Detailed information of XP_020601019.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_954:349694...366786
NR annotation: XP_020601019.1, semaphorin-5B-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q24323Semaphorin-2A OS=Drosophila melanogaster OX=7227 GN=Sema2a PE=1 SV=2
Q64151Semaphorin-4C OS=Mus musculus OX=10090 GN=Sema4c PE=1 SV=1
Q9NPR2Semaphorin-4B OS=Homo sapiens OX=9606 GN=SEMA4B PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF01403SemaSema domainRepeatInterproscan
PF01437PSIPlexin repeatFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR036352Homologous_superfamilySema domain superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001627DomainSema domainInterproscan
IPR027231FamilySemaphorinInterproscan
IPR016201DomainPSI domainInterproscan
IPR002165RepeatPlexin repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11036SEMAPHORINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0001755Biological Processneural crest cell migrationInterproscan
GO:0030215Molecular Functionsemaphorin receptor bindingInterproscan
GO:0030335Biological Processpositive regulation of cell migrationInterproscan
GO:0045499Molecular Functionchemorepellent activityInterproscan
GO:0048843Biological Processnegative regulation of axon extension involved in axon guidanceInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06841SEMA5; semaphorin 5-Axon guidanceko04360deepkoala

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