Gene detail

Detailed information of XP_020603743.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_1047:49223...51397
NR annotation: XP_020603743.1, E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020748084.1

AAATGATCCAAGCGGTTGAGTTTACCCAAATTCTGGTTCAGAGAAGCTCAAGCTCAGATATCATGCAAAGCAAGGAAACTCTCAAACACAGATTTCAAGAGCTTCGTGACATTGAAATGCCGAAACACCACGAGACCTCATTCATCAAATTCACCCCGGCTTCTGTGGAGGGCTTGAGACTGGGCGATATCGCAATCGAGAGAGTTGATGCAAGTCAATGCACTTTGGAGGGACTGGATCAAATTCTTCAGGCTGGTGTAGCAGCAGAATTGATATCATGCCCCAGAACACCTGAGGGAGAGATAAGTAACCTGCCTGATCTTAAAAATCAAATTGACATAGTCATTGAACCTGCTGAAGACGTCACAAATGTGATTGTTAGCAAAAAGGCTGAAAATGATAAATTCAAGGTGAATTTTACACCAAAAGTGCCGGGTGCCTATAACATTGAAGTGAAGATCAACGACGATAAACTTCCAAACTGCCCTTTCACTACGCAAGTCAAAGAACGTGAACTTGGTGTAGTCGGTgagttgaacttgaagttatttcAAGGAGATGAGCTTAACAATCTATGTGGAATTGCTGTAAATACGACAGGGAAAATTGCTATATCAGATTTTACAGGACATTGTGTTTATATCTTCGATCAAGAAGGCAactgtgtaaaaaaaattggcagCCAAGGACGAAATGCCGAACAATTTCACCAGCCATGGggcgttacatatttaaatGATAACGAGATTCTGGTTGCGGATCAAGGGAATCAGAGAATACAACAAGTAGATGTCCAGACAGGAACTGTTGTAAAAAGCTTTGGAAAATATGGCGCAGCAAAAGGAGAGTTTTCCAACCCGGTTTATGTTTGCCTGGATGAACATCACCGCATTGTTGTAACCGAGTGGGGCAATCATAGGATACAGGTCATGACACAAGAGGGTGAGACTATTACCATGTTTGGAGACAGCGGCGCAGAGAAACTCAATGATCCCACAAGCTGCATTCCTTACAAAAACATGTTTCTTGTAGCTGATAGAAACAATAACTGTATTAAAGTTTTCAATCGGTCAGGAACTTTCTTATACAAGTTTGGAAAACAAGGAAGTCAAGATGGACAATTTCAGTGGCCGCATGGTATGCTTCTAGACAGCTCCAATAATCTTCTTGTATGTGATGCGTGCAATAACCGGGTTCAGCAGTTTTCTTTAGACGGTCGCTTCACAGGCAAAACTATCACTGATTTACCAAATCCTGTTGGAATAGCAACAGCGCCAGATGGACGTATTCTCGTGACTAGCTTTAAAACTAAGAAAGTCTACATACTGAAGTAGATAATTTATTTGTCAGTACGTGTAGTTTGTAACCAACCGCTCTCTCTGATATCAATAGCACAACTGGCTGATGCATCTCTTAGTATCTCCATTCAAATATCTCAATTTTCATTCATATCCGTAATGTTTCGTTGATTTTTGGGGCGGTATGAACTTTCCAGTCATCCAGTCTGGTGGAAACTTTCTTTATTCCTGATCTTGTATCTCGGTTTCACTCAAAAAACCAACAGGATTTCCCTTGatttaaagtttgagatttAAATTGGTATTTCTCGCTTCCATTTGTTTCCACAAATCAAGATACTAATATCTTGCTATTGCAATGAAACCGGGCTGGCAAAACATTGTACGAGGACATATTTATGTGCTTTCTCTAAGCAAGAGGAAGTGTaataatttgagtgaaaatatttttttgttgttttacaattttattacgGATGACGAAGCCCGGGGACGAAGCTTGTagttttgtccatgattgttcTTCCAAATGCGTTACCCAGGCTCtgttcaaaaaaagaaacaagaaaaacaagaaaaaaaaaaaaaagaaacgaatttGTTCCTAGCTTTTCATTGGCGAGAAAATAGTTTGTTCTTCGAAACAAACCTAGCAAGGGAGGCGGGGGAGGCTTCCTAGCTGCCGAAGCTTccgggtgttttttttttttaattttttttttcagtttccagaAACGTATTGAAGAAGTTACTGGCGAGTGCCAGTAAtgctgcttttttttaaaaaatcttgcCAAATCTTAGACGGATAATTGAACtaaaggtggctccctatagttttacgatcgcacgcgcgctgaggatgaaagctcaagta

Protein

Uniprot

Uniprot term	Description
M9PH32	Protein meiotic P26 OS=Drosophila melanogaster OX=7227 GN=mei-P26 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01436	NHL	NHL repeat	Repeat	Interproscan
PF17170	DUF5128	6-bladed beta-propeller	Repeat	Interproscan
PF00630	Filamin	Filamin/ABP280 repeat	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001258	Repeat	NHL repeat	Interproscan
IPR001298	Repeat	Filamin/ABP280 repeat	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR017868	Repeat	Filamin/ABP280 repeat-like	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR011042	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10680	PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan