Detailed information of XP_020606089.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_1661:1698437...1761784
NR annotation: XP_020606089.1, uncharacterized protein LOC110044851 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
M9NDE3Protein bark beetle OS=Drosophila melanogaster OX=7227 GN=bark PE=1 SV=1
G5EDK5Cadherin EGF LAG seven-pass G-type receptor fmi-1 OS=Caenorhabditis elegans OX=6239 GN=fmi-1 PE=1 SV=1
Q9R0M0Cadherin EGF LAG seven-pass G-type receptor 2 OS=Mus musculus OX=10090 GN=Celsr2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028CadherinCadherin domainDomainInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF07974EGF_2EGF-like domainDomainInterproscan
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR001190DomainSRCR domainInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR000998DomainMAM domainInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR013111DomainEGF-like domain, extracellularInterproscan
IPR053243FamilySeptate junction maturation regulatorInterproscan
IPR039448DomainRight handed beta helix domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47653PROTEIN BARK BEETLEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan

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