Gene detail

Detailed information of XP_020607152.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_1774:300188...305696
NR annotation: XP_020607152.1, G/T mismatch-specific thymine DNA glycosylase-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P56581	G/T mismatch-specific thymine DNA glycosylase OS=Mus musculus OX=10090 GN=Tdg PE=1 SV=2
Q13569	G/T mismatch-specific thymine DNA glycosylase OS=Homo sapiens OX=9606 GN=TDG PE=1 SV=2
C6DKG5	G/U mismatch-specific DNA glycosylase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) OX=561230 GN=mug PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03167	UDG	Uracil DNA glycosylase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015637	Family	Uracil DNA glycosylase family 2	Interproscan
IPR036895	Homologous_superfamily	Uracil-DNA glycosylase-like domain superfamily	Interproscan
IPR005122	Domain	Uracil-DNA glycosylase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12159	G/T AND G/U MISMATCH-SPECIFIC DNA GLYCOSYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000700	Molecular Function	mismatch base pair DNA N-glycosylase activity	Interproscan
GO:0006285	Biological Process	base-excision repair, AP site formation	Interproscan
GO:0004844	Molecular Function	uracil DNA N-glycosylase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0008263	Molecular Function	pyrimidine-specific mismatch base pair DNA N-glycosylase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20813	TDG; thymine-DNA glycosylase	EC:3.2.2.29	DNA repair and recombination proteins	ko03400	deepkoala