Detailed information of XP_020601541.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_1281:1192707...1245068
NR annotation: XP_020601541.1, uncharacterized protein LOC110040616 isoform X5 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P58397A disintegrin and metalloproteinase with thrombospondin motifs 12 OS=Homo sapiens OX=9606 GN=ADAMTS12 PE=1 SV=2
Q811B3A disintegrin and metalloproteinase with thrombospondin motifs 12 OS=Mus musculus OX=10090 GN=Adamts12 PE=2 SV=2
Q8TE60A disintegrin and metalloproteinase with thrombospondin motifs 18 OS=Homo sapiens OX=9606 GN=ADAMTS18 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01421ReprolysinReprolysin (M12B) family zinc metalloprotease DomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF01562Pep_M12B_propepReprolysin family propeptideFamilyInterproscan
PF19030TSP1_ADAMTSThrombospondin type 1 domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR001590DomainPeptidase M12B, ADAM/reprolysinInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR051022FamilyNotch Signaling and Cell Fate DeterminationInterproscan
IPR013273FamilyADAMTS/ADAMTS-likeInterproscan
IPR002870DomainPeptidase M12B, propeptideInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24049CRUMBS FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007157Biological Processheterophilic cell-cell adhesion via plasma membrane cell adhesion moleculesInterproscan
GO:0032991Cellular Componentprotein-containing complexInterproscan
GO:0045197Biological Processestablishment or maintenance of epithelial cell apical/basal polarityInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan

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