Gene detail

Detailed information of XP_020602828.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_1416:674530...688046
NR annotation: XP_020602828.1, N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020747169.1

CTGCAAGTAGACAACTGTAGGCGCAGAAGATATTGTGCAAACTTCGAAACTTGAACAAACTAGTGCACTAAGAAATGAAGGTGctaatttatttttctattacTTTTCTCCCAATTCTAGCTTTGACATATACATCACGTGAAGAAAGAGACGACTACTTCCCGGACGATATCCTTACCCCATATGGAGATCACCTCAGAACCAAACGCAATCACAGATATGTTCGAGACTGCCAGCCAGTGGAATTTGGAAATACTACTCATGAAACTTTCAAGGTATCCACCCGTCTAACATCGGGACAACCTTTTGTACAGGTGCATAATTTATATCATGAATTTACGAAAAATTTCCAGACTTTGAACGTTGTTGGACACGTTGTAACAATAGAGGACCCTTTCCGAACGTTTTCGGTTCTAGAACCGAAGCTAATTGGGGGTTGCAATACATCAACAAGATCAACAGTCTCAGAATCTGCTAGACAGCGGAAATGCTGGGTATCTACAAATGCAGGGTATTTTAGAACTCGAGACGGTAAGTGTTATGGAAATGTCTTCAGCGATGGACGAAAGGTTATGGATTCAGGCGGTgtccaaaatgcaaatttcgGTATTCGACAGGATGGTACACTTGTTGTGGGATATTTGTCCAAGGAAATGGTCGACCAGAAAGAGAATCCATTCACTCAGCTCGTCTCGGGAGTGATTTGGTTATTACGGAATGGCTCGAGTTATGTGGACGAAAGCAAGAAAGCAGAATGTCGTGACGTGGAGGAAACAGGCTCGATGGACTTGTTTGCAGATGTTGTGTCCGCGAGAACCGCATTAGGACACGATAAACATGGGCGAGTGATGATTGTTCAAATTGATGGGAAAACCCACCACAGAGGGATTGATCTTTACAATTTTGCCAACTTCCTGTTGAAGCTTGGCTTAGTGAATGCTATTAACCTTGATGGTGGAGGTTCAGCAACAATGGTAGTAAATAACACTGTTATTAACTACCCATCTGACGAATGTGGGGAGTTCACATGCTCAAGAGATGTGTCCACAATTGTGTGTGCTCATGAACCTGACTGTGTGTCTAAGGATTGTAATGGTCATGGACAGTGTGTGATGGGCCAATGTCTCTGTGACAGTCACTGGACAGGAGATTCTTGCGATGTTTTAAAATGTCAACAGCATAATTGCTCTTCAAATGGACAATGCTCTGCAGAAGATGGTTGCTTGTGTTTTCCTGGTTGGAAAGGAGAGAATTGTAGTGAAGCTTGTCCTTTGGGATTCTTTGGATTGAACTGCAGCAGGGAGTGTCATTGTGAGAATGGTGGAGTGTGTGACCCACTGGATGGACATTGTATTTGCACTCCAGGATGGATGGGAACATTCTGTCAGCAGCGGTGTTTCCATGGTTCTTATGGACAGAACTGTTCAAACATTTGCAAGTGTCCTAATACCTGTGACTGTGATCCAGAAACTGGCGAGTGTCCCACAGACAACAACGACACTATGCTGAATACTACTCAGAGATggcTGCAATGCAAGTTAGATTCAAAGATGAAAGTAATCTCACTGAAGGCCAATGTAAGGCAAACCAACAATGCAAAAGCATCAGATGTGGCCGAAAAAGAATTCAGTAAgctgtttgtttggtttgtggCAGTGATCAGTCTCTGTGGGATCAGCTTATTAGCTAATCTCTTTCTGATATACCTGGCATGTAATCAAGCCACAAGGAGGGCTGTCTGGAAATACAGGAGAGGAGAACAAGAGCTTCTTTTTAGtggcgatgatgatgatgacgctTTGTGATAAAGTGCCAATAACATTATTAATGTTACAATATGTCAATTATGGTAGCAGTTAAAATGTGCTGCCAATTCCTATCTTTACTtgataaaattacttttaacCAGTAGTACAGTCCTGCTATCTTGAACTCTTAAGGGAATGAGGGTGGTGAATGGTTAATGCAAGACTTTGCAAGAAGGTAAGACTGGACCTTACCaagactttaaagtgttttaaatgtaaACCCAAGACATTCAGACAtcatttgtaaaataaaaaacaaaactggtacgctgagactttcttagccttgctAAAAATCGAGAAGGTGAGAtgctttgtgaaaaaatcttGACTGTGAGAGGCACATAACCACTAAAAAAGAAAGACTGTGAGACCtgtgaaatgcaatgaaaattttGGGAGACCCATTAATGGCCCAGTAACCCCTCTTAACGTTAGTTCCAGATGTTGGGGCTAATTCCTATCTTTATAGTGTTAGTCAATAGTACAGTCAACTCATACCTTGTCAAACTCttagagaaacaagaaaaagtttgAGATGTTGGGGGTGCGAGATAGGTAATAATCAAGTGAAGCCTTGGAACCGACTGGCTCATAGTtgccgaagcttatcccggtttctgtagcatcaagcggctaggagtatttctactccccctggatgggatgctagtccat

Protein

Uniprot

Uniprot term	Description
P68827	N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase OS=Bos taurus OX=9913 GN=NAGPA PE=1 SV=2
Q8BJ48	N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase OS=Mus musculus OX=10090 GN=Nagpa PE=1 SV=2
Q9UK23	N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase OS=Homo sapiens OX=9606 GN=NAGPA PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09992	NAGPA	Phosphodiester glycosidase	Domain	Interproscan
PF07974	EGF_2	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR018711	Domain	Phosphodiester glycosidase	Interproscan
IPR013111	Domain	EGF-like domain, extracellular	Interproscan
IPR001774	Domain	Delta/Serrate/lag-2 (DSL) protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR40446	N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0033299	Biological Process	secretion of lysosomal enzymes	Interproscan
GO:0007154	Biological Process	cell communication	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01125	NAGPA; N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase	EC:3.1.4.45	Lysosome	ko04142	deepkoala