Gene detail

Detailed information of XP_020606802.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_1761:538223...542162
NR annotation: XP_020606802.1, cell death-inducing p53-target protein 1-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020751143.1

CATTCAGGTTCTTGTCACGAGACTGAAAGCAAGAGCGAAAGAGGAAATAAGTCATCTCCCGGAAAAAAGATATTGAGCAAGCTTCGACGACTCATGGAGGGAGGAGACACAAAACCTCCACCGTACAATTACGGTGCTATCCCAACAGATGCTGGTCATTCAGCACTACCACCATATACTGCTGGAGcgggATACCAGCAGACAGGAGGGAACCTTCCACCCCAGGCTTATCCCCAGCCTCGGCCTTATGTACCTCCTCCTAGAACCACGACAACCATCATTACACCACCAGGTCCAATTATTATGAACATGGCTTTTGGTGAGTGTCCGCTTAGCATGGTGTGTCCGCACTGCCAGACGCACATCATTACATGTACAACATATCAAGATGGGACCTTAACATGGCTTGCTGCTGGAGCTATTTGTCTTGTGGGGTAAATATCTCTttcaattttactttcattttagcAATTAGGATGTATAGTGTACAATTTTGTTGTGCACTTTAAAAAGTTGTGCAATTCAGATCGCAAGGGTTAAAGCTGGGGATACTATTTCCTGTTCTTGTTATAACTCCAATTACAGaccctctctccacccagcccagttgttcaaaagcatGATGACTCCAGGATTAGCATGGATTTTATTCTCAGACTAGTTTAAGAGGTTTTCAGTGACATAtctcttcatttttttctgtatttggtTTTGACATTGATTATGATCCTACCCTACAAGACAtatgtaacaacaacaaaaaccaatcttattcaaaagaaatgaaatacttAATTATCCTCTAATCCTGGATTAGGAAGTGTTGGTTATcttttgaacaaccaggcccaGTGGTATAAATGATTAGCAGTGAATTGTAATGGTaattcagggctcaaaaaaactGCCGTCCggttgtccaggacaagtagattttccttctgggcaagtagcttttcattctcacttgcccaatgggcaagggatcaggtaAGTTGTCTGCCATCTAAagcattaaaagagcaaactaagattTGCCCATggtaagcaaaatttgagagctacacTTTACTTGTCCCAAGtacaagctggaattcaagtttttttttttttgaacccTCGTGGGTAAACCATAGCAAAGTACAGAAGGGCTGGGTAATGACAGTAACCTGTTGTGAAGTAGCAAcccacttacatgtatgtaagggGCGTCAACAATTATTAATGACCAAGTTGGGTCTTACATATCCAAGAACTGGAATGAACTTAATCCTCTATGTTTACTGGTCATACATGCAGTAAATGCGGAGAAAGGACTGACTGAAGTGGACGATGAATAGTAAAATCTAAGACTCGTCAACATGCCAAGACCCTTGTTAGAAAATCCAAGACTGAGTCTGAAACAATTTTAGACTCCAAAGGCAAAAGGAACACACAAAATGAGACCTTGTGACTCATCTCAAATGCTGTTAAGATTTTGAGATCAGATCATTAATTGTCCCTGGATCCCAACCATTTGCCATCTCTAGAGGTGAAGTTCCATCCTGTTCAACTTGACTGACTGTATGATTGATATTTTATTAGCCTGTTCTGGGCGTTTGGTAAGTAGTCGCCTGGGAACTTGTATGAAGAATGAGTGGAAGAAACGTGATGGTCCCCCTTGCTCTTGCACAAACATTACAGAATCGTGCCCATTGAAAAACGACACACaggaaaatgcaaatgagcaaaaaaggAGACAGAGAGCATGCGTAAGGCCTGTCAATCAAGACCTTTCTCATGGCAATACCCATTGTAGGTCATTTTCATGAGTATTTGTTCTAGATCTGACTGCTCAAATTTTGCCCTATTCATCAGAGAAGAATAGAGGTAATTCTTAAGACAGTGTGTTTCATCAAATATAACTTATGCTGCTGGTAAGCAGAGATGTCagataatattttaatattctaGGGAAAAATTCTTGCTTTCACCACTTTTAATGTTAATTTgcaaattgatattttaaatcaaatgtGCACTTTATTATGTACAAAATCTTCTGGAAAGTTTTAAAGTACTCTGATATGTCTGAATTGGCTGGCATATGTTGATCAGTTGTTTACATTCTATGCAAATTTATCAGCTGGCAGCATGAGACCATGAAAGTTGAAATCGCCTTTTCAGTAAGGGGGTGAGGGCATGAAATACCACTGTCTGCTGTGTTTGCCAAATGTTGATCAAAAACATTCCTTTTGttgacaaaaatgttcaaacagTAGAATTTATGTTAGCAAGAGGATGgtttaaataaattacttaataTTGCCATTAAGCAAAGACATGTTGTATCACATTTCACTTTTCAATGCTTTGACAGCAAATATAACTCCTTTCGTTATTGTATTGTTGCTGCCTAGGTTGCTGTCAGTTCTAAACTAAGCAATGGATATGATTAAATATATTTGCTTTCAGAAGCAAGCATTTAGCACATTCGATCGGCGATGTTTAAGGGTCAAAAATGCTTCCATAACAAAGTCTGTCCTTCACATAAATCAGTAGTTTTACTTAAAAACACGAAGAGATGGCTAGATTTTCTCAAGGG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10601	zf-LITAF-like	LITAF-like zinc ribbon domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006629	Domain	LPS-induced tumour necrosis factor alpha factor	Interproscan
IPR037519	Family	LITAF domain containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23292	LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan