Gene detail

Detailed information of XP_001636914.2 in Nematostella vectensis

Genomic Location: NC_064045.1:3513168...3517598
NR annotation: XP_001636914.2, uncharacterized protein LOC5516913 isoform X2 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_001636864.3

TAATTCTTAGTTATAAGCTCGTGTCACCGTGACGTCCACCATTACTGGAAAATGCGAGGCGATGGGAAGAGAGCCGATCCCGATTTCAGCATTATACCTTATCCTTCTTTTAATGATTGACCCTTTGTTATGTTTACAAGAAACTGCTAGAGATTGTGAGAATGCGATTGGTATTCAATTTCCTGCATCTAATTTCAAGCTAACAGCTTCTGAGTATTACCGTAACTACTACTTGGGCTCAGGAAGATATGCGAATCTTAGTCCAGACAATGCTAGACTTAACCATTCACTAGCATGGTGTGTGCGAACTCGCAGGCGAGACACTATACCATGGCTGATGGTGGACCTGAGGAAGGCAAAGACTGTCAGGGGAGTGGCTACTCAAGGGTTTGTCGGGGTGAACGATTATTTTGTCAAGAGTTATAAGCTGGCGTACAGTGTGGATGCCGTAAATTGGACATGGGTGATGGAAAACAACAGCATCAAGGTATTAGTTGGTAACACCAATGGTGTTCATACAGTTCTGAATCCTACAGGAAATGTAACAGCTAGATATGTGAAGATAGTTCCTGTTGCCTATCACATAATGATCTGCTTGCGGCTAGAACTTTACACCTGCAAACAAGGAGCAGCAATAACAACTTCAACAACAGCATCATCAGTAGCAACTACAGTTACAACTACAACAGCTACATCTTCTAGTATGCTGCCCAACACACCATCCTCATCCCCTTCTACTGGCACCCAACCTTCATCGACGCCCATTCATGAGCCACCTACACAGGGTACTACTCTAGTCACTATGGAAACCAGCACAAGCCATTTAAAGTCGAGTCACCATTCACGGCcaacaacaagaaaaacattaTTCACATCAAAAACTCCTACCTCAACCTTGTCTACAAGTGTTACTTCAGTTACGCCCGGTCACTATGTGCATCATTCCAGTGTTAGCCCCGCCCCAAGGATCGCCCACCCCGCAGATGGTAACCTGACTGTGCCGCTTGTTGTTGGCAGCGGTCTGGCAGGCAGTCTGATCTTTGCTGCACTACTTCTTCTATTGGTGCTGAGAGTTAGAAAAGAAAGAAGGAGGCGGGAAGGAGGTCTGGCAGAGCTTCTTGTGATTGAAGCTCCATTAGTTGAAGAAGAAAAGCCCTTGGATGAAAATGAATCAGAATAGAAGTATGGTCTGAGAAGTTTGAGTCAACTGATGCTTCACCAAGCCTTGCTTTAACTAATGTTATTTGTTGCCGTCTTCTATCTTAATAATAGCCAAAAGGCATACTCTCAGAAACTTAGTGTTGAATAAGCATACAGTACTGGAAAGGGAGTGAAAAATTGCCCCATCCCATTCACAGTGCTAAGTATTATCAATAGCCTGTTTTCCCCAAGGCTATCCcaagggggggtgggtggggctCAGTAAGGTGTTAGAGTCTGACAAATTCCACACCCcaaaaattagaaaaaggttaaaaagatttcaaaccaaaaattgaaaaagaaacCCTGACTTGACCCATATCTTGGGTCCAAGCTCATGGCAATATGGCCGACCTTCCAGTTACAGTGATTTAGTCTCTTTCTTTAAATGTATCTTTCTACTATTTACAAAAATAacttatttacatttttttctaaaagaaTATATTTATTGCACGGTTCCAGAGAGAGCTTGcataataatttattatgaTGGTAAAATTTATAAATTGTACAGGATTTCAGAGAAGATATGtacaaagataaaaaagtattatatttttgtgtGCACAATTCCAGGGAGAATATGCACGTTGAAACATATTCCTGGTAATATTTCCCTAGTTTTTTAATTCATATACAACAAGTCATGGCCATCAAGTTTGCTGTGTTTATAAAAAGTGCACTAGCTCAGTGAAGCTATGCACTATAATTTCatatttgtttgatatttaaatattttttttatttaattgtaCAGTGTCCCAGGGTGGATGTGTACATATGTGGGATAAAATTAGAATTTTACACTTTTTCattgaaaaaatgtattttctattaaaatgttttctgtTACTCAACTCGTGTTCTTGTGTACTTTAAAATTCgctcaaaataaatcaacaagATCATATTAAAATGTTGGGAAAAGTAGAGTTAGCTAGTTTAAAAGTAGGGTGAAATTTCATTGtcaaaaaagcaaattatGGATCAAActgattttgtttattatactAATACACTGTTTCAGTGCAAGTATGTATTAATATATTATCAATAAAACATAAAAGTAGTTATCTTTTA

Protein

Uniprot

Uniprot term	Description
Q08431	Lactadherin OS=Homo sapiens OX=9606 GN=MFGE8 PE=1 SV=3
P79385	Lactadherin OS=Sus scrofa OX=9823 GN=MFGE8 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00754	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000421	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR050633	Family	Neuropilin/Multicopper Oxidase/Coagulation Factor	Interproscan
IPR008979	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46806	F5/8 TYPE C DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0038023	Molecular Function	signaling receptor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15411	PILR; paired immunoglobulin-like type 2 receptor	-	Herpes simplex virus 1 infection	ko05168	deepkoala