Detailed information of XP_020607936.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_1873:249301...283291
NR annotation: XP_020607936.1, LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 2 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7Z442Polycystin-1-like protein 2 OS=Homo sapiens OX=9606 GN=PKD1L2 PE=1 SV=5
Q7TN88Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1l2 PE=2 SV=1
Q2EG98Polycystin-1-like protein 3 OS=Mus musculus OX=10090 GN=Pkd1l3 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF02010REJREJ domainFamilyInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000601DomainPKD domainInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR014010DomainREJ domainInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46730POLYCYSTIN-1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan

TOP