Gene detail

Detailed information of XP_001641866.1 in Nematostella vectensis

Genomic Location: NC_064043.1:5855291...5859378
NR annotation: XP_001641866.1, leucine-rich repeat extensin-like protein 5 isoform X1 [Nematostella vectensis]
Species abbreviation NVECT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9HD15	Steroid receptor RNA activator 1 OS=Homo sapiens OX=9606 GN=SRA1 PE=1 SV=2
Q80VJ2	Steroid receptor RNA activator 1 OS=Mus musculus OX=10090 GN=Sra1 PE=1 SV=4
Q6QGW5	Steroid receptor RNA activator 1 OS=Rattus norvegicus OX=10116 GN=Sra1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005886 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07304 all species →	SRA1	Steroid receptor RNA activator (SRA1)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009917 all species →	Domain	SRA1/Sec31	Interproscan
IPR040243 all species →	Family	Steroid receptor RNA activator 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18834 all species →	STEROID RECEPTOR RNA ACTIVATOR 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0030374 all species →	Molecular Function	nuclear receptor coactivator activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_001641866.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.