 all species →	RRM_4	RNA recognition motif of the spliceosomal PrP8	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR012592 all species →	Domain	PROCN domain	Interproscan
IPR043172 all species →	Homologous_superfamily	Prp8 RNase domain IV, palm region	Interproscan
IPR021983 all species →	Domain	PRP8 domain IV core	Interproscan
IPR043173 all species →	Homologous_superfamily	Prp8 RNase domain IV, fingers region	Interproscan
IPR012591 all species →	Domain	PRO8NT domain	Interproscan
IPR019580 all species →	Domain	Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding	Interproscan
IPR042516 all species →	Homologous_superfamily	Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding domain superfamily	Interproscan
IPR027652 all species →	Family	Pre-mRNA-processing-splicing factor 8	Interproscan
IPR012984 all species →	Domain	PROCT domain	Interproscan
IPR000555 all species →	Domain	JAB1/MPN/MOV34 metalloenzyme domain	Interproscan
IPR019581 all species →	Domain	Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding	Interproscan
IPR019582 all species →	Domain	RNA recognition motif, spliceosomal PrP8	Interproscan
IPR037518 all species →	Domain	MPN domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11140 all species →	PRE-MRNA SPLICING FACTOR PRP8	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000398 all species →	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0017070 all species →	Molecular Function	U6 snRNA binding	Interproscan
GO:0000244 all species →	Biological Process	spliceosomal tri-snRNP complex assembly	Interproscan
GO:0005681 all species →	Cellular Component	spliceosomal complex	Interproscan
GO:0005682 all species →	Cellular Component	U5 snRNP	Interproscan
GO:0030619 all species →	Molecular Function	U1 snRNA binding	Interproscan
GO:0030620 all species →	Molecular Function	U2 snRNA binding	Interproscan
GO:0030623 all species →	Molecular Function	U5 snRNA binding	Interproscan
GO:0071013 all species →	Cellular Component	catalytic step 2 spliceosome	Interproscan
GO:0097157 all species →	Molecular Function	pre-mRNA intronic binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0008233 all species →	Molecular Function	peptidase activity	Interproscan
GO:0008237 all species →	Molecular Function	metallopeptidase activity	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12856	PRPF8, PRP8; pre-mRNA-processing factor 8	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_001633987.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

48TPM > 0

16Conditions

43.1Max TPM

22.8Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	24.26	28.41
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	16.64	24.21
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	14.72	15.27
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	20.54	26.08
whole 6 week old aboral regenerate · regenerate uncut	3	3	13.72	15.29
whole 6 week old aboral regenerate · regenerate 4hpa	3	3	23.30	27.10
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	25.06	30.20
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	24.63	28.10
whole 6 week old aboral regenerate · regenerate 24hpa	3	3	23.86	27.87
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	23.43	26.00
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	18.48	20.96
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	32.60	43.14
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	28.67	34.81
whole 6 week old aboral regenerate · regenerate 48hpa	3	3	32.81	41.79
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	20.43	21.70
whole 6 week old aboral regenerate · regenerate 12hpa	3	3	21.14	28.23

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	28.41
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	26.09
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	18.29
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	24.21
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	14.41
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	11.30
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	15.27
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	14.98
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	13.90
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	26.08
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	21.72
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	13.82
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	15.29
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	15.22
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	10.64
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	27.10
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	22.62
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	20.19
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	30.20
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	25.14
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	19.83
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	28.10
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	23.01
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	22.78
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	27.87
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	22.41
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	21.30
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	26.00
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	24.50
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	19.78
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	20.96
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	18.69
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	15.79
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	43.14
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	29.14
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	25.53
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	34.81
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	27.85
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	23.36
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	41.79
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	31.12
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	25.52
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	21.70
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	20.42
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	19.17
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	28.23
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	21.46
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	13.72

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.