Gene detail

Detailed information of XP_020600825.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_927:1015645...1018478
NR annotation: XP_020600825.1, tyrosine-protein phosphatase non-receptor type 5-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020745166.1

atctaccaatcattcaaatgaaagttgaaaTTTCAGTAAGCTCCTAGAGCGCAAAGTTGAAAAGTTAGCCTAGAGAAAACTAAAGCTATAACGGGAATCGTATCCATGCCCGGAACGATACTTCTGCAAATGTTTCACCAAACTGAACGGTGACGCAGCTGGGAGTGCCAATTATTACAAGTTTTAATTACATCTGTTAAATTTTGAGGATAGGACATTACCTTTAAGACTTTGAACTAAATCGTATACTGTATATAAAATGCGAACAAACGATGCATATCATAAAAGTAGAGACCACACTTGCATTGTAAATGCGAGGGATAGTATTGCAAATAAAACCATGGTTACTTCAGCATCGTGCACTACCCTTTGTTGATCATGAACGCCTCTCTTTCACCTTTAAGGACCACAAAGGGCAGATATCCTACATAGCTACCCAGCATCCTCTGCATGAGACCACGGAGGATTTCTGGCGAATGGTCTGGGACCAAAAAGCGCATACGGTTGTCATGGTGAACgatgaggaaaaagaaaaaccgGCTGAATTCGTGGATTACCTGCCAAAAGGACAAGGAAACTCAAAGCAATTTGGTGGCATCAATGTTACAGTCAaacaaataacagaaaaagCGGACTACCTTTTGACTGTTCTGAGCATCGTCGAAGGAAAGaaTGCAGCCTCCCCGCGTGAAGTCTCGCACATGAGATTCACGTCGTGGAAGGAGCGCGCCATGCCCAACGTGGCTCTGTTTGTTGCTTTCGTGACAGCCACGAGGGAAGCGAGGAAGAAACATGGCCACACCAAGGCTCCGACCATTGTACACTGCAGTGATGGTCTTGGTTTCAGTGGCGTGTATATCGCTGTGGATATTGGTATAAAAAGCCACGAGGAGAGTAAAACATCAGTTGTTGATGTGTTTGAGTTGTCCAAGAATCTCCGTCATGACCGACATGGCATTGTTTGTACCTTGGAACACTACAACTTTATCTATCAGGTAAGTTATAATTGGCAAATCATGAGCCACATTGGCTCATCTGTGTTTGCGGTAACTCACGATTTCTCAACATGAAATAACAAGGGGTATTGCTAGCAACAtgtatgggatgctagtccgtaGCAGGTAAATGCCCTCCCCCTCCACCCCAGTCGTTTGTTGGGTTGTTCCAACCTTTCACCGGACCGTCCCATTTTAAATATGCGTAAGGGGAGAGAGGTGCTATGAACTACAGTGTAGTGCCTGAGCCGCGACCTAATCATGTACGGCAACTACGGTCAGGACTCAATCCTGGTTTTCTCGTTTAAGAATCCAATTCCCTAACCAGCAGTCCATCAGGACGTTTTTAAGCACGGTTTGCATCACACGTGGTATTCCCTTATATTGGCTCTATAGGTGTGTGTGGCCTCAAAAGCaaggctcgaaaaaagtgccatccagtCGGACCGGATAAGCAGATTTTCCTGCTGTGCAACTAACGTTTCAGTCTTACTTGCCCAACGGTTATGGGCCCAGAcaagtcgtctgccaactaaataagaaaaaaaataaactaagacgtgcccaggacaagcaaaatttgagagctgcttgtccaaaggccaagctggaattcaagttgtTTTCGAGCCTGCAAAGGGTATGGTGTTTTAGcggttttggtctgaaaaagtgtatagattttgaccatttttgtcTGAAATACTTATAGGgtgtgtttttcactctggcttggcattgggtattttgtttagaaggaatttttttttttcttttcgcatGAGCACTGGCAAAGTTTTAgtccttctcaaatgtttacgcAAATGGTAGCCATTTCGGGTTAGCTGCGGTCACATATTAAGCCTTGTAGTAATTTTAGAGGTCCGAAatggggtatggatatttcgctcaggtctgaaaaagggtttggaaaattacagattttggtctgagaTAGGGTACAGGTTTCAAGGTTCGCGCCATACACCTTTGGGAAGTGACCCCCTCCGTGTCTTTTACCACGTATCGTACCATTACAGACTGCGTGTTGACCTCATATTCCTGATGTAAATTACAACCATCGAATGTCACACCATgttaacaccattttgaaaatagcggAAAGTTCGCCCCGATATTTctgattattatacattgaactcattatctcttttctgattggtcgaaa

Protein

Uniprot

Uniprot term	Description
P08575	Receptor-type tyrosine-protein phosphatase C OS=Homo sapiens OX=9606 GN=PTPRC PE=1 SV=3
P04157	Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2
P06800	Receptor-type tyrosine-protein phosphatase C OS=Mus musculus OX=10090 GN=Ptprc PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00102	Y_phosphatase	Protein-tyrosine phosphatase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR000242	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR050348	Family	Protein-Tyrosine Phosphatase	Interproscan
IPR000387	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR003595	Domain	Protein-tyrosine phosphatase, catalytic	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19134	RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004725	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0016311	Biological Process	dephosphorylation	Interproscan