Gene detail

Detailed information of XP_001636124.2 in Nematostella vectensis

Genomic Location: NC_064040.1:16291761...16294596
NR annotation: XP_001636124.2, carbohydrate sulfotransferase 1 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_001636074.3

GATTAAAAAGGTCAATTGAGCAACAGAGAAAGGAACTCTCACGACAAAGCGCATCCTTGAGACTCCGTATCGGTGGAAGCAAGGTTTTATATGGAGTTTAGCGCGCTAAAGTTGAGCAATTATTCTTTGACGAAGTGACCGTCACTCGAACAGCATGATGGGTACAAGAGGCACGCCGTTCGCGCTGTGTGTTTCGGCGTTAATAATCTTGGTGTTTTACGTTTTGTGGCGGAGTCCATTCAGCAATGTTTTCCATTCTAATTTGGAAAGGGACCTAATTGATCTTGAGACGATTTGGGGAACACAAGATACAAATGAAAGGCCAGTCAGACGAGATAATGGTCAGCACGATGAAATGAACTCAAATGGTCTCCTACCGAAAAACAAACGAAAACAAACGAATCTTATTATCATAAGTCAGGGGCGTAGTGGCTCTTCTTTTGTGGGGGAAATTTTCAATCGACATCAAGATGTGCTGTATTTCTTTGAGCCTTTTCGGGTTCTGGAATTAGTGGATAAATTCAACACATTCATAGGGAAAACTTCGAGACGTTTTAATGATCTGGCAACGATGTTTCTCGGAGAAATGTTAGACTGCAATTTCAAGGACTCTGAATACCTCAGTTATTTTTCCAGGCCTGGACATTTTAGATTTTCAAGTCGCGTTCTGCGCAAGTCACCGTTTTGCCAGCCTCATGATGAAAAACTCAGTTTCCAGGAAattataaagagaaaattatgTATCAATGTTAAGGCTACCGAACTTAGCAAAACCTGCAAAGAGTTGAAAGTCACCGTTGTCAAAATCCTTGAGCATAGGATTATGGGAAGGCAGATACAGAGCCTAAAGCCTCTGTTTGAAACCGAGGCATTTCTTGGAAAAATCCTATACTTGGTCCGAGATCCCCGCGCGGTGATTTCCTCGATGTACTTTGGCGGATGGATGACATACGTTAACGCGCAAAAGCAGATGATATTTTATACAATAAAAAGCGAGAAATTCATCTGGTATGTCAAGAGAATATGCGGCCAGATTGAGTCAAACTTGAAGTTTATAATGAGACCCGAAAGATGGCTGACAGGCAGGGTCAAAGTCGTGCGGTATGAGGATCTAATATTGGAACCGGAAAAAAATACTCGAAAAATCTTCAAATTTGTGGATCTTCCATTTCCTGTCGACATGCGGCAATGGCTTTACAACAGGACTCACTTCAAAGAAGTGTTAAATTCAAATATAGGGACTTTTTCTACTAGAAAGAATTCTACAATCTCGATGCGAAAATGGAGGCTGAAGTCACCCGTAGAAATGGTCTCACTAGTGGAGAAGCACTGCTCAGGCGTGATGGATGCGCTCGGGTATCTTCCCTCGCGTGGATCCCGTGAGATTCTCGCGCGTTTGGATATACCACTCGTGTCCAGACGCCTCATCCGAGCCGGACTGAGATGATAGGAAGAGAATCAGTTACTAAAAGGCGAGTGTTTCCCCTTGGGTTCCACACGCGAGATACTCGAGCGCTGGTAAACATCTCGTGTCCAGATGCCTAACCCCAGCCGGACTGAGATGATAGGATAGGAAATGAGTTAAGGCTAGTGTTTCCCCTTGGGTTCCACACGAGAGATGCTCGCGAGTTTGGATAAACCTTTCGTGCCCAGACGTCTCATCCCCAACTAGACTGAGTAAATAGGATAGGGAATGGGTTACTGTAATGGCAAGTGTTTTACATCGTGCGCAACTCGAGATGCTTGCGCGTTTTATGCTTAGTGACTCGCCCCAGCTagattgataaaaaaataatgatagaACTACAGGACATGATAGAACAATAGAACAGAGTGGTTAACTGGGACACACATGGATTTAAGTTAAAGTTAAAGTTTCCTTCCAACCTGATATTCAGCCGGGGCCTGGGCCCTACTAAAACATAGGACCCAGGCCCCGGCTGAAAATCAGGCTAGTTTCCTACCTCaagtaataaaatgtttcttggtaaaaattaattgttattttgttcAAATCGCGCTATCATGGCCATTGAGAGTCTTTAGTTACCAGGAAcgcaaataaaagaaaattccTATCGACCCGAAGTAGTCCTT

Protein

Uniprot

Uniprot term	Description
Q9EQC0	Carbohydrate sulfotransferase 1 OS=Mus musculus OX=10090 GN=Chst1 PE=1 SV=1
Q5RJQ0	Carbohydrate sulfotransferase 1 OS=Rattus norvegicus OX=10116 GN=Chst1 PE=2 SV=1
O43916	Carbohydrate sulfotransferase 1 OS=Homo sapiens OX=9606 GN=CHST1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00685	Sulfotransfer_1	Sulfotransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR051135	Family	Gal/GlcNAc/GalNAc Sulfotransferase	Interproscan
IPR000863	Domain	Sulfotransferase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10704	CARBOHYDRATE SULFOTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001517	Molecular Function	N-acetylglucosamine 6-O-sulfotransferase activity	Interproscan
GO:0006044	Biological Process	N-acetylglucosamine metabolic process	Interproscan
GO:0006790	Biological Process	sulfur compound metabolic process	Interproscan
GO:0008146	Molecular Function	sulfotransferase activity	Interproscan