Gene detail

Detailed information of XP_020607273.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_1787:119346...133083
NR annotation: XP_020607272.1, jasmonate O-methyltransferase-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020751614.1

TAATCTTGACAACAGACACCTTGGATAACTGTCGTTCTGTACTAATGATCAAAAACTCAGTTTTGTCATCATTTAAGGACAGCGTATCATCCCTAATCCATATGCGAACCTCACGGATACAATTTTCAATCACAGTCACAACCTCAGCCTCACTGGAGTTATCAGCAAGATTAAACGAAATCTATAGCTGTGTATCATCCGCGTAGGTGTGAACGGATGGCAGATGGGATTTCAGAATATCAAACAACGGACTCGCGTAGATGATGAATAAGAGGGGGCCTAGGCACGAGCCCTGCGGGAGTCCAGGTTGAATTTCTCAGAAAGCGTTCCATTTACAGACCTGTCGCGTTCTTCCTGCTAAATAGGATTTAAACCATGATAAAGCCTTACCCCACAGTCCAAGCTTGATCTGCAGCCTGTTCAGAAGTATGCCATGGTCTACGATACCATTCGCTGCACTGAGATCTAATATGACAAGTAAGGTTACGTGACCCTTGTCCATATTTGTCCTTGTCCATATTCATTTTTGACTCTCAGTAACGCAGTCTCAGTGCTGTGATTTGGACGATACGTGCTCTGGAGATCTGGAAATAAGCTGTTGGCTGCCATCCATAAGATCTTGCATTTGGATAGCGACAGACTTTTCCACAATCTTGGACGTAACCTGCAAATTGCTCACAGGTCGAAAGTTTTTGTTGATAGGTTCAAGACCTGCTTTCTTGAGAAGAGGGTGTACTAAAGCGTTCTTCAAATCCTCTACAAAGACGCCAGATTCAAGACCCATTCAAGAGATAGGTCAATGATATTCGTAAGAACAGGGAGTAGTTTCCCTGCTCACCCTGGATGGAAGCTACACGCAAAATGAAGGGAAACTCTCATTTATAACGAGCCGTTCAAGTTCAGCGAGTTCACGAGAGAAACCGTATTGGTTTTCGGCTGCGTGACAGAGCTGCAAGCGTTGCGTGACCGAGAAGTTTGCGCAATGAATGATCTATGGTTATGCGCATAGGTAAGCCAGAGGATACCAATCAGAGTGGATCTCACATCTTGTACAACAATCGTCGGGCTCAGTTGCATAGAAGGCTTAGTTTCCAATCTACTGCAAGCAGGACTGAAGGAGGTCCCTGAGGCAAGCAGCGATTAAAGTTTGATTCTTGCCCATGATTTCCTTGCCGGTGAACTCTTTAACCCACGCCGTCTTTCTCAGGAGAAAGATCAGCTGAGTAAAAAGACAAAGTGGAACGCAGCAAAGAGGATGTCAACCAGCGAAAGTAAATTCGTTCCCCATAGTCACATCCTGCAATGCCCAGAAGGTTCTGGGTACTACTCAGACAATGAACTTGGCTGCTATGACGTGATCTTTGAGGCGGTGCCTCTTGTTTTGGACGTTATCAAGTCAGCCACCGTTGAGCCCGGATCCGTGTTCACCATTTGTGACTATGGTTGTGCTGATGGTGGTACTTCCATGACTTTACTTTACGCATGCGTGCAAGAGCTAAGGAAAATTCACGGCGATGATGTACCTCTGAGCGTGATTTATGAGGATCAACCAGTCAACGACTTCAAGTCTCTGTTTCTACGTTTGCAGGGTCTTATACCAGGTCCAAAAAGCTATTTTCTAGACTTCCCAAATGTTTTCGTCACGGCTTGTGGAACAAACTTCTTCGATGAATGCTTCCCCCCGCAGTCAGTTAATTTAGGATTTTCTTCCATGGCCTTTCACTGGTTGAGTAGAAAGCCGTGCGACATTACAGGAGCACTACACCAACCCATGATAACGGTTAAGGATGAGGCAGAGAAGTTCGAGGAACAAGCGGCGAAAGACTGGGAAACAATATTATTGGCAAGAGCAAAGGAGCTGGCCCCAGGAGGTAGACTTGTTATAGTGCAATCTGTCGTCAACGAAAAAGGGCATTACGAAGGAAAGGACACACCGGTCTCCAGACATCACACACTAAGAGACTTATGGCAAGGATTAGTAACTGACGGCTTGATTTCACAGGAAGAATTCCACGAAACAACATTCGCGTATTACTTACGCACAGCAGATAAATGCAAGATACCTTTTACATCCCGAGACTCGCCCGTTCGCAGGGCCGGCCTGTCTTTAGTCTCCATAGAAACCAAAACGGTGCCGTGCCCTTATAGGCAAAAATGGCTGAAACATGGTGGCGATCCTAAAGCGCATGCGCGTTGGTACGTTCCAGCCATGAGATCTTGGAGTAACTCGACATTTCTTTCTGGTCTCTCTGATAAACGAGCACCCGAAGAAAAACAAGCGATAGTCGACGAGTTGTTTGAACGGTACGAAAACGAGGTTGCTAAGTGCCCAGAGGATCATGGGATTGATCTTGTTTGTGCTTATATGTTGATTGAGAAGAGCAAAAAAGGAACATTAagctaaaagaaaatttattaatttcaagCGTGATTATGGCAATGACTGGAGAGAAAAACTATACCAAAAGAAACTTCCCGGCATCACTGGATCAGTTTATGTTGGTTTTCTTTCTAAGTGGCTAACAATACTTCAGTAATGGCTTCTACAAGAAACGCACTGTTTTTGTGAAATTGAACTATTGAATCACTGCACCAGGATGATGCGTGATTCAATGCGTGGGCCAAATCATTTGATGACAGAAAGTAGATTTACCATGCACGTTGTAGAAAACACTAGCTTTTGCTACATACGATCGGTCtgaggtttttttcttttacctgttTCCTGTGTGTTCATCATAGACGTTTATTTACTCGATAccaaaatatctttaaaaacgtttttatgGGTATATAAATAAAACTCCTGTTTATTTGATGGCACTGTTGTGGAAATTTCCATTCATTAGGTTTTTTTCACACTTAGTTGACAGAAAGACAGAGACAAACAGAAAGACAGAGaggcaaacagacagacagatagaaaaaatgtcaaattttaaTGAGAAGCCGTCCCTTCTACCAATTCATTAAGGCCGATCAGTCAGacttcagttttcaacaaagtgGAGATGAGAGAGACCCCAAATGCTTTTTTTACCAGCCTTTACTGGTATTTAATCAGTCGTGTTAAAGTTAGTTCAGTTTTTCATGActcttcttcaaaatgtcaagttatcaaaataaaattctctgcccttgaagaatttttcctgaccatttcctgacatGCGTCAACTAAACTACACCACaatattacgtttgatcatCGTTTGATCTATTGCAGCTTGAATCCTTGCTTGCAGCGGTTCCTtgtttgttcgtcacgcaatgctgtcgtcccattttagggggtaggggtacgacaatttctatcctaatacgTAAGGTTCCGTAAGGCTTGGAAaaacagggagcacacaatcttgttgaataggaggagattaaattaagcaatgaaaagTATGAATAGTTAACCATTGCCCGTGTTAACATCTTTTACTAGACCACCGCTAACTACACGCCCTGCATAATACCGTAACGCTAAACTCGTACTTAGgtcttttcgcgctgtgcaattACTTCTGGTTTACGtataatacagtgggctaccctcggggaaatgggaggtggccgcttaataggggttggccgcttaatagaggttggtgtaccttgaatattttttcactattGGGTTATAAATTTATTAGTTAACATGGAGACAATTCGAGACAATCATTACAGAcgtcatcctcggagacccaggggcagttagtgggaGCGGGGAAAAGTCTAAACGGCTGAGAAAAAAAGCTAGGGCGAAGACCCGTTTAGACTTTTTACCcgcccccactaactgcccctgggtctccaagaATGACGTCTATcattgtcttgaattgactccatgttccCTGAGAAATTTAGAAGGTTATCGAATTTAGAAGTGCACTTGTTCGAGATTCTGGCACATGTTACTT

Protein

Uniprot

Uniprot term	Description
Q9FKC8	Probable S-adenosylmethionine-dependent methyltransferase At5g37990 OS=Arabidopsis thaliana OX=3702 GN=At5g37990 PE=3 SV=2
Q9FKD0	Probable S-adenosylmethionine-dependent methyltransferase At5g37970 OS=Arabidopsis thaliana OX=3702 GN=At5g37970 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03492	Methyltransf_7	SAM dependent carboxyl methyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005299	Family	SAM dependent carboxyl methyltransferase	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR042086	Homologous_superfamily	Methyltransferase, alpha-helical capping domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31009	S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0008757	Molecular Function	S-adenosylmethionine-dependent methyltransferase activity	Interproscan
GO:0032259	Biological Process	methylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18886	GAMT2; gibberellin A4 carboxyl methyltransferase	EC:2.1.1.276	Enzymes with EC numbers	-	deepkoala