Gene detail

Detailed information of XP_020605660.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_1624:50002...54177
NR annotation: XP_020605660.1, uncharacterized protein LOC110044452 isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020750001.1

acttttcgggaccttcgagaaacgggccccaggactCTACCCGTACCCCCAGGAATTGTAGGAAAAGGCAAAAATCCCAAGGAATGGGGCTGAGTTTTGGTTTCTTCTTTCTTACAGCCGACCGAGTCCACCTAAGGCGAACCTTAGGTTCAAtcaccagccgctgttcgggaaaggagcccgcgctcctcccctgGACGCAGaccagacacgagagagcggcggaaatggAGCCTATGAACAAGCTCCTAAATTCCTGGTCATGAAGCGACCAGAGCTATTAAACAGAGAGCGTGTTCACAGGTTAACTTTCTTTCAGATGACGATGCTCTTTGTTGCAGTTTACAAGGGATGTGAAATTGTTGTTTCATACGTGGGTTGAATGGATCACAACTTCGCATGGCGACAGTCAGAGGTTCAAAGTCAAGAAATGAAACCAAATTGAACATAACTCTGGCCTCAGATGATGAGGGTTGGAACAGAACTGTGAATGGGCAACTAGTAATTGAATTAGGCAGGAATACCAGATTGAACGTGACAGGATTTGTACCTAAAAACACCCATCAACAGAGAGAACATGCCAGGAGTTTAAATATTGAGCTTGTTGATGCAAAGGATCACACAGGATTTTCCTCATCAGAGCTGCTCTCTTTCCCCCCTGAGAGTCTTGAAATTGACATTCTATTGATTCATGCTCATGGGCAAGACCTTGGGCGGCAGGCGCAAAGTATAAAGGAAGCCAAGAAATGTAAGTGGGTGCAGGTTGTACACACAGACAGTCATTGGGAAGAACTTTATGAAGGACAACCTAGACTTCAGACATTGTGTGAAAAGGCTGATTTTATAATTACAGTTGGTCCAAAAGTTGCAGACACTTGCAAACGTGCTCTGCGCTCCTCTGAAAAGCATGTCTTTGACTTAACACCGGGTGTTTTTGAAGACCTAAGTGGTGTTCGTCAGTTGTATGGAGATTTGAGtacatttcatgttttgttgAGTGGCtcatcaaaatattttaaactcaaAGGATGTGACATTGCAGCTAAAGCAATCAAGTTACTAAATACACCATCAGCATCTTATCACCTTACAGTTAATGTGAAGCCCTGCGACAATCCAGAAGAGGTAAGAAAGGCCTTACTCGGTGAGGGCCTTGACTCTCGTCAACTCACTGTAAGAGTGTCTGATAGCCATGACGATTGGCGCAAAATGCTCTGTGAAGCAGATCTTGCTATTAAACCATCAAGAAATGAAGGTTTTGGAATCAGTGGTCTTCTTGCTATTTCAGCAAACTTACCTGTTCTCGTAAGTGAATACAGCGGACTTGGTATTGCCCTTAAGAATATACCACTTAGAAATAGCAGTGTTGTGGCTTCTGATGACCCTGAGGTGTGGGCTGACAGGATAAAGCAGATCAGAGCAAAGACCTCAGAAATCCGCCATGCAGAAGCTGTGAAACTGAGAGAAGCATACATGCAGCAGTTCAGTTGGAAGGATCAGTGTGACAAACTGGTGGAGGAATTGTTCAGGATAGTCCCACAAGAGTGTGGTATGTACATGTTCTGAGTTCAATGTGTAAGACCTGATGGTAAGGTTGTCAATACCAACTGTAATATTGTAGGTGGTGTCAGGAATTTCACATGTTGATAGATATATTTTGGCAgtgtagactgttcacagccctctgttTTTATTCAATCATTGAACGTGCAGATAGAATCACAAGAGATCTGGACGCCAGTGCAAAGCagaagacttgactgggtaggggtGGGGACTGACATATATAGAGAgactgtagacatctttggaaaaagtGAATTCCCCGTTTCtccagaaacaaaaaattccCATTGGTTGAAAGGCAACAATAGTGTCATCACCTTGACAATGGCTGATCATGATTGGGTCCAGACTGTTTTTGCGGCTtgcaacaataattattgtcatcACTGACACATGCCATGATTTGTATTGAAGCggttatttttaaaatagaatactgttaagagaaatttcaacatttcttcACTCAAAGGTGAACAGAAAGAGGCTACTGTTCATCTTCTTCAGTCAAAAGACATTGTTGCAATTTTGCTGACCAGCTTTGAAGAAAGTCTGATGTATCAACTCTGCgcaacagcaaaagaaatgcaaatggtGTGAATATTGTTGTTCTCATTGTTTTGCCACTCAAAAGCATCATGAAAGATCAAATAGAAGAGATGGAAGAGCTTAGGATTCCTTACATCATTTTTGTCAACTAAGGACAACTGCTTCTGCTGATTGGAGAAGCGAAATACAAGCTTGTTTTCGGAAAACAGCTGAAGAGATTTTGTatgcaacattttaaaacatgttaTAGAACAGAGATTCTCTGCTCATTGTAGTTGACGAGTGC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20706	GT4-conflict	Family 4 Glycosyltransferase in conflict systems	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
-	-	-	-

PANTHER

PANTHER term	Description	Source
PTHR46401	GLYCOSYLTRANSFERASE WBBK-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009103	Biological Process	lipopolysaccharide biosynthetic process	Interproscan
GO:0016757	Molecular Function	glycosyltransferase activity	Interproscan