Gene detail

Detailed information of XP_001641855.3 in Nematostella vectensis

Genomic Location: NC_064043.1:6141386...6148976
NR annotation: XP_001641855.3, rho GTPase-activating protein 24 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_001641805.3

AAGGTCGCAAGCTTGTAGGGACAGCGCTCGCTGTAGGAGCGAAACCAAGGGAAATACATCCAGTTGAAGTAGGGATACGTGTTTTATACCACAttaacaagacattagaccTTATTTGGGAGTAAAATTATCCTATATAGCCAGTGGTACAAGACCCCGCGGCGCTGTCACAATCTCTGTTTACTAGTTCCCAGCCCCTCGCTTTCCGGGGGAGTAGTCAAAACCAACATGGCCGACGACCGAAGGCAAGCCTTGTGTGCATTCCACAGCGGCCATGCACGTTGTCTTTATTAGACCCCTCCATCAACGCGCAGTATGCAGAAACCACCCCCTCCGGTCCCTTCGCACCCCAAGGCCAAGCAGAAAGTGGTTTTCTGTGGATGGCTTAGAAAAGAAGGAGGAAGTTTTAAGACTTTAAGATCACGATGGTTTGAAATAAAAGGCGATCAGCTCTATTATTACAAAGACAAATCAGATCCACGACCTGCTGGTGTGGTCCCACTTGCTGGAAATGAGGTCATCCGACATTCTCCAGACCCTATGGATCCTGGAAATTACAAGTTTGAGATTGTTTCCGGTAAAAACAGAGAGGGTAGACCTGTTGTTGGATCTCATGAAACATTTGTGATGATTGCATCGACGATGGAGGAAATGGACCGCTGGATTGGTGCCATCAACCGCATCATATATAAGccatATGGTGGAGGAATGTTTGGAGGAGACCTGTGTGAAACCGTAAAATTTGAAGCAAGGAAAGGAGGAGGCTTTGTCCCCATTGTGGTTGACGTTTGTATagaatatattaaaaaatatgGACTTGAAGAAGAAGGGCTGTTCCGGCTTCCTGGAAATGCAAAACATATCTCAACTCTCAAAGCTCAGTTTAATCGAGGTGAAAGCCCTGAGTTGTCAGATGAGAAGGACATTCACACGGTGGCATCATTACTGAAACTTTACCTGCGTGAGCTCAGTGAACCTGTTATTCCTTATGACTTCTTTGAGGTTTTTCTCACTGCTGCAAAATGCTATGAGATGTATGAGGAGGATGGTATAACTTCCATAACGAATCATCTTAAGCAATTACCTCCACCTAACTTCAATTTGCTCAAGGTGCTAAGCCGATTCCTGTTTGAAGTTCAGCTACACTCAGCCAAGAGCAAGATGGACATTCGCAATCTGGCTATGGTTTTTGGTCCTAACATTTTACGCTCAGGGTCTGAAGACCCACAAGTAATGATGGAAAGTACAGGCCAAGTTACTGCCTTGGTCAGCATCTTCATCAAACGCCATCAGCTCTTCTTTCCACACACTGATGATGAGAAAACTTACACAAGGCAAAATAATACCAGcCAAGACCCCACTGCTAACCTGATCGACCTAACCTTCGGATCAGACTCGCCCAAGCTCTTGCGATCAGGCATGCAGTCTCCATCGGGGAACTTCAACCCTCTGGACGCCAATGAGCTTTTCCCGACCGAGGACTCTACGAGAAATGGCGCGAACGTGGCAGACGaGGGAGATTCGAAAATCCAGGAGCTAGAAAGTGAAGTCGAGCTACAAGCCCGGCGGATTAAGGACTTACAGGTGGAGCTAGAGAAACAGAGAAAAGTCCAGGAGATGCTGCTTATCAGGCTGTCAGACGAACAGCGAGCAAGAGTTGCTGCTGAAGAGAGACTTGAAAAGCTGAATACAGCAATGGACGAGTTTTGCGGGAAATTTGGAGGATTTTCAATCAGTCAATAGACATGTTGCCTTATGTACAAAAAACAAGAAGCATAACGAGCTAGACATCAATCTGTCAGCAGTGTATAACTAACCGTTTCTCGTTTATATTCTTTCCTTTcgcgtaaaaaaaaatgagaaaagagaaaaataaagcTCCATCTACACTAACAATTTATTTTAGTTTACAATTTTTTATGTGACAATTTGTATTTGCTAGTGTAGATGGAGCAAAGATGGCAATTTTTATGTGGCAACTATAGTTGATCAAAAGCTAGCAGGTTTGCTTTTTCTCAGCAATTAAAAATTTTCACACATGAAAAATTGCTAGTGTAGATGCCAACAAATATAGTTGTCAACTTAAAATTGTTAGtgttgcacccccccccctcccttcccttggcggccaaaaagtgggtattTTTTTACTATGCCTTTTCCATGTGATaccactgcgcacccccccggCCGGTCCTGGAAATGCGCCTGcgaagattaaaaaaaaaacgcttggTCACTGGGTTACTTCGTTTTGTTTGTATTATTCTGAGGTTGTAGATCTTACTTCCTCCACTGCTTTAGAAAGAACGGCGAAAATTTACACGACAAAATAAAACGatggaaattaaaaaaaggccaGAAATAAAATGCAATGTTAAATTCA

Protein

Uniprot

Uniprot term	Description
Q8N264	Rho GTPase-activating protein 24 OS=Homo sapiens OX=9606 GN=ARHGAP24 PE=1 SV=2
Q5U2Z7	Rho GTPase-activating protein 24 OS=Rattus norvegicus OX=10116 GN=Arhgap24 PE=1 SV=2
Q8C4V1	Rho GTPase-activating protein 24 OS=Mus musculus OX=10090 GN=Arhgap24 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00620	RhoGAP	RhoGAP domain	Domain	Interproscan
PF00169	PH	PH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000198	Domain	Rho GTPase-activating protein domain	Interproscan
IPR008936	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR051025	Family	Rho GTPase-activating	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15228	SPERMATHECAL PHYSIOLOGY VARIANT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0090630	Biological Process	activation of GTPase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20642	ARHGAP22_24_25; Rho GTPase-activating protein 22/24/25	-	Membrane trafficking	ko04131	deepkoala