Gene detail

Detailed information of XP_001634771.3 in Nematostella vectensis

Genomic Location: NC_064039.1:3068049...3074484
NR annotation: XP_001634771.3, proton-coupled folate transporter isoform X1 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_001634721.3

TGAGGCCAAATATTTTTCTATCCATGGTAGGCTAGGTCAATTTGTCGctaacaaaaatgtttttaattgTACAATTCTATTGTAAAGCTGAAACACACCATATATGATTTTTAGTGATTGACGCAAGAATTTGATGCTTTTCTTTTTAGCTGTTTGTAACACAGTCAAGTAGCATGTTTTTAACCTCCCAGCCCTACCCTCTTGATTCCCGATTCGGCTGTCACGCCTGTCACGTGAAAATTTCCATAGAAGGAAAATAAACTTCTGTTTGGGACAGGAGACCTCTGCCCTATTGTCGTACAGTCTTCAGTCTAAAAGAAGTGAATGTAAACAAGAAACAGGCTCCAATTTTTCAAGAAACTAGTTGATTTAATAAAAATGGTGAATTTCCAGAAGCTGAAATGGAGAACACCAGAAATAGTAGTGTTCCTATATGCATATGGCCTCTTTATGCATGTCCCAGTAATCCAACAGTACGTCTACTCCAGGATTGCAAAGTCCAAAGGCTTTCCATATGATGCCCATAAAAAGACAGGATGTGGAAATATTACTATACTGAATGCAACAATGCAGCATATAGAGCAAGAGGTGCAATCTTTGGCATCATATGTACATCTTGGTATTGTGATGTTTGCTGCACTCCCTTCAGTCGTCATGTCACTTTTAATTGGCAGCTGGACAGATTCTCGAGGACGTAGACCTGCCCTGTTCCTTCCTGCTCTTGGAAGCACCCTAGAGTCCATTGTTGTCATCTTAGTCATGTACTTTGAGTGGCCTATCTATGTGTTGTTTGTTGGGGCTTCTTTAAACGGCCTCTGTGGAAGTTTCACTACAATTATCATGGGTACCATGGCCTATATAGCAGACACAACACATGAGGACCAGAGATCACTAAGACTAGCTATTTTGGAGTTTATGGTATTCTTTGGTGCCATGGTTAGTCAACTCACCAGTGGATTGTGGATAGAGAAATACAGCTTCATCATCCCATACTGGTTCATCCTGTCTTGCCTTAGCTTGTCCTGCATCCTCGTCATTGCCATTGTCCCTGAATCGAGACCACCAGACGtgattcaaaacaaaacagctTTCTGCAGTTGTCGCAGCCTTCAGAATGTTTACAAAGTCTACATGACCCCAAGAGAGGGGGGTCGGAGGAACTTATTTCTTCTAACTCTAAGTTCAGGAGTCACGAACCTCATCTTACAAGGTGTAGCAGGGGTAATTGTGCTTTTTGTCCTTCACACTCCATTGTGCTTTTCTCCTAAGCTTGTTGGGTATTTGTCTGCTCTTCGTTATTTGTCCATTGGTGTTGGTGCTGTACTTGGGATTAAAGTTCTTGGGCGGTGGTTGTCGGTGATAAACATCAGTCGTGTTGGTATGCTGTCTACCATGGCATCATATATTCTGTTCGGATTCTCAACCAAGATTTTTATCGTATTTCTAGTTCCTTTCGCTGGCCTTTTCATGGGATGTGTGGTACCGATCTTGCGTGGGATAATGTCAAGAATAGTCAGCCAGGATGAACAAGGAGCCTTATTCTCAGCAGTGGCCTCTCTGGAAATGTTGTGTCATTTGTGTGGTACGTTTCTGTTCAACTCACTCTACCCTGCCTCTCTCAAGTTTCACTTTCCAGGCTTTGTGTTCTTTCTTGGGGCAATCATCACGTGGATTCCATTCATTCTTATCTGttgtcTAAAAAGCCCTAAATCGCTATTACCAAAGCGTGACCTCGTGAGGACTGGGTACGAGAAGTTTGATGATGATCACTTGGCTGAAGTTGAGGGTTCGTTGGAATGTAGTACTGCCACGCTACCTgacatcaccaccaacatacGGAGCAGAGCAACCACCCCTGGAACGTACGATACAACCCAGGCGAACgcgtgatgacgtcacatccaCGTGGTTTTCTGTGCTCGGAGATGAGAGAAAGCGCAGGTTTCTTGCcaaacacagggaacccggtCAGAACTCCAGCTGATATTgacttatttttcaaaagaaagtaaaagaaACGTAGGAACAATTTAAGGTAGATACTGCTACTGATATTGTGATAATAACTGGCCCGAAGCAAGATTTTTGGCGAGATTTTGTAATCCCTCCTAGCCAGTTCCTGGTTACATAGATTAAACACTAGTATATATTTATGTATACGTCATAAACATATTCACGCATCATATAACATTTtctacaaaacgaagaaaTTCACCTCCATCCAATTGTATCTCCCTTCTCCGTGGACATAATAATCACTGCTATACAATTCAACAAACATCGTTACATTTCTCAGGATATACCCATAATATTACCCAGAGTATAGTTTACTTTTCAAACGAAGTTTAATCAAATATACATACATTGTAACAATGTATATAATAACAGAGACAACAATTCAGTCTGTATACGGATCATCGTCTGTTATTATTAAATTTGTGATTTCTCACTTGAA

Protein

Uniprot

Uniprot term	Description
Q5EBA8	Proton-coupled folate transporter OS=Rattus norvegicus OX=10116 GN=Slc46a1 PE=1 SV=1
Q6PEM8	Proton-coupled folate transporter OS=Mus musculus OX=10090 GN=Slc46a1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23507	ZGC:174356	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14613	SLC46A1; MFS transporter, PCFT/HCP family, solute carrier family 46 (folate transporter), member 1	-	Transporters	ko02000	deepkoala