Gene detail

Detailed information of XP_001635622.2 in Nematostella vectensis

Genomic Location: NC_064035.1:2222704...2236447
NR annotation: XP_001635622.2, uncharacterized protein LOC5515490 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5515490

ATGTCAACTCTTGTAAGCATCTTCAGCCCAAGGGAGAGAATAAAAATGCCACCTGATTCAACAACAAGTCCAGACAGTCCTTCAAAGAAGTCAGCATTAAAATGGCCTAATGGGGACACAGCATTTTCTCGAAGGCCTTCTAAGAAAAAGATTAAGTGGTCTGCAGATAAGAAGCCAAGTCAAGATGATGGCGATGCTAATAAACCAAAGACAGTGAAGGAGGCACTGGCATCGGCCTCAGCCCCACTATTGAGTGGGAAACTCAGAGATGAGACTTGTGCAATGAAAAATAGTTCGCCTGAACCTGAGGATTCTGGTGATAATGATATCGATAGCTCCCCCTCATCACCTCGTATTTCATCTGCATTGTCAGAGGACGAGTGTAGTCCTTCCACTCCTAACATCTCTTTGTCAGACAGATCTCAACTGAACCAGTCTATTTGTGTTGTCCAAGAGATTGTTGCAACAGAAAGACAATATGTCAGGGACCTTCAAGACATTATTGAGGGGTATCTTGTTCACATGCGTAAAAATGATGCACCTGTCACCAAAGAGAAAGTTAGTGACCTGTTTATGAACATTGAAGAAATCTACACTTTTAACAAGGAGTTTCTGGAAAATCTTGAAGATGCTGATGATGACCCTGTTGAGATTGCATATTGTTTTGTAAACAAGGAGGCTGGGTTTGAAACCTACACAGAATACTGTACCAAATACCCAAAGTCAATGGAGGTTCTTACTGACTGCACTCAACAAAAGGAAACTGCTGAATTTCTCCAGAAACTGCAGACAGATCTTGGACATCCCTTGCCCTTGGGCTCATACCTACTCAAACCAGTGCAGAGAATTTTGAAATACCATCTGTTATTGCAGGTTATTAAGAAGCACTTTAACGAGCAGGAGGACCCAGATGGTTATGATGCTGTTTGTGATGCTCTTGATGCGATGACTGCAATCGCCCAGTATATAAACGAAATGAAACGCCAACATGAGGCTGCCCTTCATGTCCAGGAAATTCAAAGTCAGCTCTCAGATTTTGAGGGGCCTGACTTAACGACGTATGGAAACCTTATTCTTGAGGACTCATTTCGCATGATGGGAACTCGGACTGAAAGATACTTGTTCCTATTTGAGCGGATTCTTCTTATCACGAAAAAGAGAGAGAATGGGTATACATGTAAAGCTACTCTACTGCTATCAAACATGATGATGACTGAGGCCGTACCAAAGGAGCCACTGGCGTTCACCATTATTCGATTCGATAACCAGAAGATCGACTACAGTTTTCTGGCGCGGAACGTGGAACAGAAAAACAAGTGGACGCTCGAGCTAAAAAGGCTGTTACTGGAAAGTCTCGCTGCCACTGTACCCATCAAGGCTAAAAATCTGATTCTTGGTGAGACCAAGACTGACGAAGAAAATACAGATGGTGATGTCAGGAAAAAATCCTTCCTTGATGCTCGTAACCCGAACAATCCCAGAAGGCATAGCTTCCGAGGTTCTATAGGAAGTCAAGCAAAAAAGGGTGACAAAAACAACAATATCAAAGAGGAAGGGGCAAATACCCCAGACAACGAAAAGTCCGCCACCGATACCCCAAGTGACGACAAGCCGCATCAGGACCTAGTCCCCACCAGCCCACCACCGGCCAAGCCCCTCAGTGACCGCGTGGAGAAATGGGAACGAATATCAAACCATGGATTGGATCAGGAAAGATCGAGCATGCGGCTGTCATCAGAGCTTGAAGACGACGCATTCCTGCCTTCTCTGTCCGACCGCAGGCAATCCGCTGAGGATATTTTAGCGCGTACGAAAGAGCGAAGAAAAAGCGATAACTTAACGACAGATCCCCGACAAGTTACGAGTGACAGTGATTACCCGGATGGTGACCATGCGCAGTCGATTCCTTGGGTGCCCAAGCGCAGCTCTAGCTTGAAGCTACTAGAGGCGAAGCTGTCTCTAGAGAAATGCATGTCGGATACAGATTTGTTAAGTGGCGTCGAGGCTCACGCTTTGAATCCTGGGATCGTGGCAAGCGATAGCAACCAGAATATGACGAAACACCTTGATAATTTCTCGGACAATTCCAAAATTCAGAGAACCGTGCGGGAAGTGGCGAAAGCGTTCCAAGTTCCGCCGGTGGCAGAGATGGCTAGTAGACCATGGGAGCCTGCTCCCGATGAGATCCCTCTCAACTCAGAAGAGGATCTCGATAATTTAGTTAAGAGCCTTAAAACCAGTAAAGGCAAAAGCAGCGCGGTCGCACTTGAGGACATGCTCGCGTCCATTGACCGCGACCTGGACGAGACACGCCGCACTATAACGGACGCGCAGATACTGGAGTGTGCGCTGCGATTGCGTAAAGACTCTCAAATTTCGATCAGTAAATATCCTGAAAAGACTACGAGATGTGACTCTGATGACTCAAAATCACGTGATATTCACCAGCCAAAGAATATGAACACTGCGGACCTTCTCTTAGCTGGCTTACCGCGCGCCAGGCAAATTACAACAGTGGACTCGTCTCTGACAAGCTCCGAGCCCGAAGAAAGGGATCTGAAGGCAGAGCTTGCCGCGTGGACAAGACAAACCTCGCAGCTACCTCTCCCCGCCGAGGGTATTAGGACTTGTTCGCTTGATCGTAGGCGTGGTAAAAAGGTCTTCGAAATGTCCTCCTCGCACAAGATCGGTCGTTATAGCGCTGGGGATTTCCCTGTCCAAGAGGTCGACGATAATAAACCTAGTAATGTTTACCGAATGGCGAGGCAGTACTCAAAGCGAATCACTGACGACAAAGTGAAACAGGATATTCGGAGTCGTTCCCGAGGAGAGAACACTCCGCCTAAATCTCCGACCCGGTTAGACCTCTCACCGCGAATAAAAATTGAACGCATTACAAAAGTAACTTTTGATGAGTTGCCGGATGAGAGAAGAGTCATTCGGCGTCGGAGGAGACCTGGGCACAGCGCGCGCGATCAGAAGCGTGCAAGCTGGTCATTTGAGAAAGCGAAACCTGACATCGATGGACTTCACAGAACCATGAGGCGAGAGAGGCCGAGGAGTTTACACGAGATCAAGCCCGCTCCTGAGCTCATTGAATTCGAAGGAGACGAGAACGAGCTCTTTCCTGATGGTTTGGAGCCTGGTTTAGCGCCCGCTATGCTTGCTGGGATGGAAAAGGATGATATTGTCGTCAAAGGACTCGTCAAGCATCTTGTTAATAAATTCAACCCTGAAGAATTGAAAACGTCAAAACCTAACACTGGTGCAGAGCTCCTGTAA

Transcript

rna-XM_001635572.3

GCCCTAGGGGTAGGGGTCTGCACTACCGGACTGCGTTCCTGTGACCAAGATGTGACAGAAAAGAGCAGCAAATTGTTTCTGATTTGACGGTTTTGTGTGTTTTAGGAAAGGAAAAAAGTCTCACAAGTGTCTTATCGAGGAACTCTCTGGAATTTGGTCGTGTTATAGTGAAGAAATGTTACAATGTGGGGAAATTAACTGAATTCGACGAGATATTTCTATATACAGAGATCGTAACAGAGAATTCAACCGGTTTCTGGATCAAAACATGTCTCATATTGGGACGATCTGCTCTGGATTGCTCAACGATTTTTCACCCGTGAGAAAGGGTCAATATTATGACTTTTAGAACTCGAAAGgtCAAAGGTttgaaatactatgtcaactcTTGTAAGCATCTTCAGCCCAAGGGAGAGAATAAAAATGCCACCTGATTCAACAACAAGTCCAGACAGTCCTTCAAAGAAGTCAGCATTAAAATGGCCTAATGGGGACACAGCATTTTCTCGAAGGCCTTCTAAGAAAAAGATTAAGTGGTCTGCAGATAAGAAGCCAAGTCAAGATGATGGCGATGCTAATAAACCAAAGACAGTGAAGGAGGCACTGGCATCGGCCTCAGCCCCACTATTGAGTGGGAAACTCAGAGATGAGACTTGTGCAATGAAAAATAGTTCGCCTGAACCTGAGGATTctggtgataatgatatcgATAGCTCCCCCTCATCACCTCGTATTTCATCTGCATTGTCAGAGGACGAGTGTAGTCCTTCCACTCCTAACATCTCTTTGTCAGACAGATCTCAACTGAACCAGTCTATTTGTGTTGTCCAAGAGATTGTTGCAACAGAAAGACAATATGTCAGGGACCTTCAAGACATTATTGaggggTATCTTGTTCACATGCGTAAAAATGATGCACCTGTCACCAAAGAGAAAGTTAGTGACCTGTTTATGAACATTGAAGAAATCTACACTTTTAACAAggaGTTTCTGGAAAATCTTGaagatgctgatgatgaccCTGTTGAGATTGCatattgttttgtaaacaagGAGGCTGGGTTTGAAACCTACACAGAATACTGTACCAAATACCCAAAGTCAATGGAGGTTCTTACTGACTGCACTCAACAAAAGGAAACTGCTGAATTTCTCCAGAAACTGCAGACAGATCTTGGACATCCCTTGCCCTTGGGCTCATACCTACTCAAACCAGTGCAGAGAATTTTGAAATACCATCTGTTATTgcagGTTATTAAGAAGCACTTTAACGAGCAGGAGGACCCAGATGGTTATGATGCTGTTTGTGATGCTCTTGATGCGATGACTGCAATCGCCCAGTATATAAACGAAATGAAACGCCAACATGAGGCTGCCCTTCATGTCCAGGAAATTCAAAGTCAGCTCTCAGATTTTGAGGGGCCTGACTTAACGACGTATGGAAACCTTATTCTTGAGGACTCATTTCGCATGATGGGAACTCGGACTGAAAGATACTTGTTCCTATTTGAGCGGATTCTTCTTATCACGAAAAAGAGAGAGAATGGGTATACATGTAAAGCTACTCTACTGCTATCAAACATGATGATGACTGAGGCCGTACCAAAGGAGCCACTGGCGTTCACCATTATTCGATTCGATAACCAGAAGATCGACTACAGTTTTCTGGCGCGGAACGTGGAACAGAAAAACAAGTGGACGCTCGAGCTAAAAAGGCTGTTACTGGAAAGTCTCGCTGCCACTGTACCCATCAAGGCTAAAAATCTGATTCTTGGTGAGACCAAGACTGACGAAGAAAATACAGATGGTGATGTCAGGAAAAAATCCTTCCTTGATGCTCGTAACCCGAACAATCCCAGAAGGCATAGCTTCCGAGGTTCTATAGGAAGTCAAGCAAAAAAGggtgacaaaaacaacaatatcaaAGAGGAAGGGGCAAATACCCCAGACAACGAAAAGTCCGCCACCGATACCCCAAGTGACGACAAGCCGCATCAGGACCTAGTCCCCACCAGCCCACCACCGGCCAAGCCCCTCAGTGACCGCGTGGAGAAATGGGAACGAATATCAAACCATGGATTGGATCAGGAAAGATCGAGCATGCGGCTGTCATCAGAGCTTGAAGACGACGCATTCCTGCCTTCTCTGTCCGACCGCAGGCAATCCGCTGAGGATATTTTAGCGCGTACGAAAGAGCGAAGAAAAAGCGATAACTTAACGACAGATCCCCGACAAGTTACGAGTGACAGTGATTACCCGGATGGTGACCATGCGCAGTCGATTCCTTGGGTGCCCAAGCGCAGCTCTAGCTTGAAGCTACTAGAGGCGAAGCTGTCTCTAGAGAAATGCATGTCGGATACAGATTTGTTAAGTGGCGTCGAGGCTCACGCTTTGAATCCTGGGATCGTGGCAAGCGATAGCAACCAGAATATGACGAAACACCTTGATAATTTCTCGGACAATTCCAAAATTCAGAGAACCGTGCGGGAAGTGGCGAAAGCGTTCCAAGTTCCGCCGGTGGCAGAGATGGCTAGTAGACCATGGGAGCCTGCTCCCGATGAGATCCCTCTCAACTCAGAAGAGGATCTCGATAATTTAGTTAAGAGCCTTAAAACCAGTAAAGGCAAAAGCAGCGCGGTCGCACTTGAGGACATGCTCGCGTCCATTGACCGCGACCTGGACGAGACACGCCGCACTATAACGGACGCGCAGATACTGGAGTGTGCGCTGCGATTGCGTAAAGACTCTCAAATTTCGATCAGTAAATATCCTGAAAAGACTACGAGATGTGACTCTGATGACTCAAAATCACGTGATATTCACCAGCCAAAGAATATGAACACTGCGGACCTTCTCTTAGCTGGCTTACCGCGCGCCAGGCAAATTACAACAGTGGACTCGTCTCTGACAAGCTCCGAGCCCGAAGAAAGGGATCTGAAGGCAGAGCTTGCCGCGTGGACAAGACAAACCTCGCAGCTACCTCTCCCCGCCGAGGGTATTAGGACTTGTTCGCTTGATCGTAGGCGTGGTAAAAAGGTCTTCGAAATGTCCTCCTCGCACAAGATCGGTCGTTATAGCGCTGGGGATTTCCCTGTCCAAGAGGTCGACGATAATAAACCTAGTAATGTTTACCGAATGGCGAGGCAGTACTCAAAGCGAATCACTGACGACAAAGTGAAACAGGATATTCGGAGTCGTTCCCGAGGAGAGAACACTCCGCCTAAATCTCCGACCCGGTTAGACCTCTCACCGCGAATAAAAATTGAACGCATTACAAAAGTAACTTTTGATGAGTTGCCGGATGAGAGAAGAGTCATTCGGCGTCGGAGGAGACCTGGGCACAGCGCGCGCGATCAGAAGCGTGCAAGCTGGTCATTTGAGAAAGCGAAACCTGACATCGATGGACTTCACAGAACCATGAGGCGAGAGAGGCCGAGGAGTTTACACGAGATCAAGCCCGCTCCTGAGCTCATTGAATTCGAAGGAGACGAGAACGAGCTCTTTCCTGATGGTTTGGAGCCTGGTTTAGCGCCCGCTATGCTTGCTGGGATGGAAAAGGATGATATTGTCGTCAAAGGACTCGTCAAGCATCTTGTTAATAAATTCAACCCTGAAGAATTGAAAAcgTCAAAACCTAACACTGGTGCAGAGCTCCTGTAACTTCATCAAGCTGTATCTTCTGTGTGTTTCTGGTCTGTTACTCCTGTAACGTCATCTTTAGCTTGTCTCATCTGTGACGACATTTCAGTCCATGCTGTGAGCGTagtctattttattttaaccCACAAAAACCATTACAACTATCTAGTAATTCTAGCGAACAATAAAAACCCAATTGTCTAGTTACACTGCTAGAGTTTTCatgttgaaaataaaatgttttccGGTATCCCATTTCGATATCGTCGCAATCTTTGTAAAGGTTTTGTAAAGTATATTGAACaagaatatgaatatgtcCTTTGCCACTGATTAGCCGTCCAGAGACTATGAGTTTGTCCTTTATCTTAATACAAAATCTTTTACTCAGTTTTGGTCATTGAATCGGCAAGTATTCGTATTTAGTGTTTTTCTTATACATCTCAAATAGGGTTACACTCAAGAATTAATGTGTCATGGGTAACGTTTAAATAGCCGATCTCAGTCTCTAAAAACCATGTAAATGTTTACATGTGCATAAACTTTCaaacttgaa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9ULL1	Pleckstrin homology domain-containing family G member 1 OS=Homo sapiens OX=9606 GN=PLEKHG1 PE=1 SV=2
A1L390	Pleckstrin homology domain-containing family G member 3 OS=Homo sapiens OX=9606 GN=PLEKHG3 PE=1 SV=1
Q4VAC9	Pleckstrin homology domain-containing family G member 3 OS=Mus musculus OX=10090 GN=Plekhg3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003387 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00621 all species →	RhoGEF	RhoGEF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035899 all species →	Homologous_superfamily	Dbl homology (DH) domain superfamily	Interproscan
IPR043324 all species →	Domain	PKHG1/2/3, pleckstrin homology (PH) domain	Interproscan
IPR000219 all species →	Domain	Dbl homology (DH) domain	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45924 all species →	FI17866P1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23859	PLEKHG1_2_3; pleckstrin homology domain-containing family G member 1/2/3	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_001635622.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

42TPM > 0

16Conditions

16.8Max TPM

9.2Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	12.00	16.85
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	7.92	10.55
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	10.84	13.07
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	8.91	10.78
whole 6 week old aboral regenerate · regenerate uncut	3	3	7.37	8.04
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	6.51	9.81
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	6.07	10.09
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	11.66	13.97
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	9.64	16.30
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	13.99	15.76
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	12.16	14.63
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	8.55	11.05
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	9.42	10.61
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	8.55	14.36
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	9.65	11.49
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	4.68	14.05

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	16.85
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	11.12
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	8.04
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	10.55
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	6.81
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	6.40
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	13.07
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	10.68
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	8.79
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	10.78
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	9.23
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	6.71
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	8.04
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	7.66
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	6.40
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	9.81
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	9.72
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	10.09
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	8.12
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	13.97
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	11.72
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	9.28
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	16.30
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	12.61
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	15.76
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	15.20
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	11.03
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	14.63
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	11.53
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	10.32
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	11.05
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	9.78
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	4.82
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	10.61
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	9.87
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	7.78
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	14.36
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	11.30
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	11.49
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	9.08
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	8.38
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	14.05
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.