Gene detail

Detailed information of XP_020606524.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_1714:614521...622032
NR annotation: XP_020606524.1, 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020750865.1

TGGAGCCCCCGATTTCTTTAAACCTTCTATTACTTGAAGCAATCTTTTGGTCCCATTAGCAAAAGAGAGCCAAAAAAAGTTAGGAGAAATTTATCCACATCCCTATATATCTCAAACCATTTTTCGTTTCTCTGAGAGGTTAGTGAAATTGGGAATCCATTGTATAACTCGAACTGACTTACTCTCTTGAGTATTTTttaggtttattttatttagttagttacaTACTAGCAAGGTGAGTGTCTTGCTTTGCAGAgtgctgaaatattttgttttaagtatGGTACAATATATCTTATAtaaatactattttttttattttattaatttttttatttttcatttttcatttttcatgacGCACCTGACTCGCATGGCTTGCACCCTGACTCACATGACTCACATGGCTCGCTGGCTTGCATATTAGTAAAACTCGTTGATGCTGTTGTATTGCAGGGGCCCGTACCATTAAGCCTTGACAAACTGGAAGGCACAAAGATTTTAAGTAGCTTGTTTTATATTCTAATAGTCCCTATGGTCAGGGTCCAGGAAACCCATTGGAAACTATTGGAGTGTTCTTGGTATCTTGAAACAATCACATGTTTCATCTGGTGGAGTCATCATAGTTTGCAGCCATTTTATACTGTCTGAGTTGCCTTAGGCCTTATTTATGTGGTCTTGGtcacccgagacaaccctccccccagGTTACCCTCCCCCCAGGTTACCTTCTCTtaatatttctttgcaaaattcaaccaactgTTTACAAGAGGATTGTGAACCCGTCTTGGGGGGTGAGACAACTCAGGTGGGTGAGTTGTCTCGCCttggcaggtagggtaaccctggcagatgggacaacttttcttcatataaacacttTGGCTTGCCTAACCGAGACAATTCTTGGCATGGCAAGTGTCATAAAATGTCTAGATTTAGGATTTGaagcagaaatttgtatcaaagaagtgaaaattaactccaCAACTCCCACTTTGATTGAATGACCGAGGAAAGCTAAAAAAAGGGATATTTGcgcatttgattattcaatgagggttatgaataatcatggggggtcaactttgactcggacTACAGAGACAACATTTTCACATACAAATGCTTCATAAAGTTGCCtcagggggagggttgtctTGGGTACCTGAGTCACTATAAGACTGATCAGTATGTCTTTTCAGGCTTCACTTTATCAAGTCACATACTTATCTCAAAGGTATCAGACAAATGGGAAATGGAAAACCTGAGTTTTTACATATACAaacttttacatgtagctgcaAGTACCTGACTATTGTGAaaacatataattattttattatagaGAGAATGAAGAGTGGAACAAACTCCATAAGGTCCTAGCACCTAAGATGTTACGTCCGGGAGATATTCTagaaaatcttgaaaagttaagcagTGTTGCAAGAGACGCTGTTGACCACATGATGACGTTAAGGGGTTTGAATGGAGAAATGCCTGACCTTGAAGGAGAAATTCCTAAATATGTTGCTGAATTTCTAGGTGCAGTGACACTTGATGTTAGGATTGGTTTGTATGATGACCCACCTAACAAGGAAACTCTCAAAATGCTTGAAGAGACCTGCaagttttttcctttcttgGAGAGATTCGGTGGACTCTGGGAGGGCCTTCTTCTTAGGTTTGGGCTCAGTTCAACAACATACAGAGAATTCTGCCAAACTGAAGATAATGCTATAGAAATTGGCCAGAAGATCGTGAACCAGAAGGTTAAGGAGCTTAGTGTAAATGGGGAGGAAgaatttgtagaaaatcaaGGTGAGTCCTTGCTGAGTTATCTCTTGACCAAGAGAAAGTTAACGCCGCAGGAGATAAACTTGAATTCTCTGGACATGCTTCGAGCAGGAATAAATACAACATCCACCATTTCTTTGTGGTTACTTTATGATCTGGCATGTCATCCAGAGGTGCAGGAGAAGATGTATGAAGAGGTCAGCAGTCTGATTGGTCCTCATGGTGATTTTACTCCCATGactttttcaaagttgaaataTGTCAAGGCTTGCATTAAAGAATCTTTGAGACTGCATTCTATTTCTGCTGGTTGGTCCCGTGTTGTTACTCAGGATGTGGTTTTATCTGGTTATCAAGTTCCAGCAGGTactGCTGTTAAATATCCAGATTATATGACTGGATACTCAGAAAGCCTGTTCAAAGACCCTGATGACTTTAAACCTGAGCGTTGGCTGAATGAGGACATGGGCAAGATCCAGCCTTTTGCTATTCTCCCATGGGGAGTGGGACCACGAATGTGCATTGGCGAGTATTTACAtagtctcatctaaacacgaggggagTTAGGATAGTTccagacagttatgcaaacccgagatgCAGTGTAGATCTAGCTTGAATACCGTAAAACCCCACcttaaagccctgggcttatacaacttcataaggggttttgggtgggcaTA

Protein

Uniprot

Uniprot term	Description
P48416	Cytochrome P450 10 OS=Lymnaea stagnalis OX=6523 GN=CYP10 PE=2 SV=1
Q9VE01	Probable cytochrome P450 12a5, mitochondrial OS=Drosophila melanogaster OX=7227 GN=Cyp12a5 PE=2 SV=1
Q9V8M2	Probable cytochrome P450 12b2, mitochondrial OS=Drosophila melanogaster OX=7227 GN=Cyp12b2 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00067	p450	Cytochrome P450	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050479	Family	Cytochrome P450, families 11 and 27	Interproscan
IPR036396	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR017972	Conserved_site	Cytochrome P450, conserved site	Interproscan
IPR002401	Family	Cytochrome P450, E-class, group I	Interproscan
IPR001128	Family	Cytochrome P450	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24279	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004497	Molecular Function	monooxygenase activity	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan