Gene detail

Detailed information of XP_020601493.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_1281:483638...488339
NR annotation: XP_020601493.1, uncharacterized protein LOC110040584 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020745834.1

atgtgcaaagagtacagccattgttctgctcattagtccttttgtttagtgacatTCCCGTAAAGGCCTCCAGGCAAGTTGTACCATACATGGACACGCTTGACTACTTTGATCGttttttgttataataaactaAAAGTGAAACACTCCATCGAACTTTACGACAACCTTCAACAAAACTCAGTTGCTATCACATGTATTATCCATGTTTACTGGCATTATAAAACGGTATTGTATCTTCAAAGAAACAGCTGCGATATTCTTATATGTTAATTGAAAATGTAAAGTACTGATAACTAGTCAATTAAGTCCATCTTTTCTTGCACTTATTATTACCACCGCTAATACTTGTGTTGTAAGGAATGTCCTTGATGTAATTTCTTCACTTAGACATTTACTACTACGAAGTTTTGGAAGTTAATTATAAGGAACTCTTCTGTTctgttaaagaaaaacaaagcaaatacatATGTTTCTAGCTGGTTGAATCTCTATGCTGACTGTTTAGTGCTAAAGATGTACAAATGCTATATTTGAAGTTTACGAGCCCGGTGATCTACAGCTGCCAAATTTAAACCCAGCTTCTGTACACGGAGCGACTATGGGTATTCCACcctgggatgctagtccatttttttaagtttgttatccgtttatacacctgagtgaaGAGATACAAAGCGAAAATCAAGTATATTGCCCATGAACACAATGACTCCAGCCAGCGATTGAGCTTCAGGATCCCACGCGCTCATTATTAGTACTATGTCTATGTCACTGCTTCTCCCACGGAGGTAAGAGTAGGAATCTGCAATCTTTCATTATCAAATCCAAGTGTTCTTGTAGCTTCATTAAACGGCGAATATGGGCAGCAGGTACTCTTGTTACAAAATGCACCAGTCCCTTTTCAGGCCTTGATTGCATGTACAAACTTGTAGGTTCAAGAAAATGAATACTCGTACTGTACTTCTACGTAACGTTAATTTGGCCACCAGCCTTTGTCCCTGCTGTGACACTTTAAAGCCACTGTACAGGCAGTAGGACAAACTGTTCACTGTTGAATACAAAAATCGTGTGCTTTGCTCATTCAACTGCTAAATGTACATATtccaatttaattatttttgatcTGTACTGTGTAGACATTTATAGTGAAAGCTGAATAACAAGACCGGAAGAAAATTTCGAGGTGTGATGTCAACTGCTCTTGTTAAATTTGACTCGTTGCTGATGCTATTGACAGTGGAGACGAGAGAATTCAACTTGATGGCACTCAGGTGACCGACACTTGATGATGATTACCCTCACGACAAAGGTTCTCGGAATTCAGTTAGCTGTATCAGTAAATAACATATAATCCACAATTTGTATCATTTCTGAGAAATGAATAAAGGAAGTTAAACTGGGCAAAATAACAAAGATGCTTTTTTGTGATCGTGATTCCGTTGTCTCAGCAACGTGCCCTCTACGTGCCTGTGCCCTCTACGCCTCGCTCAAAAGGTGGAATTTATGAAAAGGAAAGTAGCCTATTCAGGTATATTAAATTACATATAGGCGTTCGAGTGAGCGATCGACGTTGTTTACTCGGCAAGACTCGAAAATGAAAGCAACATGGCTCTCAGGAAACCTTCCGATGCTACATTTGAAGCTAAACATCACTTCTTCGAATGGTGTCGTCAGAACAACAAAACGAAGTTTTCTCTTCTCATCACAGGTAAAACTGGCGTCGGTAAATCAAGTCTTGTGAATGCTCTCGTTGGCAAACAAGTGGCTGGACAAAGGTTTCAGACAGCTGACAAAGTTATTCCCTACGATGTGGAACACTTAGAAGGTGTGAAAGTTGACGTGTGGGATTCTCCGGGGCTAAtagatgacaatgatgatgacgaaggTGGCGCAGGTAAAGAAAAAGAGTACCTGGCGAAAATAGAAAGCGAAATAACAGAAGAGCTCGATGTGGTGATCCTCTGTCTCAAAATGGACGACAAGCGCTTTCATCGCGACGACAAGGACACATTCAAAATATTGACAGAAACGTTTGGAAAGAAACTGTGGAAGAACGCTGTGATAGCTCTAACTTTTGCCAATAAAGTCGAAGATCCAGCTGGGGGCAACAGAGAGGACTACTTTGAACACGACCTAGCAAACTGGCGAGAGGCGATACATACATTCCTCAGCAACACGCTCAAACTCGACCCTGAGCTGGTGCAATCCTTGCCATTAGTACCAACTGGATATTACCGACCAGTCTCCGTCCTACCCAATCGTATAAACTGGTTATCAGACTTCTGGAAAGCGTGCAGCAATGTTGCAGGGAATTCCGCTCCTTTCAGATTGACCCGACTCAAAAAGGACGAAGAGCAACCAGATTCGTTTTGGAAGAAGACATGGGGGACGTTTAAGGAgtatttttgtgcttttttttcgCAAGTTTACTGGAAGATTCGTGCTTTTGTTTCGCAAGTTTACAGGACGATTCGCGACGTGATCAACACAATTTTTAACGGCTAAGTTAAAAGTAATTCACTTGTATCGCAGCAGTTAGTATTGTATATTTTAAGATACATATTTTTGATTATCTCCCTATTACTACCCTTGAACGAGTCTAGGAAAAAGCTTCCAGGCAAACAGTTCCAGCGTGATTGATATtataaactaaaagaaacattCCCTTCTTTGTACTCCCTAGTGATACTATATAACGAGTCTAGAAAAAGGCCTCCAGGCATGCCGTTCCAGACTCGACTCGCTTGACTactttgattgtttttggtTAGACTAAACTAAAAGAGAAACATTCCCTCAAACTATAAAGACAACCAAGAACAAAACTCAGTTGCTCTAACATGTATTATCCATCGTCTACTGGCATTAGAAAGGAGTAGAATATCCCGAAGAGAAACAGCTGCGTGACCATACGATATTTTTAGACGTAAATATAAAATGTACAGGACAGAGAATTGCTAAGCTAAAGTTTGTTACAATGATTCTACTTTTAATTAGTACTGCTAATTATTGTGTTGTAAGTAATGTCCTTGGTAGAACAACACGTCAACATTTCCTACCATGACTGTTTTAAAGTTTATAAGGAACTTTCCTGTTATGCTACATACTTTGATTGAGAGTAATTTTgctctctttttctgtttatttacttcgtatacatgtacattcaagAAGAAAAAGGCGAATTCCAATGTTTCTAGCCGGTTTAATCTTTACGTTGTGTTATTCTTTCGTTACGAATATCTGTGCGTACACCAGATGTCAATGTTGCACTGGCATGCCAAGGAGCTTATGCTCATTTGCTTTGATGTTTCCACTTCTAAAGAACAAATTTCCGTTTCGATACGAATTCTGttatcagaaaaaaacaaacgaagtTTTCTCTTCTCATCACGGGCAAATCTGGCGTCGGTAAATCAAGTCTTGTGAATTCTCTTGTTGGCAAACAAGTAGCTGAGGAAGGGGGCAAAAAAAGCCCCTGCACATACGAAGTTACTTCATACAGTGTAGCCATTGAACGTGTGGACATTCGCGTCTGGGATTCTCCGGGGCTATAAGATGATACAGGTAAAGACGAAGAGTACCTGTCGGAAATATAACGCAAAGTAACAGAGGAGCTCGACCTTGTGATTTTCTGTGTCAACATGGACGACACGCGATTAAATCGCGACAAGGAGACATTCAAAATATTGGCAAAACAGTTTGGAAAGGATCTTTGGAAGAACGCTGTGATGGCTCTAACCTTTGCTAATAAAGTCGAAGATCAAGATGGGGGCGACAGAAAAGCCTACTTTATGCAGGAGCTTGCAAATTGGCGAGAGGCGATACATTCATTCCTCAACGACACGCTCAAACTCGACCCTAAGCTGGTGCAATCCCTGCCATTAGTACCAACTGGATATTATTGAAAGGTCTCTGTCCTACCCAATGGTGGAGAGTGGCTATCCGACTTTTGGATCGCCTGCTACAGCGCTGCAAAAAGTTCCGCAGCTTTCAACTTGTATCGAGCGAACAAGGCCCGAGTAACATTTCCTGGGAGTGGAAAGGTGGCTGCTATCTGTGATGGATCCGAAGTGGCTCATACATCTCCGGACGCTGATGACTCCGTGATATATCCGAGATTGACTTAGACGAAGAGCAACAAGAGTCGTTTTGGAAGACGACATGGGAGTGGTTCAAGGAACATTGTTTAAGTGCTGGTGCAGGTTTGAGTGCGCTTAGCACCGGGTTCGCAATTCTTAAGATACTTATGAAGGAATACATAGCTAATACATGTAGGTACGTACACTTATTACAGCTGAGTTAAAAGTAATTCACTGGTGTCGCAGCAGTTATTGTTGTCTGTTTGATGAGAAATCTTTGTAACTCTTTTacttctctttctttgtttgtattACAATATGTTTtctaagaatatcgaggctgagattttgaaaagaatataatccTGTGTGTTGAAAAGTCACAAGTGCAaaacaattatatgttttaactaaaccgtacaaaatttttcctttctctaaacggcaaaactaggtAAATAGCAACAAAAATAGCACTAGCCGTGTGGTCGATACTAATAACATGTCTGCGAGAGGTTACGTGTGTTTTAATGGCTGCAGGCCGGCTCCAGatttactttaacaccatccagacaccaaatacattcgaaaacagaaacgTCAAACGCTATTac

Protein

Uniprot

Uniprot term	Description
A8HYJ1	Translocase of chloroplast 34 homolog, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=TOC34 PE=1 SV=1
A9SY65	Translocase of chloroplast 108, chloroplastic OS=Physcomitrium patens OX=3218 GN=TOC108 PE=3 SV=1
Q9LUS2	Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC120 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04548	AIG1	AIG1 family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045058	Family	GTPase GIMA/IAN/Toc	Interproscan
IPR006703	Domain	AIG1-type guanine nucleotide-binding (G) domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10903	GTPASE, IMAP FAMILY MEMBER-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005525	Molecular Function	GTP binding	Interproscan