Detailed information of XP_020602605.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_1399:1446146...1518035
NR annotation: XP_020602605.1, vacuolar protein sorting-associated protein 13D-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5THJ4Intermembrane lipid transfer protein VPS13D OS=Homo sapiens OX=9606 GN=VPS13D PE=1 SV=2
Q9VU08Intermembrane lipid transfer protein Vps13D OS=Drosophila melanogaster OX=7227 GN=Vps13D PE=1 SV=3
G0S3B8Intermembrane lipid transfer protein VPS13 OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) OX=759272 GN=VPS13 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16908VPS13_ext_choreinVacuolar sorting-associated protein 13, extended-choreinRepeatInterproscan
PF06650VPS13_VABVacuolar-sorting associated protein 13, adaptor binding domainDomainInterproscan
PF16910VPS13_mid_rptVPS13, central RBG modulesRepeatInterproscan
PF16909VPS13_DH-likeVacuolar-sorting-associated 13 protein, DH-like domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031646DomainVacuolar protein sorting-associated protein 13, extended choreinInterproscan
IPR009543DomainVacuolar protein sorting-associated protein 13, VPS13 adaptor binding domainInterproscan
IPR026847FamilyVacuolar protein sorting-associated protein 13Interproscan
IPR031642DomainVPS13, middle RBG modulesInterproscan
IPR031645DomainVacuolar protein sorting-associated protein 13, DH-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006623Biological Processprotein targeting to vacuoleInterproscan
GO:0007005Biological Processmitochondrion organizationInterproscan
GO:0019898Cellular Componentextrinsic component of membraneInterproscan
GO:0045053Biological Processprotein retention in Golgi apparatusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19527VPS13D; vacuolar protein sorting-associated protein 13D-Membrane traffickingko04131deepkoala

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