Gene detail

Detailed information of XP_020603231.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_1460:384454...390932
NR annotation: XP_020603231.1, AP-1 complex subunit sigma-2-like, partial [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P56377	AP-1 complex subunit sigma-2 OS=Homo sapiens OX=9606 GN=AP1S2 PE=1 SV=1
Q1JQ98	AP-1 complex subunit sigma-1A OS=Bos taurus OX=9913 GN=AP1S1 PE=2 SV=1
P61966	AP-1 complex subunit sigma-1A OS=Homo sapiens OX=9606 GN=AP1S1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01217	Clat_adaptor_s	Clathrin adaptor complex small chain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022775	Domain	AP complex, mu/sigma subunit	Interproscan
IPR011012	Homologous_superfamily	Longin-like domain superfamily	Interproscan
IPR016635	Family	Adaptor protein complex, sigma subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11753	ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015031	Biological Process	protein transport	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan
GO:0043231	Cellular Component	intracellular membrane-bounded organelle	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12394	AP1S1_2; AP-1 complex subunit sigma 1/2	-	Membrane trafficking	ko04131	deepkoala