Gene detail

Detailed information of XP_001635342.1 in Nematostella vectensis

Genomic Location: NC_064041.1:7383327...7385900
NR annotation: XP_001635342.1, phosphatidylinositol transfer protein alpha isoform [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_001635292.3

CCACGCCCTCTCGGTCCGTTTCACCGTGCACGCCGCCATTGCACAAGTTCGCCGGTCGATTCATAATATTCGTCTAATTTCTACGTCTTCCTTTATAAATTTTAGCTAGGGATGGTGGTCATCAAGGAGTATAGGATACCCTTACCAATTTCTGTAGAGGAATACCAAATCGCTCAACTCTATGCTGTGGCAGAGGCCAGCAAAAATGAGACCGGCGGAGGAGAAGGCATTGAAGTTTTAGTGAACGAACCATATACAGCTGGCGAAGGTGGACATGGAAAGAATATGCCTCCCGGAATGGATGGACAGTACACTCATAAGCTCATACATTTACATTCCAAGGTCCCTTCATTTGTACGCATGTTAGCACCGTCGGGATCGCTGGAAGTTCACGAAAAAGCGTGGAACGCTTATCCTTTTTGCAGAACCGAATATTCAAATACGTACATGAAAGAACATTTCTCTGTAATTATAGACACTTGGCACAAGCCAGGTCACAAGGATGAATTCCACAACGTGCACAATCTTGGCAATCCAGAGTTACAAAAGCGAGAAATTGTCAACATCGATATCGTAAATGACAAAGTTGATCCACATGAATACAAGGCGGACGAAGACCCTTCCAAAGTAGGCTCCGAAAAAGCTAAGCGAGGCCCATTGAAGAAGGATTGGCAACAGAAAAACGAGGAAGACCCATCCAAAAGTAAAGAAGGCTATCCTATGATGACATGCTACAAGTTGTACCGTGTTGAGTTCAAGTGGTGGGGACTGCAGACGAAGGTCGAGTCGATAATCATGAAGGCCGTCCATAGATTGCTTCGAAACTTCCACCGTCAAATGTTTTGTTGGATGGATAGATGGTTTGGAATGACTATGGACGATATAAGAAGAATTGAAGACAAGACGAAGAAGGAACTAGACGAAATGAGGCATAAGGGAGAGGTGAAAGGAATGCAAATGTaataatgaaagaaaaatGGAATATTTAGTGATTTCTTTACAATCTCAGTACTGTGCCTTACAATTTTGTCTGCTGGGTCGTTGCTGTGACAACTTATGAAACTCTTTGTTTGGCAAATGGACCTTGGTGTACTTGAATTGTTGCTGTCACAGTTTTGTGGTAAGGATGACATTAGCTTTAGTTAGCAATTTAGCATACCTTCATTACACctttttttctatgatgttGTCACTAGGGACAATATTTACTACAACATCgattaaggtaattcccttgaattgcactgtgcaccccttctgcgcatagtggcacacactgtttgtttgaattttcTGGTATAAGTGTGCGCGCGCCATAGTTgtataagaaaacaaagcaaaaggcgCACGTtctttacttaaaatcgctttgacagaaaaacaaagccggttagttaaatatatacagaaaaaCCTTAGCTACTACCGGTAATTGTTTATGAGACCAGATTTTGGCAACTCGACAAACAGaatttaattttctaaagactatggGCACTccttttgaaaactaagagttggtATTTTTCCtcgcgcgatcagtaaaaacatGTCAACTCTAAGCCCCTCtgttatgaaaaaaatgtcagtacccccattttttattacattttttgaaagcccttaacttcaatattgtttatgcaaagtttaaaaaaaaatctggatagtagaactatttcaagagTATTACCTTAAATATGGAGTTTATTTGTTAAGATTAATAGGAATGAAAATTACATGGTTTGAAAGTTTGAGTTGTTTAGCCATATTTTGGTCAAGAAAGTGCCATGCAGACCAAATCGCCCTATATTTGTATGTATACAGGTTTGGAAAATTATGACTGAGCTTTTGAAACTAGACAAAGTTTATTTCCAACCCCAAATAAATTCAGATACATTCTCTGCCTGCATTTATTTtctgattttattttcaaatttttttaAGCATAATTGGCATTTGCAGTGCAGTTTGATCATTTAAACTACAACAAAGACTGTTCAAGCAATACAGTAGTTTCTTGCACTGTTAATTCATGTATTTCTAAGAAAATTCTGCCATTGGAATTCATGTAAATGATATTAATGGCTAATTTCATTAATCACTTGGATTTGAGTAATCATGTACTGTAATTTCATTAATCACTTGAATTTGAGCAAATCATGTACTGTTTAGTCATCAAGGATTTCAAGGAAAGGTGGCATAAAATATAAGTATTAACCACAGGCCTGAAGCAAGAAACAACGAATTAGGCAACATATTAGATAATTAATTACAAGCTGAGTAAGGCCTAAACTATATTGGTCACTTGTACATATTGGAATTTACACTGCATATTGAACAATCAATAGTTGACAAGAGTTTGAAAGGCAATTAATGGGGCTTCTTGTCTAAGTTACTAGTATTTTTCAGATGAGTTTTGTAAATTAATTTGATGAATGCTTTATTGAATTTGATCAGTGTTGGTTGTGGATTGTGGTGGAATATTTGGCACATTGCTTAATTAAACATTTTATATGCATACTCATTTTATAAGCGTTAAGATGGCATTAAGTAAAAGCTTAAAGTATCGGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2HJ54	Phosphatidylinositol transfer protein alpha isoform OS=Bos taurus OX=9913 GN=PITPNA PE=1 SV=3
P48738	Phosphatidylinositol transfer protein alpha isoform OS=Oryctolagus cuniculus OX=9986 GN=PITPNA PE=3 SV=2
P53810	Phosphatidylinositol transfer protein alpha isoform OS=Mus musculus OX=10090 GN=Pitpna PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004937 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02121 all species →	IP_trans	Phosphatidylinositol transfer protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001666 all species →	Family	Phosphatidylinositol transfer protein	Interproscan
IPR023393 all species →	Homologous_superfamily	START-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10658 all species →	PHOSPHATIDYLINOSITOL TRANSFER PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005548 all species →	Molecular Function	phospholipid transporter activity	Interproscan
GO:0015914 all species →	Biological Process	phospholipid transport	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0008525 all species →	Molecular Function	phosphatidylcholine transporter activity	Interproscan
GO:0008526 all species →	Molecular Function	phosphatidylinositol transfer activity	Interproscan
GO:0031210 all species →	Molecular Function	phosphatidylcholine binding	Interproscan
GO:0035091 all species →	Molecular Function	phosphatidylinositol binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_001635342.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.