Detailed information of XP_020602885.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_1416:1222797...1225318
NR annotation: XP_020602885.1, E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5ZMD4Tripartite motif-containing protein 59 OS=Gallus gallus OX=9031 GN=TRIM59 PE=2 SV=1
Q503I2Tripartite motif-containing 13 OS=Danio rerio OX=7955 GN=trim13 PE=2 SV=1
Q56R14E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis OX=8355 GN=trim33 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01436NHLNHL repeatRepeatInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR001258RepeatNHL repeatInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10680PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12035TRIM71; tripartite motif-containing protein 71EC:2.3.2.27
Ubiquitin systemko04121deepkoala

TOP