Gene detail

Detailed information of XP_001640231.2 in Nematostella vectensis

Genomic Location: NC_064034.1:10205133...10211640
NR annotation: XP_001640231.2, spindle and centriole-associated protein 1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5520278

ATGGCTTCCCGAGGAGGGTTTCTCGTCGGCGATGGAGCACTTCGCCGACGTAAACCCACTCAAAAGACTACAAACACAGCACTAAAGGCACACAAGACAACAAAGCGCAAGAAAAGAAAGCCTGAATGGGATAGCACAGTGAACGATCTAAATGTTTACAAGGCATCCGAGGATGAAGTGAGGCATAGACATGAGGCACACAAATCTAAGAATTATGGCCTCCCAAGAAAGCAAGCAACTAATAAAGAAAACAGCCCAGGTTATATCACTACACCAAACAGTGCTCAGAGAAAACAGGCCATCTTACAGGAAATTTTGTATGGCCGAGACCAGTTCCAAGATGTTCTTGCTGAGTCAGATAGAACTATGTCTGTTGTAAAGGATCTATTTGGAGATGATCCAAAGAAGTACATGGGATTTCCAAACATCACTGTACCACCTCAAGTGTTGTCTGAAAACACTGAAAGAAATGGTCCAATCGCTGAAGTGCCTGAGGCTCAAACACAGCTGACACAACTAAGCGAGTCGGTAATGCAGACCACAGCACTGAATGAGATCTCAGAAGACGAGGGGAACAGTAGTGGAACAGAGCCCTCCCCGCAAAGTAATCAAAACCAGGCAGCTCAGAGAATGACCTTCCAACCAAGACTAGACCTGCAGAAGTTTAAAGAGTTTGTATCGCAAGAGCAAAATGATAGTGGGCAGCCAAGTTATGAGGTCAAAAATCCTATATCTGCTAGTAGAAGCCAGGGGATACCACCAGGAAAGGTATTACAGCCAGCAGTACAAGCTGAAGATCACAGCTCATTCCTGAGTGGCACAAGCGGGAACACCATTCTTGCTGGAGCCCCTAATTTTATGTTTCCAGCCCAACAATCATCCGGGGAGCCAACCGCCATTGCTGAAATACCAGGCAGTGAACAGCTGGAACAAACAGGTGAGGTCAAAGCAAGGGTCAAAAGTAATGAAAAAGCACCAAAATTGAAAGCAACTGTAAAGCCTGCACAAGGGCCAAAGGGCCTGAGATGTCTAGATGACCTGAAAAAGATGGTGGAGAACCTGGAGGATGAGATAGCCGAGTATGAAATGGAGACTGGCAGAGAGTCAAGTGGAAAAACTAATCAGACCAACTCCTTCAGTGGCTACACATCTGCTCTTGTCATGGCTGTCACCAAGCTAATGAGATACCTTAAAGAGAGTGAGATACAAAGAAGAGCTGAGGCAGTTATTAGAGACCAAATACTGCAGGGGTTTGCAGAGCAGAGAACTCTTATTGATGCTTTGACTAATGATATTGTTCAGACCCAGGAACAGAACATGATTCTCCAAGAAGAGATGCATGTCTACCGTACCAATACAGACAACCAACTCCACTACCTTACACATGAGTTGCAGACTGTTCTGAAGAGTTTTGAATATCACACTGTCCAAAGCACCATTAATGCATTGCACTCTACCAAACCAGTACAACTCCACGCTGGTACCCGTGCAACAAAGTGTGACGAAGTACTTCCTGGAAATGATCTACCATCTGGTGAAAACCCAGTGGTATCTAGAGTGCAGACAGAAGGAGCATACATCCCGGTGTCTAGAGATGGTTATGATGAGGAGCAGTTTAATCTACCAAGAGGAGAAACAGAAAAAAATATTCAACCACAGCCAACAGTTTTAAGCAACGCAAGCCAGAAGGGTCCTACAAATCTGGAATCTGTGCATCAACAGATCAAGAATCCAACCTATCAAACAATACCAGAGCCTGATGCTTGGGTTCCTTCTCATCAACAACAGATTGAGAAGCCACCCTTTCAAACAAGACCAGAACTTGATCCATTGATCACACAGCACATGCACATAGATAATGCAACAAAAAACATTACTCCACAGCCAGAAAACAACCAATTACCAGGCAGCATTGCTGCTCCTCAGCAGCAAAAATTTGCACCATCCTATCAGTCCAATGTGAGTGTGGCAACAAGTCAGCCACCCCAGCCTATGAGTCAGAGGGCGGATCCTCATAGGACACAGCCCTCAGTTGATGGCGCGTCATATGTGACTTTTGACCATAATAACAACGTCAGGCTTCAGTCCATGGATCCGTTCAATCCCCAGGCCTACCTAGCTCCCGTCACATCTGTAGGGGTATTAGGTGTGTCTAACTTTCAAAAACACAATACAGCTAACACTAGGAACAAGGAACAACCCATGAACCATGTGAGCCTTGGGTATCAAAAAGCACCAAAAGGGAGTAGCTTTGATTCATCTGCACCTTTGAGTAGTACAAATGGCACATCCTATCATGGTGGCAAGCCATCTAAAAATACAGTCAACATGCAACCATATTTTGCACCAGTTTGGGGATCCAATACCAATACTACTACGACTACTTCTCCAAATATGTCTTCAACAAACTATACCTCAAGTGTGTTGACTAAAACTGTTATCACATCAGATGATTATTCTAGAACTACAAGGCCAGAAAGCACATTGATGACCCAAGGGACTTCACAACAAACCTTGTCACAGCCTGTTGTTAGCAGTACAGAAAACGGACCTCTAACTTATCCAAACAATGAACTCTCTCAATCCCTTCTCAAGGATGCTGTTGCTAAGATGACAAACAGTGATTGGGACAGTAGGCGGGAGGAGTCATTCATTGCCAGGTCATTCCTAAAAGAGCAGCAAGCTACCGAGCAGTTACGCCAGAGGCTTGAAGTGATTGCGCGCAAGCAGAAAGACATAGCAGCTACACGGGCAGGACTTGCGACTGGGGTGAACCGGAATAAACAACCTGTTGTTGAGATACCTGCAGGCCACTCACAGCAGCCACCCTCCCCACATGTGCACTTTAAGGACCCCTTGGTAGCCCCTAATCAGTCAGGGTCTGACCCTCCCAAGAAGTCCCCCAGTGTCTCGCCCATCCCATTCAAGGTCCCCATGGTCCCTCCTGTACATAAGGTAGATAAGGCAGGAAGGGGGCAAGAGCGACGTGTTGTGGTAAACCTGCCGTCTGCATGGTCAGACGTGTCATCTACATTATCATTATGA

Transcript

rna-XM_001640181.3

CTAGGCTCTAATCCCCCAAGCGAGGCCGGTACCAAGGCGGGAAATTCTAAAGATGGCTTCCCGAGGAGGGTTTCTCGTCGGCGATGGAGCACTTCGCCGACGTAAACCCACTCAAAAGACTACAAACACAGCACTAAAGGCACACAAGACAACAAAGCGCAAGAAAAGAAAGCCTGAATGGGATAGCACAGTGAACGATCTAAATGTTTACAAGGCATCCGAGGATGAAGTGAGGCATAGACATGAGGCACACAAATCTAAGAATTATGGCCTCCCAAGAAAGCAAGCAACTAATAAAGAAAACAGCCCAGGTTATATCACTACACCAAACAGTGCTCAGAGAAAACAGGCCATCTTACAGGAAATTTTGTATGGCCGAGACCAGTTCCAAGATGTTCTTGCTGAGTCAGATAGAACTATGTCTGTTGTAAAGGATCTATTTGGAGATGATCCAAAGAAGTACATGGGATTTCCAAACATCACTGTACCACCTCAAGTGTTGTCTGAAAACACTGAAAGAAATGGTCCAATCGCTGAAGTGCCTGAGGCTCAAACACAGCTGACACAACTAAGCGAGTCGGTAATGCAGACCACAGCACTGAATGAGATCTCAGAAGACGAGGGGAACAGTAGTGGAACAGAGCCCTCCCCGCAAAGTAATCAAAACCAGGCAGCTCAGAGAATGACCTTCCAACCAAGACTAGACCTGCAGAAGTTTAAAGAGTTTGTATCGCAAGAGCAAAATGATAGTGGGCAGCCAAGTTATGAGGTCAAAAATCCTATATCTGCTAGTAGAAGCCAGGGGATACCACCAGGAAAGGTATTACAGCCAGCAGTACAAGCTGAAGATCACAGCTCATTCCTGAGTGGCACAAGCGGGAACACCATTCTTGCTGGAGCCCCTAATTTTATGTTTCCAGCCCAACAATCATCCGGGGAGCCAACCGCCATTGCTGAAATACCAGGCAGTGAACAGCTGGAACAAACAGGTGAGGTCAAAGCAAGGGTCAAAAGTAATGAAAAAGCACCAAAATTGAAAGCAACTGTAAAGCCTGCACAAGGGCCAAAGGGCCTGAGATGTCTAGATGACCTGAAAAAGATGGTGGAGAACCTGGAGGATGAGATAGCCGAGTATGAAATGGAGACTGGCAGAGAGTCAAGTGGAAAAACTAATCAGACCAACTCCTTCAGTGGCTACACATCTGCTCTTGTCATGGCTGTCACCAAGCTAATGAGATACCTTAAAGAGAGTGAGATACAAAGAAGAGCTGAGGCAGTTATTAGAGACCAAATACTGCAGGGGTTTGCAGAGCAGAGAACTCTTATTGATGCTTTGACTAATGATATTGTTCAGACCCAGGAACAGAACATGATTCTCCAAGAAGAGATGCATGTCTACCGTACCAATACAGACAACCAACTCCACTACCTTACAcATGAGTTGCAGACTGTTCTGAAGAGTTTTGAATATCACACTGTCCAAAGCACCATTAATGCATTGCACTCTACCAAACCAGTACAACTCCACGCTGGTACCCGTGCAACAAAGTGTGACGAAGTACTTCCTGGAAATGATCTACCATCTGGTGAAAACCCAGTGGTATCTAGAGTGCAGACAGAAGGAGCATACATCCCGGTGTCTAGAGATGGTTATGATGAGGAGCAGTTTAATCTACCAAGAggagaaacagaaaaaaatattcaaccACAGCCAACAGTTTTAAGCAACGCAAGCCAGAAGGGTCCTACAAATCTGGAATCTGTGCATCAACAGATCAAGAATCCAACCTATCAAACAATACCAGAGCCTGATGCTTGGGTTCCTTCTCATCAACAACAGATTGAGAAGCCACCCTTTCAAACAAGACCAGAACTTGATCCATTGATCACACAGCACATGCACATAGATAATGCAACAAAAAACATTACTCCACAGCCAGAAAACAACCAATTACCAGGCAGCATTGCTGCTCCTCAGCAGCAAAAATTTGCACCATCCTATCAGTCCAATGTGAGTGTGGCAACAAGTCAGCCACCCCAGCCTATGAGTCAGAGGGCGGATCCTCATAGGACACAGCCCTCAGTTGATGGCGCGTCATATGTGACTTTTGACCATAATAACAACGTCAGGCTTCAGTCCATGGATCCGTTCAATCCCCAGGCCTACCTAGCTCCCGTCACATCTGTAGGGGTATTAGGTGTGTCTAACTTTCAAAAACACAATACAGCTAACACTAGGAACAAGGAACAACCCATGAACCATGTGAGCCTTGGGTATCAAAAAGCACCAAAAGGGAGTAGCTTTGATTCATCTGCACCTTTGAGTAGTACAAATGGCACATCCTATCATGGTGGCAAGCCATCTAAAAATACAGTCAACATGCAACCATATTTTGCACCAGTTTGGGGATCCAATACCAATACTACTACGACTACTTCTCCAAATATGTCTTCAACAAACTATACCTCAAGTGTGTTGACTAAAACTGTTATCACATCAGATGATTATTCTAGAACTACAAGGCCAGAAAGCACATTGATGACCCAAGGGACTTCACAACAAACCTTGTCACAGCCTGTTGTTAGCAGTACAGAAAACGGACCTCTAACTTATCCAAACAATGAACTCTCTCAATCCCTTCTCAAGGATGCTGTTGCTAAGATGACAAACAGTGATTGGGACAGTAGGCGGGAGGAGTCATTCATTGCCAGGTCATTCCTAAAAGAGCAGCAAGCTACCGAGCAGTTACGCCAGAGGCTTGAAGTGATTGCGCGCAAGCAGAAAGACATAGCAGCTACACGGGCAGGACTTGCGACTGGGGTGAACCGGAATAAACAACCTGTTGTTGAGATACCTGCAGgccaCTCACAGCAGCCACCCTCCCCACATGTGCACTTTAAGGACCCCTTGGTAGCCCCTAATCAGTCAGGGTCTGACCCTCCCAAGAAGTCCCCCAGTGTCTCGCCCATCCCATTCAAGGTCCCCATGGTCCCTCCTGTACATAAGGTAGATAAGGCAGGAAGGGGGCAAGAGCGACGTGTTGTGGTAAACCTGCCGTCTGCATGGTCAGACGTGTCATCTACATTATCATTATGAACTCCTGGAATATGAAGGACATCAGTGACTAATTccattataatttattttattcaatgTTCTGTTTAGGTCCAGCAATTATATATTACATAAATTATGAGTAGATGTCAaagaacaattttttttactgcaaTGAGTTTGTGTGTCATAGTAAAATAGGTTCGTTATTTGTAATATTAGCTAACCATTAACCATTGGTATGTCattcatttaaaatcaaacaaaagaCAAATTTGTGTGtgcattttttaaatcagATTATGTATGTAGGTAACACTCAACTACTGTAGGGGTTCGACTCGAATGAAAAGTATTGTAAAAATGCTACCCTCGCCCTTGTTAAATAAAcaacattttattata

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8C804	Spindle and centriole-associated protein 1 OS=Mus musculus OX=10090 GN=Spice1 PE=1 SV=2
Q5RKG1	Spindle and centriole-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Spice1 PE=1 SV=1
Q2T9X8	Spindle and centriole-associated protein 1 OS=Bos taurus OX=9913 GN=SPICE1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005044 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15678 all species →	SPICE	Centriole duplication and mitotic chromosome congression	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031387 all species →	Family	Spindle and centriole-associated protein 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31167 all species →	SPINDLE AND CENTRIOLE ASSOCIATED PROTEIN 1 SPICE1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0090307 all species →	Biological Process	mitotic spindle assembly	Interproscan
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0005814 all species →	Cellular Component	centriole	Interproscan
GO:0005819 all species →	Cellular Component	spindle	Interproscan
GO:0046599 all species →	Biological Process	regulation of centriole replication	Interproscan
GO:0051310 all species →	Biological Process	metaphase chromosome alignment	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_001640231.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_001640231.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

32TPM > 0

16Conditions

3.3Max TPM

1.0Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	1	1.11	3.33
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	1.46	1.89
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	0.90	1.30
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	1.00	1.33
whole 6 week old aboral regenerate · regenerate uncut	3	3	0.71	0.72
whole 6 week old aboral regenerate · regenerate 4hpa	3	1	0.33	0.99
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	1.46	2.36
whole 6 week old aboral regenerate · regenerate 36hpa	3	2	1.29	2.13
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	0.61	0.95
whole 6 week old aboral regenerate · regenerate 20hpa	3	2	0.53	0.87
whole 6 week old aboral regenerate · regenerate 16hpa	3	2	0.49	0.80
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	1.99	3.27
whole 6 week old aboral regenerate · regenerate 60hpa	3	2	1.76	3.06
whole 6 week old aboral regenerate · regenerate 48hpa	3	1	1.01	3.03
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	0.62	1.06
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	0.23	0.70

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	3.33
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	0.00
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	0.00
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	1.89
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	1.30
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	1.17
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	1.30
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	0.74
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	0.65
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	1.33
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	0.93
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	0.73
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	0.72
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	0.72
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	0.70
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.99
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	2.36
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	2.02
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	2.13
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	1.74
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	0.00
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.95
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.88
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.87
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.71
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.00
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	0.80
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	0.68
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	0.00
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	3.27
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	2.69
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	3.06
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	2.23
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	0.00
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	3.03
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	1.06
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.81
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.70
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.