Gene detail

Detailed information of XP_001639452.3 in Nematostella vectensis

Genomic Location: NC_064046.1:12896813...12912134
NR annotation: XP_001639452.3, lysophosphatidylcholine acyltransferase 2 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_001639402.3

TTTAAAAGACGTTTAGTTGAAAAACTGTTTGTGTGTACCGCACAGCAGTCTCTCTCGTCCAAGGCCCCTCTTAATACGCTCGATCAAAACAAAGTTCAATGTTGCAATGTTGGCATCGCCGTTTCCTGGGTGTCCATATCCGGTTTACAGGATGAAAGCTACGCAAAATAAATCTTCAAGACGGCGATAAACCATTTTACAGCATGAATTCTTTCGTCCAAAGCGAAATCAGGGAATTCTATGAGAGAGTGAAACTTCAAGAACCGGAGATAAAAAACCCGTTTCGTCATCGCTTACATTTGTCTTGGATCAAGAAAATCGAGGTCGCTTTATGTTTTGTATTCATCTTCCCAATTCGTCTCTGTGCCGCCTTAGTCGTGTTCACCCTCATCATCTTCGTGTCGAATGTCATCATCTTCGGACGCGACCCCAGTGACGTCCGTATCCCGCTGTCACCATGGAGACGGAAACTCAAAGGCTTGCTGCGTTTTCTCGTACGGTCGCTTTTCTTCGTGATGGGTTTCCATTACGTACGCGTGAAAGGCAAATTGGCgtcaccacaggaagcccctATCTGTGTGTACGCACCGCACTCCTCCTTCCTGGACGTGCTACTAGCGAGTGTCCTCGATGAAGTGCCCAGCGGTCTTTCCAAGGCTGAAAACTTTAGAAACCCCTTCTTGGGAGCATTGTTCATGGCTTCGGAGTCTATTGGTGTGAGCAGAGATTCGGCCAAGTCACGACTACAATCTGTCGAGGAGGTCAAGTACCGGACGGTGGTCACCCGCGGACAGTGGCCTCACCTTGGTGTGTGTCCGGAAGGGACTTGTACCAACAGAAAAGCGCTAATTACCTTCAAGGCAGGAGCTTTTATCCCTGGATGCCCAGTTCAACCGATACTATTCAAGTACCCTGGAACTCCGgatGTCTACACATGGGTCAATGATGGACCTTCAGGATTTCAGCTTTTAATGTTCATCATGTGTCAACTTCACCATCCCGCAGAAGTCGAGTTCCTTCCCGTCTGGCAACCGAACAATGAGGAAATGGAAAATCCAAAACTTTTCGCTGAAAACGTCCAAAACAGCATGGCGAAAGCCCTTGGTATCTCGACTACTGGACACTCATTTGAGGATGTATTGTTGATGAAAGAGGGCTCGAACCTCGGTCTCCCAGACGACGCCGCAGTAGTTGAATTCCAAAAGGTTTCTTCTAAACTTGGAATGAATCTAGATTATATGAAAGCGAGGCTAGGGATGTTTGTCGCCATCGACACCAACAGAGATGGTTTGATAACGCTGACCGATTTCGCCCGGCACTACAGGCTCCCTATAAGTAGCGCTCTCAAGCAGATGTTTTCCGCTCTCGACCCGGATAATAAAGGTCATGTAACGTTTCGTCAATACCTTATCGGAACAGCGTGTCTCGCGAATATCGGCTCCAGCAAGACCATGGCACAGGACGCACTAACGGTGCTGCAGAGATGTGGCAAATCTATTTCCGTGTTGTCGTCACTAGTGGACCAGCAAACTGTTCAAGGATTATTGCAAAGCATGGACGACATGTTCCGAGACGAGTTCAACGTGCGCAGCAGAAATGAGGAGATGCAAGCATTTTTCAACTGTCATCCAGAGTTTGTGGTTTTGATTACACTAATGACACTCCAAGTCAAGAGGGAATCATGAGCCAGAACTTCAGTTGATGCATGCAACAATAGCAAAGTGTTATATACAcatttttcaaaaaaggttgcacCTGAGAATCCATGTATtgtaacccgcagtggttcatgggtataAACGGCTGAATCCATGTATCTGGAAGTTATGTGAATGATTATATGAACATAAACAAGGATTCTAAAGCTTTTAaaacctggatttgtattttattggcgttattttcttatttacttgatacccatgaagcactgcgggttaggATACACAGATTCTCTGAGGGCAacctttttgaaataggtgtgtaCTTTAAAGTCACTTCAGGGATTTTGTCAATTTATGCAGTTCCTGGCACACTACACACTAGTAAGGCATCGAATAAGAGCTACGGTTCACAGGTTAATTGACTCAACTTTCAAGGGATGCAAGATTTCTATGTTTGCAAGGTAAGGAAGGGATTGGAAGTGTGGTCAAACTTGACTGTGGTCAGGGCAGCATATGGCAGCAGCAAAGGGAGTAAAGAAGCCCCTTAAAGTGTCACCACCAAAAGATGGTAACAAAAGATTATACAGTAATGTATggtatttaaataaaaaaaaagtatgtaACAAA

Protein

Uniprot

Uniprot term	Description
Q7L5N7	Lysophosphatidylcholine acyltransferase 2 OS=Homo sapiens OX=9606 GN=LPCAT2 PE=1 SV=1
Q8BYI6	Lysophosphatidylcholine acyltransferase 2 OS=Mus musculus OX=10090 GN=Lpcat2 PE=1 SV=1
P0C1Q3	Lysophosphatidylcholine acyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Lpcat2 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01553	Acyltransferase	Acyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002123	Domain	Phospholipid/glycerol acyltransferase	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR045252	Domain	Lysophosphatidylcholine acyltransferase LPCAT1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23063	PHOSPHOLIPID ACYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016746	Molecular Function	acyltransferase activity	Interproscan
GO:0008374	Molecular Function	O-acyltransferase activity	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0042171	Molecular Function	lysophosphatidic acid acyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13510	LPCAT1_2; lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase	EC:2.3.1.23 EC:2.3.1.67	Lipid biosynthesis proteins	ko01004	deepkoala