Detailed information of XP_001634252.2 in Nematostella vectensis

Genomic Location: NC_064035.1:12380020...12388502
NR annotation: XP_001634252.2, homeobox protein Hox-C5 isoform X1 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P81192Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=187800 GN=HOXA4 PE=3 SV=1
P09634Homeobox protein Hox-A7 (Fragment) OS=Rattus norvegicus OX=10116 GN=Hoxa7 PE=3 SV=1
P02830Homeobox protein Hox-A7 OS=Mus musculus OX=10090 GN=Hoxa7 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR020479DomainHomeobox domain, metazoaInterproscan
IPR046327FamilyHomeobox protein Hox-A1/B1/D1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45946HOMEOBOX PROTEIN ROUGH-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan

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