Gene detail

Detailed information of XP_001641844.1 in Nematostella vectensis

Genomic Location: NC_064043.1:6331200...6333948
NR annotation: XP_001641844.1, trace amine-associated receptor 4 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_001641794.3

AATAACAAAATGgctaattttatttaaaaatctcACTTGTACTTTAATGTTTTTATCACATCTGTTGACTCAAGTTTTCGTAGAAGCCCGATAGTCATTTCAATCTCTTTATCAAATAGTCAACAAAACTAAGCTTATATCCCATCATTTAACAAAACTAAGCTTTTTTTCCATCATTCTAGCTTTTCATTCGTCGTCTGTATACTTTTAAGACCATTAAATGTATACAGGCGGCCCTTAAGTTGCGTGGAACAAAAAGACAAGACGTCACCAAAATAAAGTGCATCTGTTATCCTCTCAGAGCGTTTCGAAAAAAAGTCAACTTCTATGCCATTGGCACAATGATTTGTTGATATTAGAAAGTCCCGAACGCCaatgaaaaaaatccataaGTTTAGACAGCTGCCTAGATGCAGAGCAAatccaagtttttttttaaaccccatcatttcaatgaaataaagggaaaagttttattttatctgcGAATGTTTAGTTCCTACAAGTGTAACCCAATTTCAGGGCGCAGTGACGACACATCCTAGATATCCTACTCCACACCTGAATAAAGGGCAACAAGGCACAGTTATACCGTCTAGAGTTCAAAACTTATGAATAACTAACAAGTACAGATTGCAAGCTTTTAGCGCTCTTCAATAAACGACAAGAGCGATGAATGAAAGCGTTGTGAATACTGAAGTATGCAGACTCTTCGTTATACCATCCTACACCACCAACACAACAAACGAGTTATTCACAGTCACAGCGATCGTCAACTGTGTCCTCAACAGTGCCATCGCCTTGTCGGCACTCCTGACGAACATCGCTATTTTACTAGCATTTGGGCGCGAGCCCAATTTACGTAGCAACGCTAACTTCTTACTAGCCTGGCTAGCCCTGACCGATGTTTTGGTTGGAGCTGTGGTACAGCCTTTGAACATTGTGCTTCATATAGCAGTGCTgcaaggcaaatatttttgcGATGTGACGGCTGCATTCGACGCAACGAAGTTCCTAACGTCGATGATGTCTGTGGTAACTGCGCTCCTGATCAGTGTAGATCGCTGCTTGACAGTCTCGCTACCCTTCAAGTACGCCATCCTCGTCACCACCAAGAGAATCACTATTGTACTCATCAGTTGCTGGGGGTTCTGGACCGTCATCGTCGCTTCTTGGACGCTTGGCGTTGCGGGCGCCATCTTGCAACTTAGTTGCATCGTCCTTCTCATATTGACATTTGTAATTCTAGCAGGGATTTATACAAAAATGGCACAACTGGCGCAACGTCATCGCAACCAAATTGCATCCCAGAGCCGGGCAACCCAGAGCAAGATGATCACAGAGACAAAGCAGCACAAAGCTATCAAAACGGCGATGTACGTGATAGGTGCCATGGTGGTATGCTACCTGCCcataatggtggtggtaataATCGACATGTTAGTTGTCATGCAAGAAGAAGTAAGATATGTCACCGTCTCCCTCGCGGAAACATTAGTATTCCTCAACTCTAGCCTTAACCCTGCAATCTACTGTCTCAGAAGTCAAGAGGTCAGACAAGCGGTTTTGAGACTAGTGATTaaaaaggggagggggcagaGTTTCAGATCCAATTATGCTAGTGCCACTACTGGGTACCCACTACAACCAATCAGGTCGGGTGATATATCACCATCTCAGCAGAAATCAGTAGAGTCCACAAcaggaaaacaacaacaccaacaacaggAAGCTGGTTGAGATACGAGGTACCCGCTATACTCTTTCAAGTCATGTGATCTATCACCTTTCAGGAGAAATCAAGCAGTTCAACAGAGTTTCATCATTACATATGTCATTTAAGATACCGGGTATACCCACAACAATATCTACAACCACCTCAAAAGTAATCATTCCACACGATCATGAACTGAACTGAAGATCGGGATTTGAAGGATACCATCCGATTAAACGAGCTCCAAATCCGCTGCACAGCCTTGCAACTCCGTGCCAAAAACTAGGAGTGGTCAAAGGTATGCACTTCTACGCGATACGAGGTTTGCGACTTGCGAGCTGACGGTAATGGCCTTGGGACACAACATTGCCTAGCACAGGAGTTGTCCTTAAATTAGTTGTTGACTAAGGCATATACCATAGACACCGAAAAATGGCACATCGTTGCATACGAATTCAATAGTTAATGTATAATCACCTCGCTGAATAAGCTTTTTTTCACTATAATTCCTACTTTAAAATACGCTAGTCAGCCATAACCTTAAGAATAGCTATGATTCAATATTACATGACAAATTATGTGAAGAAATCTCGAAATCATCCAACTAATCATCTTAAACAACAGATTGTTCATTTTCCAAATCTAATAGATGATGGGTTTGCCAAAATCGAAAAAGGCGGCTAACAGAAACTATTTAATTCCCTCTTATTATCACAGTATTGTAGGCATAATAACAAATTAGATCCTGCAgttgttagtttttttttttgtgaatatcAGCTCGTTCAAAGTGGCACATTCCTTGAGAATGCAATGTGCTAAGTGTTATAGATTATACTATTGCACAGTAAAAGTACAGGGAATTCAGCAATGTTTACATAATGAGTCATTTTCGAACGCTTAAACCAAACTCCCTGCTTAAACATAAcaccaatcaaaacaaaatgtgttTAATGAGATCTAAACATAAATTTACAAtctaaataaattataaactTCAATAACTATCAATACAAATATAATCTATGGAAAATG

Protein

Uniprot

Uniprot term	Description
O42574	Beta-1 adrenergic receptor OS=Xenopus laevis OX=8355 GN=adrb1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR050569	Family	Trace Amine-Associated Receptor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24249	HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan