Detailed information of XP_001641783.2 in Nematostella vectensis

Genomic Location: NC_064043.1:7755674...7766966
NR annotation: XP_001641783.2, pre-mRNA cleavage complex 2 protein Pcf11 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
G3X9Z4Pre-mRNA cleavage complex 2 protein Pcf11 OS=Mus musculus OX=10090 GN=Pcf11 PE=2 SV=1
O94913Pre-mRNA cleavage complex 2 protein Pcf11 OS=Homo sapiens OX=9606 GN=PCF11 PE=1 SV=3
Q10237Uncharacterized protein C4G9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC4G9.04c PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04818CIDCID domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008942Homologous_superfamilyENTH/VHSInterproscan
IPR006569DomainCID domainInterproscan
IPR045154FamilyProtein PCF11-likeInterproscan
IPR047415DomainPcf11, CID domainInterproscan
IPR002014DomainVHS domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15921PRE-MRNA CLEAVAGE COMPLEX IIInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000993Molecular FunctionRNA polymerase II complex bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005849Cellular ComponentmRNA cleavage factor complexInterproscan
GO:0006369Biological Processtermination of RNA polymerase II transcriptionInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan
GO:0031124Biological ProcessmRNA 3'-end processingInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14400PCF11; pre-mRNA cleavage complex 2 protein Pcf11-Messenger RNA biogenesisko03019deepkoala

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