Genomic Location: Sc7jCM8_9:335398...358882
NR annotation: XP_020600443.1, low-density lipoprotein receptor-related protein 4-like isoform X2 [Orbicella faveolata]
| CDS | ||||
| LOC110039651 | ||||
| Transcript |
| rna-XM_020744784.1 |
| Protein |
| XP_020600443.1 |
| Uniprot term | Description |
|---|---|
| Q9QYP1 | Low-density lipoprotein receptor-related protein 4 OS=Rattus norvegicus OX=10116 GN=Lrp4 PE=1 SV=2 |
| O75096 | Low-density lipoprotein receptor-related protein 4 OS=Homo sapiens OX=9606 GN=LRP4 PE=1 SV=4 |
| Q8VI56 | Low-density lipoprotein receptor-related protein 4 OS=Mus musculus OX=10090 GN=Lrp4 PE=1 SV=3 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00084 | Sushi | Sushi repeat (SCR repeat) | Domain | Interproscan |
| PF00058 | Ldl_recept_b | Low-density lipoprotein receptor repeat class B | Repeat | Interproscan |
| PF00531 | Death | Death domain | Domain | Interproscan |
| PF14670 | FXa_inhibition | Coagulation Factor Xa inhibitory site | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000436 | Domain | Sushi/SCR/CCP domain | Interproscan |
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR000033 | Repeat | LDLR class B repeat | Interproscan |
| IPR035976 | Homologous_superfamily | Sushi/SCR/CCP superfamily | Interproscan |
| IPR011029 | Homologous_superfamily | Death-like domain superfamily | Interproscan |
| IPR000488 | Domain | Death domain | Interproscan |
| IPR011042 | Homologous_superfamily | Six-bladed beta-propeller, TolB-like | Interproscan |
| IPR050778 | Family | Cueball/EGF/LRP/Nidogen | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0007165 | Biological Process | signal transduction | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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