Gene detail

Detailed information of XP_001642071.2 in Nematostella vectensis

Genomic Location: NC_064036.1:14300436...14314460
NR annotation: XP_001642071.2, golgin subfamily A member 6-like protein 1 isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5522316

ATGTCTGACCACGAGAGAGAAAAAGAAGTAGAAGCCATCGATGATTCTAGTGAGCACGAATCAGACGAAGAGCGTATTGAGGACGCCGGTAAAGCACAGGACGATGTCTCCGAATCTGAGAGCGAATCGGACCAAGATGGAGCTCTCAAGAATGGAACCTCTGATAACATTGGCAACGATGATGAGCAAAGGATCTCGGAAGATGAACAAGACGTTGATAAATCTAAAGAGAGTGAGGAAGTCGCGGATAAAGGCAGTGGGTCTGAGACGGAGAGCGGTAGTGAGTCGGACTCAGAGACAGAGAGTGAGACGGAGTCCGAAACTGATTCAAGTGATAGCGAATCGGATAGCAAGAAGGTAGGAAAAATCAATGTAGAAGAACTTCCTAAACTTGGTACTGCCGCTTCCTTCAAGTCGCGCTTTGAGCAAAAAGCGGAAGAAGACGCCAAGGTAAAAACGTCAGTTCAAAAGGTTGAAGTCCAATCGGGAAAAGCCCGGATGCATCGACAGATCTTCGAGCAAAAGATGAAAGATGACGCGAAGGTCAAAACCTCCGCTCCAAGGATCGAGGTCGATGGCGAAGAAGTAAACTTGTCGGGGAAGGCACTTTCTCACAGGGCGATGTTCGAGAAGAAAGCAGTTGAACATGCTCAAGTGTCTCCATCAATGCCAAGAAAATTCGAAGATACAGAGTTTTCCGTTAAAGCCCGATCCCAGAGAGAGTTGTTTGAAAGGAAGGCAGAGGAACAGGCAGGGACTTCTCCTACTCCACAGAGAAAGTTTGATGTCGAGTTTTCAGTCAAGGCAAAATCTCATCGTGAAATATTTGAACAGAAGGCTGCAGAAGCATCAGCCACAAAAGCTGCAGGAAGAAAGCTTATAGAGGAAGAGCAAGTGTCTGATGAATTTTCAGGACGTGCCAAGTCACACAGGGCTTTATTCGAAAAACGGATAGCAGAGGAAAAAGAGGTGAAAACGAGTAAAGGGGTGGAGGAAGAAATAGCCCCAAAGAGGGGGACTGCTATTTCTGCTGTGAAATTCTTCGAGCAAAAACAGAAGGAGGAGTTTAAAAAAGAAGAAACAGACTACTTAGATGTGTTTAAGAAAGGAGGTACAACAAAAGACAAAATTGAGAAAAAAGATAAGAAGAAACATCACAAAAAGCACAAGGACAAAGAGCACAAGGAGCACCATCATAAGAAGAAGCGATCCCACTCAAAGACGTCCTCCACGACCGACGAGGAGAAAGAGAGGAAGAAGTCCGAGACAAAAAACAAGGATAGTGAGGACGAGGAGAAGGAAAGAAAAAAGTCTGAAACCAAGGAGGAAGATAGTAAAGAGGAGAGAGAGAGGGAACTACAAGAAGAGGAAGAGAGAGATAGGCTGGAGGAGGAACAGGATCGCTTAGATGAAGAACGAGAACGCGAAGAAGAAGACGCAAGAAGGAGAGAGGAGGAAGAAGAGGAGGAAAGAAGGAGGGAAGAGGAAGAAGAAGAGGAAATACGCAAGGAGGAGGAGGAACGAAGGAGAGAAGCAGAGGAAGAGGAGGAAAGACGGAGGGAGGAAGAGGAACGAAGGGAAGAGGAAGAAAGAAAAAGAGAAGAAGAAGAAAGAAAGCAAAGAGAAGAGGAAGAAAAAAAAAGAGAAGAAGAAGAAAGAAAGCAAAGAGAAGAGGAAGAAAGAAAACAAAAGGAAAAAGAGGAAGAAAAGAAGCGAAAGGAGGAGGAAAGAAAACACAAGGAAGAAGAAGAGAAAAAGACAGAGGAATCCTATGACGACTCCTGGCGAGGAAGAAGAGCGCGAAGAAAAGCTGAAGAAGAACGGAAGGAGCGGGAAAGAAGAGAAAGGCTTGAAAAGAAACATTCAGAGCCTGAAAAAAAGACAGAGGAACCTCCAAAAGTCGTAGTCGAACCGACAGTAGAGAAAGAACCAGCTGTCAAAGTAGAGTCTGAAAAAACGGAAGAGGAACCTTTGGATGACGAAGCGAAAAGAGAAAAGGCACGGCAGGAACGAGCGGCAAAGAGAGCTGAAAGGCGGGCGCGCTTACGAGAAGCAACTAGTGAAGAATCAGGAGACAAAGGTCAATCAGATTCTAGCGATCGCAGCTCGCGTAGACACGAAGAATCCGACACATCGTCCAGCAAGGATACGGAGGATGGTGGGGACGACTCGTTTGCAAGGAGAAGAGCAGAGCGGCGAGCTCGTCTGGAGCGCAAGAGACAAGAAGCAGAAGCCGAGAAGAATGGAACGTCAATAAGCACGACTAGCGAGACTACCAACGGCGACGAGTCTCGGTCTGCTCGACGGCGCGCAGCAAGATCACACCAGGAAGACTCAACCACTTCAGAAGAAGAGTCCCAGCAATCTAACTACACCGCTTCTGTCAAGGCAAGGTTTGAGAGAAAAGCCAATACGGAATTCACTAAAGAAGAGTCCGAATCTCGCAGTGAACAGACTTCTGCGGCCTCATCCATGGACGAGGGTGATACTAATTACAGCTCCAGGCGGGCTGGCCGAACGCGGGACGAGACTGATCGTGCTACTCCGAGAGCGAAAGCGGACGATGGCCCTTTCCACTTGAAGAGCCGAAACAAGCTCGATACCAAGTCAAGCGATGATAGCAAGCCAGGGTCAGGGTCGGCCTCGCCGCGCCTTGGTCGATTCTCGGCCCCCCCACAGGAGAAGTGTGAAGTGTGTAACAAGACGGTTTATCCGATGGAGCGTCTTGCAGCCGACAAGAAAGTCTACCATAAGTTTTGCTTCAAATGCAACGAGTGCAACAACACCCTCAGACTCGGTAATTACGCCGCCCTGCAAGGAAAGGTTTACTGCAAGCCTCATTTCAAACAGTTATTCAAGGTCAAGGGCAACTATGACGAGGGATTCGGACGAGAACAACACAAGACCCAATGGTCCGCTAAAAGTAACGGGGAAACAAGTGAATCCAGTTAG

Transcript

rna-XM_001642021.3

ATCTGTTGTTCTTTGCATGCCAGAGGGGGCGGCTAGCCGAGTTTGGATTGTGTGAGCCGTGCTGGTTTTTGCAGGCTAACTGGTTATCATCTCGCATAAAGTAGATTCCACACAGTTGGTAAACGCTCGCACAATGTCTGACCACGAGAGAGAAAAAGAAGTAGAAGCCATCGATGATTCTAGTGAGCACGAATCAGACGAAGAGCGTATTGAGGACGCCGGTAAAGCACAGGACGATGTCTCCGAATCTGAGAGCGAATCGGACCAAGATGGAGCTCTCAAGAATGGAACCTCTGATAacattggcaacgatgatgaGCAAAGGATCTCGGAAGATGAACAAGACGTTGATAAATCTAAAGAGAGTGAGGAAGTCGCGGATAAAGGCAGTGGGTCTGAGACGGAGAGCGGTAGTGAGTCGGACTCAGAGACAGAGAGTGAGACGGAGTCCGAAACTGATTCAAGTGATAGCGAATCggaTAGCAAGAAGGTAGGAAAAATCAATGTAGAAGAACTTCCTAAACTTGGTACTGCCGCTTCCTTCAAGTCGCGCTTTGAGCAAAAAGCGGAAGAAGACGCCAAGGTAAAAACGTCAGTTCAAAAGGTTGAAGTCCAATCGGGAAAAGCCCGGATGCATCGACAGATCTTCGAGCAAAAGATGAAAGATGACGCGAAGGTCAAAACCTCCGCTCCAAGGATCGAGGTCGATGGCGAAGAAGTAAACTTGTCGGGGAAGGCACTTTCTCACAGGGCGATGTTCGAGAAGAAAGCAGTTGAACATGCTCAAGTGTCTCCATCAATGCCAAGAAAATTCGAAGATACAGAGTTTTCCGTTAAAGCCCGATCCCAGAGAGAGTTGTTTGAAAGGAAGGCAGAGGAACAGGCAGGGACTTCTCCTACTCCACAGAGAAAGTTTGATGTCGAGTTTTCAGTCAAGGCAAAATCTCATCGTGAAATATTTGAACAGAAGGCTGCAGAAGCATCAGCCACAAAAGCTGCAGGAAGAAAGCTTATAGAGGAAGAGCAAGTGTCTGATGAATTTTCAGGACGTGCCAAGTCACACAGGGCTTTATTCGAAAAACGGATAGCAGAGGAAAAAGAGGTGAAAACGAGTAAAGGGGTGGAGGAAGAAATAGCCCCAAAGAGGGGGACTGCTATTTCTGCTGTGAAATTCTTCGAGCAAAAACAGAAGGAGGagtttaaaaaagaagaaacagACTACTTAGATGTGTTTAAGAAAGGAGGTAcaacaaaagacaaaattGAGAAAAAAGATAAGAAGAAACATCACAAAAAGCACAAGGACAAAGAGCACAAGGAGCACCATCATAAGAAGAAGCGATCCCACTCAAAGACGTCCTCCACGACCGACGAGGAGAAAGAGAGGAAGAAGTCCGAGACAAAAAACAAGGATAGTGAGGACGAGgagaaggaaagaaaaaagtcTGAAACCAAGGAGGAAGATAGtaaagaggagagagagagggaaCTACAAGAAGAGGAAGAGAGAGATAGGCTGGAGGAGGAACAGGATCGCTTAGATGAAGAACGAGAACGCGAAGAAGAAGACGCAAGAAGGAGAGAGGAGGAAGAAGAGGAGGAAAGAAGGAGggaagaggaagaagaagaggaaatacgcaaggaggaggaggaacgAAGGAGAGAAGCAGAGGAAGAGGAGGAAAGACGGAGGGAGGAAGAGGAACGAAGGGAAgaggaagaaagaaaaagagaagaagaagaaagaaagcaaagagaagaggaagaaaaaaaaagagaagaagaagaaagaaagcaAAGAGAAGaggaagaaagaaaacaaaaggaaaaagaggaagaaaagAAGCGAAAGGAGGAGGAAAGAAAACACaaggaagaagaagagaaaaaGACAGAGGAATCCTATGACGACTCCTGGCGAGGAAGAAGAGCGCGAAGAAAAGCTGAAGAAGAACGGAAGGAGCGGGAAAGAAGAGAAAGGCTTGAAAAGAAACATTCAGAGCCTGAAAAAAAGACAGAGGAACCTCCAAAAGTCGTAGTCGAACCGACAGTAGAGAAAGAACCAGCTGTCAAAGTAGAGTCTGAAAAAACGGAAGAGGAACCTTTGGATGACGAAGCGAAAAGAGAAAAGGCACGGCAGGAACGAGCGGCAAAGAGAGCTGAAAGGCGGGCGCGCTTACGAGAAGCAACTAGTGAAGAATCAGGAGACAAAGGTCAATCAGATTCTAGCGATCGCAGCTCGCGTAGACACGAAGAATCCGACACATCGTCCAGCAAGGATACGGAGGATGGTGGGGACGACTCGTTTGCAAGGAGAAGAGCAGAGCGGCGAGCTCGTCTGGAGCGCAAGAGACAAGAAGCAGAAGCCGAGAAGAATGGAACGTCAATAAGCACGACTAGCGAGACTACCAACGGCGACGAGTCTCGGTCTGCTCGACGGCGCGCAGCAAGATCACACCAGGAAGACTCAACCACTTCAGAAGAAGAGTCCCAGCAATCTAACTACACCGCTTCTGTCAAGGCAAGGTTTGAGAGAAAAGCCAATACGGAATTCACTAAAGAAGAGTCCGAATCTCGCAGTGAACAGACTTCTGCGGCCTCATCCATGGACGAGGGTGATACTAATTACAGCTCCAGGCGGGCTGGCCGAACGCGGGACGAGACTGATCGTGCTACTCCGAGAGCGAAAGCGGACGATGGCCCTTTCCACTTGAAGAGCCGAAACAAGCTCGATACCAAGTCAAGCGATGATAGCAAGCCAGGGTCAGGGTCGGCCTCGCCGCGCCTTGGTCGATTCTCGGCCCCCCCACAGGAGAAGTGTGAAGTGTGTAACAAGACGGTTTATCCGATGGAGCGTCTTGCAGCCGACAAGAAAGTCTACCATAAGTTTTGCTTCAAATGCAACGAGTGCAACAACACCCTCAGACTCGGTAATTACGCCGCCCTGCAAGGAAAGGTTTACTGCAAGCCTCATTTCAAACAGTTATTCAAGGTCAAGGGCAACTATGACGAGGGATTCGGACGAGAACAACACAAGACCCAATGGTCCGCTAAAAGTAACGGGGAAACAAGTGAATCCAGTTAGTAATTGACACTCTGAGCGGCCACAGCAACATTGAGTTTAGGTAGAAAAATAGCAGAAGGGTGCctttaactaacaaaaggtgcTATTGGAAAACCGTGATTAACCATTTTTTCCCAGCGTGGCCCGCTCGCCCGCACTGTTTCTTCCAGCCGGAAAATCGCGAGTTTTACAATAAAACTGTAAAGTTTAGGTAAGTGCACCCTTAAATAGTTTACCAATTGCTTTGCTAAATGCAAGTCATGTACCATTTTTCTAATATTTCCCGTCCTTTGTAGTAATTAGCAGCCATCAATATTCCTACATTTTTTCTGGAAAATTTTCAGGAGTAAgggatttttagttttattgaAACGATATATTGTCGCAAAAGCCCTAAATTACTGCAACGATCAAATCCTATTAAGAACAGACTATAGAGTATGGATTACAATAGGGAAAGGGACTTTGGATACTGAATACTGTCAGATTTACGACAGCCAAAGAAGTCAtttaattttccatttttccaATCAAAATATTCCAAACAAGTCTGAACTACTTAGTTATTAGTGAATTGTCAATTTTAAGTCTTGCCTCGTTTCTTGgatcgatatttttttcacaatctTAGAGATTAACTATTAGTCTCTGATCAATAATGATTAATTGAATGCCATTTCTGTTGCGCAAATTTAATGTagtaaatgataatcaaaagaataaattatTCGAGTAGAATCTACAGTGAATGTTTGTGATGTGAAACTTGAAACATTTTCTGTAAATTATAGCTACTGTTAACTGTTAAGTATGTTACATTAGTAACTCTAGATTTAGCAATAAGGATCGTGATTAGTAATCACGTAAGGTATGGTGGACCTCAAAAAGTCAAAAATGGTAAAATCCCCACCATTAGGTCTTCTCGAAGACCTATTTTATATGCCCTTATTCATAACAATTCCTGGCAGGCAATCGTAGTCCATGGTTACATTAAACAACAACCAGAAGCAAAGAAACATGCTGTGTTCGATTATACATAGTTCATTGCGGTCCTTTCTACCTCGTCTTTGACTGAAGTAAAACTGCGTTGCTTGCAATTCCTGCCAAAGTCCCTAATAAATTGTACATGCCAGAAGGAGCATTTTTAAACAAGAAAAGTAATGACACCTTTTTTTAcccccaaaatatttttgatatACTAAGTAGCAGATGATAAACCAATAAAGTCTTATATAAATTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9BT23	LIM domain-containing protein 2 OS=Homo sapiens OX=9606 GN=LIMD2 PE=1 SV=1
Q1LZA7	LIM domain-containing protein 2 OS=Bos taurus OX=9913 GN=LIMD2 PE=2 SV=1
Q4KM31	LIM domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Limd2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003525 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00412 all species →	LIM	LIM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001781 all species →	Domain	Zinc finger, LIM-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24206 all species →	OS06G0237300 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0015629 all species →	Cellular Component	actin cytoskeleton	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0051017 all species →	Biological Process	actin filament bundle assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_001642071.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_001642071.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

47TPM > 0

16Conditions

81.9Max TPM

55.1Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	63.62	71.51
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	53.76	57.50
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	61.21	63.09
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	61.65	64.04
whole 6 week old aboral regenerate · regenerate uncut	3	3	43.75	47.73
whole 6 week old aboral regenerate · regenerate 4hpa	3	3	54.50	62.12
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	66.65	73.82
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	59.86	66.92
whole 6 week old aboral regenerate · regenerate 24hpa	3	3	52.19	58.02
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	45.93	50.00
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	47.41	50.87
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	68.26	81.89
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	54.15	63.31
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	41.74	63.30
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	54.32	59.03
whole 6 week old aboral regenerate · regenerate 12hpa	3	3	52.42	55.32

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	71.51
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	61.67
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	57.67
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	57.50
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	55.04
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	48.74
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	63.09
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	60.35
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	60.18
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	64.04
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	63.50
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	57.40
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	47.73
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	43.86
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	39.66
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	62.12
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	51.67
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	49.72
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	73.82
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	64.32
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	61.81
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	66.92
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	59.64
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	53.02
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	58.02
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	54.74
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	43.82
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	50.00
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	44.14
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	43.66
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	50.87
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	46.39
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	44.97
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	81.89
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	65.55
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	57.33
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	63.31
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	56.56
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	42.57
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	63.30
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	61.91
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	59.03
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	53.08
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	50.86
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	55.32
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	52.74
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	49.19

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.