Gene detail

Detailed information of XP_020602760.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_1399:2444298...2447151
NR annotation: XP_020602760.1, fibropellin-3-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P04155	Trefoil factor 1 OS=Homo sapiens OX=9606 GN=TFF1 PE=1 SV=1
Q8TER0	Sushi, nidogen and EGF-like domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SNED1 PE=1 SV=2
Q70E20	Sushi, nidogen and EGF-like domain-containing protein 1 OS=Mus musculus OX=10090 GN=Sned1 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF12661	hEGF	Human growth factor-like EGF	Domain	Interproscan
PF00088	Trefoil	Trefoil (P-type) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR000519	Domain	P-type trefoil domain	Interproscan
IPR050906	Family	Notch signaling pathway	Interproscan
IPR013032	Conserved_site	EGF-like, conserved site	Interproscan
IPR044913	Homologous_superfamily	P-type trefoil domain superfamily	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR017994	Family	P-type trefoil, chordata	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24044	NOTCH LIGAND FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005112	Molecular Function	Notch binding	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan