Gene detail

Detailed information of XP_001637802.1 in Nematostella vectensis

Genomic Location: NC_064038.1:3665428...3668169
NR annotation: XP_001637802.1, protein BTN1 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_001637752.3

TTTGCTCTTACATTACAAATACATTAATATAAAACTGCATGTCTTATGGGACGAGGTATTTTAAGGGGAATAGAGAAGTGTAGAGGAAATTGTGAAATGGAAATTTTGGCAGTGACGACACCAATCAAACTTTCATCGCTCGGATTTGCCATGACGTGAGAGGCGATTGTTCGGCTGGCTCCCCTTGACTGGTTCAGCAGATAGGACATTGCTATCATAGATGATTGTTTTTCTTATTCTTTTACGGGTTCTTCGCATGCGTTTGAGGAAATACtttaaaaaccaaaacaagaacaagaagagTTGTTGAGAAATATCCACAAATGGAAAATATAGAAAATGAGCCCCAGAAAAGTTCACCAGATGAAATCAAGACTTCAGACCAAATGATCTCAAAGGATGATGAAAGACAAGTCACAGAAACACCACGAGAAGAAACCCCAAATGAAACAGAAATTTCAAAAGAAGGAACACCAGCGGAGAAGGAAAAATGCGTCAATATCTTAGCATTTTACGCGTTTGGCGCGCTTATTTACATAGTATATTCTGTGATAATCGCTGGAGCGCAAGACATTCTCGCGGGGACTTTCATCCCGACCGCTGCAGTGCTGGTCACTAATGTCGGTCCATATTTCTTAGTCACGATGCTGGCTCCATATTTTATCCATAATGTGCCTTACTCAGTTCGTATAGTCTTCATCTACGCCTGTTTTACCATCGGATTGTTCACCATAGTATACGCCAAAGAAGTGTATATGAAACTTGTTGGCATCTGTATTACATCGCTTGGTGCCGGGACGGGAGAAGTGTCGTTTTTTACGCTCACGGCGTTTTATGAACAAGTTACTGTGTCGGCGTATTCGGCAGGAACAGGGACAGGGTTTGTACTGGGACCACTTTATTATACAGGTCTGACTACATGGGGATGTGTTACTCCAAACCgcacgatgatgataatggcggGTTCACCTCTACTCTACATTATCCTATATATCATGATGGACAAACCTCACACCAGGAAAAAGTTCCAAATGCAGCAAGCAGAATTCATGTCCGGGGTCGAAGGCACTGGGAAATTAACTggaaaggaaaaattatcCACCGCCACCCGCGTTTTGCCGTTAGTTATATCCCTCTTCGTAGCTTATGTTTGCGAGTATGTTACAATCCAAGCCGTTATCACGACAATGGCCTTCCCAACCGCTCCGTTCCCTCCCCGAGTACACTACCGGTACTATATTTTCATATTCCTCGCGGGCGAGTTCATTGCTCGCTCGTACCTAGCGGTGATATCCACTCTTGTAAAACCTGAAACATTCTCGCGAATCATCGTGCATCGTGTGTGGATGTTATCTTTACTCCTGGTCCTCCATCTCCTGTTCTTCCTTCTCGCCGCGTGGTATCGGTTCATTCACAGCGTTTGGATCGTGTTTACCCTGATATTCACCGCGGGGCTGCTAGCAGGGGCCGTATTCGCGAACTCTTTTGTGATAGTATCAGAGACGGTATTGCCGCGGTATAAGGAGTTCGCCATGGGTTTCGCTACTATAGGCATGGGCGCTGGTACGTTTCTTGCGGGGGTTATTGGACTGTTAGCGGAGCCCATCATTCGAGACCACTGTCTTCAGATAATGACCAATTGGGATTACTGCTTTACGAGGCCTTTTGGCGGATGGAATAGTACAACCACCTGCTAACTTAGGATTATTAAATGCAATAGAATGCCAGGCCCGTTCTTCGGAACTGAGGGGTTCTGGCCAACatctttattctattttttcgAGGCTTTCTTGGGGAGAACGGTTTACATAACAATAAGTAAGTAGGTTATAGGTATCAAAGAATTGCAACTGGCGCAGATTTAAAACTATTTAACGTTcgaaaaaatgtcaaaagttTCGAAAGCATGTCCCCGGGCCGTCCCAGATTTGACGCGTTTGATACGTATCCaaagtttattttcaattCGACCCCCCCTGACTCAGGGGCCCCTCTGTCTTGAGCCCCTTCTGCCACGCCCTGCTCCGCTGCGGTACTGCCCTGCCATTCTATGGTGTAAGGTCTAAAAACGACAtaacaaataaacagaaaataacttttttattcttgaaataaaataaagacatTTTTACTCCC

Protein

Uniprot

Uniprot term	Description
Q6BZW3	Protein BTN1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=BTN1 PE=3 SV=1
Q4HX89	Protein BTN1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=BTN1 PE=3 SV=2
Q2GN49	Protein BTN1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=BTN1 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02487	CLN3	CLN3 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003492	Family	Batten's disease protein Cln3	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10981	BATTENIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005773	Cellular Component	vacuole	Interproscan
GO:0051453	Biological Process	regulation of intracellular pH	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12389	BTS, CLN3; battenin	-	Lysosome	ko04142	deepkoala