Detailed information of XP_020607165.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_1779:92878...100497
NR annotation: XP_020607165.1, tetratricopeptide repeat protein 39B-like [Orbicella faveolata]
Species abbreviation OFAVE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q28DB0Tetratricopeptide repeat protein 39B OS=Xenopus tropicalis OX=8364 GN=ttc39b PE=2 SV=1
Q5XHH9Tetratricopeptide repeat protein 39B OS=Xenopus laevis OX=8355 GN=ttc39b PE=2 SV=1
D3ZC96Tetratricopeptide repeat protein 39B OS=Rattus norvegicus OX=10116 GN=Ttc39b PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001963 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10300
all species →		Iml2-TPR_39Iml2/Tetratricopeptide repeat protein 39RepeatInterproscan
PF13181
all species →		TPR_8Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019412
all species →		FamilyInclusion body clearance protein Iml2/Tetratricopeptide repeat protein 39Interproscan
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31859
all species →		TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_020607165.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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