Gene detail

Detailed information of XP_001636767.3 in Nematostella vectensis

Genomic Location: NC_064047.1:3915238...3930043
NR annotation: XP_001636767.3, X-linked retinitis pigmentosa GTPase regulator [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5516656

ATGGCGTCGGACGATGAAGATGTACCCGAATCGGGTGCTGTTTTCACTTTTGGAAAAACTCGTTTTGCTGATAACTTGGCAAACAAATTCTGGATTCGAGACGATGCTGTGGTTAATTTATCCTGTGGAGATGAACATTCAGCTGTAGTTACAGCAAATGGTAAATTATATACCTTTGGATGCAACGACTGGGGACAACTTGGTCATGGAAATACGAAATCTTATACAAAACCCAGCGTAGTTAAAAAGCTAAAGCCTGAAAAGGTTTATATGGTAGCATGCGGCAGAAATCATACCATTGCAGCAACTGAATCTGGTCATCTTTATAGCTTTGGGTGTGGTGGAGATGGGCAGCTCGGACATGGGGATGCTGAGGATTCCCATGTACCTAAGATTATAGAAGGTCTTGATGTACAGAAGTACAAGCACTTAGCTTGTGGCTCGGACTTCTCTGCAGCTATTACAGAGAATGGGGAATTGTACACATGGGGGTCCTGTGGTGAGGGTCAGAATGGCCTTGGAGAAGACACAGAGATACCCACCAGGCTTCACCTTCACGGCAAGGTGCGCACGGTGTCATGTGGGTACTATCATATGGCCGTAGTCACAGAGGATGGCTCCCTATATATGTGCGGAGAGAAGGAGGGAGGCAAACTAGGCCTTGACCATGAACAATTAGACAACACCTCACAGCTACAGAAAATTAAAAGCATAGAGGACCAAGTCGTAGTTGCAGCCTGCGGGGCTGAATTCACTGCTGTAGTGACTGAAAATGGATCTGTTTATACCTTTGGTCAAGGCAACCAGGGACAGCTAGGCTTGGGATCCTCTATGATGGAGACAGAGTTCCCTGAGAGGATACCATTATTTGAGAAAGTCAAAGCCAGGACTGTTAGCTGTGGGGAGTCCTTCACAGCAGTAATAACTAAGCATGGAAATTTATACACGTTTGGAGATGGCCGGCATGGCAAACTTGGACTTGGCGATGAGTGTTTTTCTAACACCTTTAAGCCGGAGAAAGTCAAACGATTTAATAACTTTACTGTAAAGATGGTGACTTGCGGAGGGTGTCATATGTTGGTGGCAGCAGAGCGCAAGGATGAGGGCGTTTGTATGACAGATAGCGAGGAGGAGGCGGAGAAAGATGTTTTGTCATCGTCAATATCATCAAATAAGGGAACCCTCTTGGATGTTGTTGATGGACCATCGGATATGAGTGCAACGTGGGGATCAGCCCGGGACAAAAGACGCCAGAGAAATCTAGATAGTATTGGTAATAGTTTAGGCAGCTCTTTGCCACCCATCAATAGATCCTCACTCCCCCCGTTAAGCGGGTTAGGCGGGCGCACATTACCTGCCTTAAATAAGATAAGCACAGGGGAGAAGAAACCGCTCAAAGCTGCCCTAAACCCTCTGGACATGTCAAGATTACCCAAGATACATCCACCAGATGATGAACAAGTTGATGAAGATAATAACATTAAAAACAAAACAACAGCAAAGAAAATCGAAGAGCCCTTGATAAAGGAGACCTCTTCAAAGACTTCAGAATCGACTCCCACGGCCTCACCCCGCCCACTCCCCCGCGGCCTACCCAAGCCACTCCCAAGGACAAAGAAGCCTGAGAAAGAGGAAGAAGAGTCCGAAGAAGAGTCTGAGGAGGAGTCTGAGGAGGAGGAAGAAACAGAAAAAGTTAACAAAGATGCACTAAAAGCAAAAGCGACAGAGGTGAAACAAGTACCCAAAAAAGAAGAGGAAGAATCAGAAGAAGAGGAAAGCGAAGAAGAAAGTGAGGAGGATGAGGAAGAGGGGGCTAAGCCAAGTGCATCTGCCAAAATTGCAAAGACAAGTGAAACTGAAAACAAAGTTCCCAAAGTTGATAAAGATGACGAGGAAGATGATGATGATGATGAGGAGGAGAGCGAAGAAGACGAGAGCAATAAGCCATCCAGCCGCCAAGTGACCGCGGAAAAAGAGGATAAGAAAGGTAAGAAAAAGAAAAAAGAGGAGGAGGAGGAGGAGGAGGATGAAGAAGAAGAGGACGAAGATTCGTCTGGAAAGAAGAAAGGAAAAAAAGATTCAAGCGAAAGTGAAAAAGGAAAGGCAAAGAAACAAAGGAAAGGAAAGGAAAAGAAAGGGAAAGAAAACAAGAAAAATGACGACGAAGAAGAGGAGAGAGACGAAGAAGAAGATGACGAAGAAGACGATTCCAAGAAAGCGTCCGGAAAAGGGAAAAAGGGGCAAGATAATAAAAAGAAAGGCAAAAGCAAAAAGGATGACGAAGACGAGGAGGCAGAGGAGGATAACGAGAAAACTAAGAAAGGAAAAACGGACAAGAAAGACAAGCCGAAAGAAAAGAAAAAGAAAAGCGGAAAAGAAGACGAAGACGAGGAGGAGGAGGACGAAGAAGAAGAAAATAAAGATGGCGACAACATTGACGCGAATAAAAAGGAGGACACTACTGTTGCTGAGGGCGATAAGAAGGCGGCCGCCAAAAAGGAGAAAAAGTCTGGGATATGCGACATTCTATGA

Transcript

rna-XM_001636717.3

aaaaggtataaaaaaataacgcCAAGCCAAAATGGCGTCGGACGATGAAGATGTACCCGAATCGGGTGCTGTTTTCACTTTTGGAAAAACTCGTTTTGCTGATAACTTGGCAAACAAATTCTGGATTCGAGACGATGCTGTGGTTAATTTATCCTGTGGAGATGAACATTCAGCTGTAGTTACAGCAAATGGTAAATTATATACCTTTGGATGCAACGACTGGGGACAACTTGGTCATGGAAATACGAAATCTTATACAAAACCCAGCGTAGTTAAAAAGCTAAAGCCTGAAAAGGTTTATATGGTAGCATGCGGCAGAAATCATACCATTGCAGCAACTGAATCTGGTCATCTTTATAGCTTTGGGTGTGGTGGAGATGGGCAGCTCGGACATGGGGATGCTGAGGATTCCCATGTACCTAAGATTATAGAAGGTCTTGATGTACAGAAGTACAAGCACTTAGCTTGTGGCTCGGACTTCTCTGCAGCTATTACAGAGAATGGGGAATTGTACACATGGGGGTCCTGTGGTGAGGGTCAGAATGGCCTTGGAGAAGACACAGAGATACCCACCAGGCTTCACCTTCACGGCAAGGTGCGCACGGTGTCATGTGGGTACTATCATATGGCCGTAGTCACAGAGGATGGCTCCCTATATATGTGCGGAGAGAAGGAGGGAGGCAAACTAGGCCTTGACCATGAACAATTAGACAACACCTCACAGCTACagaaaattaaaagcatagagGACCAAGTCGTAGTTGCAGCCTGCGGGGCTGAATTCACTGCTGTAGTGACTGAAAATGGATCTGTTTATACCTTTGGTCAAGGCAACCAGGGACAGCTAGGCTTGGGATCCTCTATGATGGAGACAGAGTTCCCTGAGAGGATACCATTATTTGAGAAAGTCAAAGCCAGGACTGTTAGCTGTGGGGAGTCCTTCACAGCAGTAATAACTAAGCATGGAAATTTATACACGTTTGGAGATGGCCGGCATGGCAAACTTGGACTTGGCGATGAGTGTTTTTCTAACACCTTTAAGCCGGAGAAAGTCAAACGATTTAATAACTTTACTGTAAAGATGGTGACTTGCGGAGGGTGTCATATGTTGGTGGCAGCAGAGCGCAAGGATGAGGGCGTTTGTATGACAGATAGCGAGGAGGAGGCGGAGAAAGATGTTTTGTCATCGTCAATATCATCAAATAAGGGAACCCTCTTGGATGTTGTTGATGGACCATCGGATATGAGTGCAACGTGGGGATCAGCCCGGGACAAAAGACGCCAGAGAAATCTAGATAGTATTGGTAATAGTTTAGGCAGCTCTTTGCCACCCATCAATAGATCCTCACTCCCCCCGTTAAGCGGGTTAGGCGGGCGCACATTACCTGCCTTAAATAAGATAAGCACAGGGGAGAAGAAACCGCTCAAAGCTGCCCTAAACCCTCTGGACATGTCAAGATTACCCAAGATACATCCACCAGATGATgAACAAGTTGATGAagataataacattaaaaacaaaacaacagcaaaGAAAATCGAAGAGCCCTTGATAAAGGAGACCTCTTCAAAGACTTCAGAATCGACTCCCACGGCCTCACCCCGCCCACTCCCCCGCGGCCTACCCAAGCCACTCCCAAGGACAAAGAAGCCTGAGAAAGAGGAAGAAGAGTCCGAAGAAGAGTCTGAGGAGGAGtctgaggaggaggaagaaaCAGAAAAAGTTAACAAAGATGCACTAAAAGCAAAAGCGACAGAGGTGAAACAAGTACCCAAAAAAGAAGAGGAAGAATCAGAAGAAGAGGAAAGCGAAGAAGAAAGTGAGGAGGATGAGGAAGAGGGGGCTAAGCCAAGTGCATCTGCCAAAATTGCAAAGACAAGTGAAACTGAAAACAAAGTTCCCAAAGTTGATAAAGATGACgaggaagatgatgatgatgatgaggaggagAGCGAAGAAGACGAGAGCAATAAGCCATCCAGCCGCCAAGTGACCGCGGAAAAAGAGGATAAGAAAGgtaagaaaaagaaaaaagaggaggaggaggaggaggaggatgaagaagaagaggacGAAGATTCGTCTGGAAagaagaaaggaaaaaaagattCAAGCGAAAGTGAAAAAGGAAAGGCAAAGAAACAAAGGAAAGGAAAGGAAAAGAAAGggaaagaaaacaagaaaaatgacGACGAAGAAGAGGAGAGAGACGAAGAAGAAGATGACGAAGAAGACGATTCCAAGAAAGCGTCCGGAAAAGGGAAAAAGGGGCaagataataaaaagaaaggcaaaagcaaaaaggatGACGAAGACGAGGAGGCAGAGGAGGATAACGAGAAAACTAAGAAAGGAAAAACGGACAAGAAAGACAAGccgaaagaaaagaaaaagAAAAGCGGAAAAGAAGACGAagacgaggaggaggaggacgaagaagaagaaaataaagatgGCGACAACATTGACGCGAATAAAAAGGAGGACACTACTGTTGCTGAGGGCGATAAGAAGGCGGCCGCCAAAAAGGAGAAAAAGTCTGGGATATGCGACATTCTATGATCGTATTCTGGAGTACAACTGCTGAGGACTGCTTACCAAGTGACCATGTTTTAAGTGGTGTTATACACAGTGATTCCAACAAGCCCGCTAACAAGTCCAGGCTTTATTATAATCTGGAGAGTTATGGCTTGTTGTTATGGTCTGTTCCATGTAGAAGGACAAGGTATATTGAACAATATTTTATCTAGAAGGTTACTCCTAAAAGTTTAAGGTGACTTGGTGTACCAAGAATACGGGCCTCCTCTATGGTTTTCAGCACGGTGACTTGACAGCAGATCTGATAAGATAGGTCGATGCAAGAAACCTGGAACCCGCTCTTGGATTCGCTCCAGAGCAAAGATACACACGAGGAAGGCTATCCCTAAAATGTCATACGCAGGGGAAAATATTGGAAATGGACAACTTCTTGGCCCTTTGCAGTTGTTGTGTAGTTAAAAATGACTTATTTGCTCTTTGTAGTTGTTGTGTAGTTTGAAATGACTTCTGGGCTCTTTGAAGTTGTTGTGTAGATAAAAGCGACTTCTGGGCACTTTGCAGTTTTGTGAAGTTAAAAATGACTTGTTGGAACATAACTACGCTCTCCTTTGAGCACCCGAACACAACATACTGGTATATCGAAAGACTTGGACTTGATAAGTTTTGTGTACACTGTTTTACCTAGCTACAGACCTGAATGTATGGGGGGAGCAAGTAGCCTGCTAGCTGCGGCCTCTCCCTGGTGTCAGCTCAGCAAAGGGCCCCTGCTAGTGCGGGAACAAGGAGGAAACGTTGTGTTTGGCTTTAAACACCGTTAATTGGACACGTCTCATTTCGAATGCTTCGTTTAGATTCCAAAGAGTATTGGTTAAAAAGGGAAATTAGAGTTAAATATTGGCCTTTATCCTCATTATAGCTGCGATGATTTTAGGTTTCCATTCACATGAGCGATTACACACCTATCTCAAATAGTGCTAAACCAAGTGACCGTTGTAAAATCATGGTTCTTGGCCTAAGtttaaacgtcgtattatccatgagccgtattcgatgcaaatgcatgcaaatgaatcgagtcgattgtttcatcttcatttacatgcatttgcattaaatacggcttatggataatacgacgtttgaacttaggcTAAGTACCATGATTCAAAACCACCTCGGAAGGATtgtaatttataaaaaaaaaagtattaccACTAGCCTGCGTCGCAAGAGTTTGTTTGAGTCATCAGCGGAAATAGAGACAGGCGAAGAGTATGGCCGCTTTTCACTCTCTAGTGCTACTGAAACCCTACACAAAAGCTTGCCACGCGGACTAGAGAGAGATTCATGTGTTTTAGCAAAGCGTGGTCAATCAATGTCCAAAGCATGGGTTCTTTGGGTTCGTAGCactcagcggcgtagccaggatttttgacaggagggggcccaacaGGCCCTTTCAAAGCagttttttctgtattttagataatgtttcatacatttactgtatttttggctgttaAAAGGAGGGGCCcaggccccctgggccacccccctggctacgcctcTGGCACTATGATGCAAGATTTTACACTTCGAGGGctcaacgtttattgaaataggtatatgtCTGTCTTTCCTTAGTGTTACCCCGCTCTTGTCTTGAGCtttccaaatgcaaatgacAATCCAAGTCGATTGTTCgcatttattttcaatttttgaaaGGCATATAAAAAGTAGGCGTTTCGCTCTTGAAAAACAGTTTTGTTGCAGCTCTTATCCTCAAGCTATCTTCATGCCAGTTATCGTGACAGATTTATGTATTTAGATGTTGTGACATTTGATATTGGGTATAGTATCCACTGTACAGAtagttttattattaaaatatagACAAAACTGTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q92834	X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens OX=9606 GN=RPGR PE=1 SV=2
Q9N1T2	X-linked retinitis pigmentosa GTPase regulator OS=Canis lupus familiaris OX=9615 GN=RPGR PE=2 SV=1
Q9R0X5	X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus OX=10090 GN=Rpgr PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005436 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00415 all species →	RCC1	Regulator of chromosome condensation (RCC1) repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009091 all species →	Homologous_superfamily	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Interproscan
IPR000408 all species →	Repeat	Regulator of chromosome condensation, RCC1	Interproscan
IPR051553 all species →	Family	Ran GTPase-activating	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45982 all species →	REGULATOR OF CHROMOSOME CONDENSATION	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19607	RPGR; X-linked retinitis pigmentosa GTPase regulator	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_001636767.3 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

38TPM > 0

16Conditions

6.4Max TPM

3.1Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	4.00	4.77
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	3.45	4.36
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	2.29	2.40
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	5.22	6.44
whole 6 week old aboral regenerate · regenerate uncut	3	3	3.77	4.69
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	4.12	6.18
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	2.77	4.62
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	3.62	4.58
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	2.60	4.54
whole 6 week old aboral regenerate · regenerate 20hpa	3	2	2.79	4.80
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	3.38	4.25
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	2.49	3.81
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	4.12	4.78
whole 6 week old aboral regenerate · regenerate 48hpa	3	1	1.30	3.90
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	2.74	4.68
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	1.19	3.58

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	4.77
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	3.62
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	3.61
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	4.36
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	3.44
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	2.55
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	2.40
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	2.32
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	2.14
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	6.44
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	6.09
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	3.12
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	4.69
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	3.91
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	2.71
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	6.18
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	6.17
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	4.62
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	3.68
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	4.58
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	3.35
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	2.92
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	4.54
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	3.25
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	4.80
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	3.56
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.00
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	4.25
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	3.01
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	2.89
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	3.81
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	3.65
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	4.78
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	3.89
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	3.68
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	3.90
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	4.68
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	3.55
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	3.58
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.