Genomic Location: Sc7jCM8_1281:1192707...1245061
NR annotation: XP_020601539.1, neurogenic locus Notch protein-like isoform X3 [Orbicella faveolata]
| CDS | ||||
| LOC110040616 | ||||
| Transcript |
| rna-XM_020745880.1 |
| Protein |
| XP_020601539.1 |
| Uniprot term | Description |
|---|---|
| P58397 | A disintegrin and metalloproteinase with thrombospondin motifs 12 OS=Homo sapiens OX=9606 GN=ADAMTS12 PE=1 SV=2 |
| Q811B3 | A disintegrin and metalloproteinase with thrombospondin motifs 12 OS=Mus musculus OX=10090 GN=Adamts12 PE=2 SV=2 |
| Q8TE60 | A disintegrin and metalloproteinase with thrombospondin motifs 18 OS=Homo sapiens OX=9606 GN=ADAMTS18 PE=1 SV=3 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01562 | Pep_M12B_propep | Reprolysin family propeptide | Family | Interproscan |
| PF01421 | Reprolysin | Reprolysin (M12B) family zinc metalloprotease | Domain | Interproscan |
| PF00090 | TSP_1 | Thrombospondin type 1 domain | Domain | Interproscan |
| PF00008 | EGF | EGF-like domain | Domain | Interproscan |
| PF19030 | TSP1_ADAMTS | Thrombospondin type 1 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR000884 | Repeat | Thrombospondin type-1 (TSP1) repeat | Interproscan |
| IPR024079 | Homologous_superfamily | Metallopeptidase, catalytic domain superfamily | Interproscan |
| IPR001590 | Domain | Peptidase M12B, ADAM/reprolysin | Interproscan |
| IPR036383 | Homologous_superfamily | Thrombospondin type-1 (TSP1) repeat superfamily | Interproscan |
| IPR002870 | Domain | Peptidase M12B, propeptide | Interproscan |
| IPR051830 | Family | Neurogenic locus notch homolog | Interproscan |
| IPR001881 | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR013273 | Family | ADAMTS/ADAMTS-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24033 | EGF-LIKE DOMAIN-CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0008237 | Molecular Function | metallopeptidase activity | Interproscan |
| GO:0004222 | Molecular Function | metalloendopeptidase activity | Interproscan |
| GO:0006508 | Biological Process | proteolysis | Interproscan |
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0030198 | Biological Process | extracellular matrix organization | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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