Gene detail

Detailed information of XP_001639066.1 in Nematostella vectensis

Genomic Location: NC_064043.1:11231142...11236605
NR annotation: XP_001639066.1, mitochondrial ornithine transporter 1 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_001639016.3

CGTGCAGCGGTCATTCTTAGTGTactaaaagtttatttttgacCTGCTACAAAAACCTCGTGGCTTTTTCTATTTTGTGTTTAGGGCCACATTCCAGTCTTTGATTGATCTCTTAGGCAGTACAAAGAGAAAATGGGAGGTATAAAATGATTTTCTGCGTTTACTCGAGTGCATAGCGGAAGTTCCAATATCGATTTTTTACCTTCGTCAACTCACTGCACTATTCGTACAAAAATGGACTTGGAAAATGCGAAGCGAATGGCAACGGACTTCACCGCTGGTGCGATGGGTGGAACTGCCTGTGTGTTTGCCGGTCAGCCATTTGATACGATCAAGGTTAAAATGCAGACATTTCCGTCGATGTCTAAAAATGCCTTGGATTGCGGTATAAAAACTTTCAAGCAGGAAGGATTCAAGGGGCTCTACGCCGGCACCATACCCTCTCTAGCAGCTAATATCGCAGAGAATTCCTTCCTCTTTTTATTCTATGGACAATGTTTGTCGTTGATTAAGACATTGACTGGAAAGAAGCACGAATCAGAGCTGACAATATTTCACAATGCTTGTGCAGGGAGTGGCGCTGCATTTTTCATGTCGTTCGTGCTCTGTCCTGCCGAACTTATCAAATGCCGATTACAGGCACAACACCAGACGAACTTGATCTCTGGAATGGCTGGACCAAAAAGTGGTGTTATAGATGTGACAATGCAAATCATCCGTAATGATGGCTTCCAAGGTCTCTTCCGTGGTATGACTGCCACCTGGGCTAGAGAAGTACCAggctatttctttttctttggtGGTTATGAGTTCAGCCGATACATGCTGACACCATCTGGGGGGGATGTCAGGGATGTAGTTAAGAGCCCATTAAAGATGATTCTTTGTGGGGGCTTTGCTGGGACATGCCTCTGGACAGCGATATTTCCTGCAGATGTGGTCAAATCAAGGATACAGATATTATCATCAGGAAAAGGAAAAGCCCCAGGATTCTTAGAGACTCTTATTCTCATTTTTAGAACTGAAGGCTTTCGAGTGTTGTATAGGGGGCTTGGACCATCCATTATCAGATGTTTCCCAGCAAATGGTGCTTTATTTATGGCCTATGAAGGGACCCAGTCATTACTGAAGAATGTGTGACACCCTTGCAAGTGCAAGTCCTCTGGTCACCCTGTGGAATTGATCAGCCCATAGAACCAAATGTAATTGTGTCAATGTCAGAGCACAGCGCACCACCACACTGGGCCACAATAGTAACTATCACGGTACAACTTCCCCTCAAAGGATTTTTAGAGTATTATCTTGAAATTTGTTCATCAGACACTTTATTGGAAATAATGATTTATATCATTTGTGGAGGATGGTATTGTGGGACTTATTACTGTGCCTTTATCCGCTATCAACAAGGCAATGATGAGCTACAGTTCCTATGCTCTActtacagtggaacctggattttacaatAACCTCGATGgtagaaatacagtgaaaaGTATAACAAATTACTCCAATCTAATTATATTGGATACAATGATGCTTGATTTTACCATAAAAATCTCTTCTTCCAAGCGTAATTTCAACCTTGATACAACTATATTACTGATTTTGTCTATCAACAGATTACAgctaatctttttttttttttacttttttgatGACAGATCGTTTTAAATGCAGTTTTACAGAGTAATTGTACAGTCTTGCACAGATTACagttacaatatttttattttataaaagctGGTTATCAAACCGACCTCGCtacaacaatattttcaatgtattttcctttatatcgtaaaatcgaggacctcaattttacgatacattttCCTTCTACCAAGGCATACCATAAAATCTAGGTTCCACTGTTCTTCGGAAGacaaattattctaaaaatCGTCATGAAACCAATAGGCCACatcaataggccattccaaaATAGAAACCTACCTGAACTACCGTCATGCAGCGCATGCTTCGTTTGGTGCAAGCTTAACAATGTGCACACTGTATTCTTGTAGTTGAGTTAGGTTTCTATTGTAATCAGGGGTGGAgcagggggtggcctagggccTCCCCCCCTTTAAGCAGCTAAAactacagtaaatgtatgagacattatttaaaatacaggagaaaatgccttgaaaaacCCTTTTGGGACCCCTCCTGTTtgaaatcctggctacgcccctggtaATGTGCGCACAAGATTACCATATTTACTCATGCATAATATGCACTTATGTATAATACACACCCTGATTTTTTAGgtcattttcaaaaaaataataatagaaaagtaactatatttgacaaaaaacccTAGATGAGAAGTATGTtgaaatataaacattagTTCGCCTCGAAGACATTGAAAACAAGTAAACTTTTTCATGCCCGAGTCCTTTATGGCGCACTCTCCAgactttttctttaatttagATTTGGTATGTCAAAACAACCCCTCACAGAGTTTAAAAACTTGACTAACTTGTTTGCGGAGGGTTGAAATACTCAAGAGCTTTCTcttgttttaattattatgCAAATTTTTTTACCTCTAAAACAATAATTTTCATGTATAATATGCTCCCCGATTTTGCAGGTCATTTTCACATGAAAAAAGTGTGTATTATACATGAGTAAATACGGTaaagctggaatggcctattggtGTGTGTATGGAAGGTAGGCtgtttttcaaaatgaaatcatcatcatgttttgttttttttttttatcaggagGCATTCTGTTTTCTAATGTTATTATATAAACCAAATGGTTGCAACCCAATAAGGTTAGCTAATTTAACTTACACTGATAACTCTGTTATTTAAGCAATTATTTGAATTTTCATTTAAAGTTAGAAAGGAAAGTAGGTTCTATAGATAAAGCAACCTTATGATTTTATTATTctcgaaaaagaaaagagcttGAAAAATTcatttataatatttataatgTGTTTTGTTATTGCTTATCTATCAGCAGAGATGAATGTAGTGGTCTGATTAAAGCAAACTTAGTATGAGACATAAGGTTTCCTTTACTACACAGgttttatttaaatatgtttttatataaACTATAAACTGTTTTGTGTAAGCTAGCTAGGATAGGATGTTTATAATATCATTTGTACATAATTTCAAATATATGGTCAATTGTATAACCTATAGgttaaatgtatttttagtatacttatcattttttgttgttgttacattaGAGTGATATATTAATAATTTATACCTGAATCCAGTTATGTAATAATTATTTATCGcaaatggcaattgccaaacGGCAGGGCTACTATCCAAACTTACCACTAAAGGCAGGAAAATGGGAATAACTTGTGGGATTAGTTTACATGCTTTTTTACTCTCAGGGGTAATTATACCTACTAGCCACCATTGGTTGTACAACTACCATTTGCCAGTTGCACCAACAATATTGATTAAAATAGGAAAGTAGACCGCA

Protein

Uniprot

Uniprot term	Description
Q9WVD5	Mitochondrial ornithine transporter 1 OS=Mus musculus OX=10090 GN=Slc25a15 PE=1 SV=1
Q9Y619	Mitochondrial ornithine transporter 1 OS=Homo sapiens OX=9606 GN=SLC25A15 PE=1 SV=1
A0A0G2K309	Mitochondrial ornithine transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc25a15 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00153	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018108	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR023395	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR050567	Family	Mitochondrial Carrier	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45624	MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000064	Molecular Function	L-ornithine transmembrane transporter activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006810	Biological Process	transport	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:1990575	Biological Process	mitochondrial L-ornithine transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15101	SLC25A2_15, ORNT; solute carrier family 25 (mitochondrial ornithine transporter) member 2/15	-	Transporters	ko02000	deepkoala